RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 ZFAND3Q9H8U3 227 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 SPG11Q96JI7 2443 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 CUBNO60494 3623 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 PRRC2AP48634 2157 aaKnown RBP5.62□□□□□ -1.51
HDAC9-214ENST00000441542 RNASE3P12724 160 aaKnown RBP5.62□□□□□ -1.51
HDAC9-214ENST00000441542 RPL35AP18077 110 aaKnown RBP5.62□□□□□ -1.51
HDAC9-214ENST00000441542 UNQ9165/PRO28630Q6UXU0 137 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 C9orf47Q6ZRZ4 202 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 TMEM86BQ8N661 226 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 SMCR5Q8TEV8 140 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 CCDC140Q96MF4 163 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 DSCR8Q96T75 97 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 TMEM223A0PJW6 202 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 SDIM1Q6ZPB5 146 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 C3orf22Q8N5N4 141 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 NUP37Q8NFH4 326 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 Q9HAA7 133 aa5.62□□□□□ -1.51
HDAC9-214ENST00000441542 DCHS2Q6V1P9 2916 aa5.61□□□□□ -1.51
HDAC9-214ENST00000441542 IGHV3-38A0A0C4DH36 116 aa5.61□□□□□ -1.51
HDAC9-214ENST00000441542 FAM19A1Q7Z5A9 133 aa5.61□□□□□ -1.51
HDAC9-214ENST00000441542 LY6LH3BQJ8 138 aa5.61□□□□□ -1.51
HDAC9-214ENST00000441542 HRCT1Q6UXD1 115 aa5.61□□□□□ -1.51
HDAC9-214ENST00000441542 TMEM141Q96I45 108 aa5.61□□□□□ -1.51
HDAC9-214ENST00000441542 CYSTM1Q9H1C7 97 aa5.61□□□□□ -1.51
HDAC9-214ENST00000441542 RETNQ9HD89 108 aa5.61□□□□□ -1.51
HDAC9-214ENST00000441542 A0A087WVE0 104 aa5.6□□□□□ -1.51
HDAC9-214ENST00000441542 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-214ENST00000441542 PRM2P04554 102 aa5.6□□□□□ -1.51
HDAC9-214ENST00000441542 KAAG1Q9UBP8 84 aa5.6□□□□□ -1.51
HDAC9-214ENST00000441542 ZNF462Q96JM2 2506 aa5.6□□□□□ -1.51
HDAC9-214ENST00000441542 MUC4Q99102 2169 aa5.6□□□□□ -1.51
HDAC9-214ENST00000441542 ITPR1Q14643 2758 aa5.6□□□□□ -1.51
HDAC9-214ENST00000441542 TRBV30A0A0K0K1B3 111 aa5.6□□□□□ -1.51
HDAC9-214ENST00000441542 PROK1P58294 105 aa5.6□□□□□ -1.51
HDAC9-214ENST00000441542 IGHV4-4A0A075B6R2 117 aa5.59□□□□□ -1.51
HDAC9-214ENST00000441542 DAZ2Q13117 558 aaKnown RBP5.59□□□□□ -1.51
HDAC9-214ENST00000441542 C1orf195Q5TG92 126 aa5.59□□□□□ -1.51
HDAC9-214ENST00000441542 DAZ4Q86SG3 579 aaKnown RBP5.59□□□□□ -1.51
HDAC9-214ENST00000441542 Q8NA96 180 aa5.59□□□□□ -1.51
HDAC9-214ENST00000441542 DAZ1Q9NQZ3 744 aaKnown RBP5.59□□□□□ -1.51
HDAC9-214ENST00000441542 DAZ3Q9NR90 486 aaKnown RBP5.59□□□□□ -1.51
HDAC9-214ENST00000441542 IGSF10Q6WRI0 2623 aa5.59□□□□□ -1.51
HDAC9-214ENST00000441542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-214ENST00000441542 IGHV1-69DA0A0B4J2H0 117 aa5.59□□□□□ -1.51
HDAC9-214ENST00000441542 IGKV2-29A2NJV5 120 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-214ENST00000441542 H3BT86 120 aa5.59□□□□□ -1.51
HDAC9-214ENST00000441542 POLR2KP53803 58 aaKnown RBP5.59□□□□□ -1.51
HDAC9-214ENST00000441542 SYNJ2BPP57105 145 aa5.59□□□□□ -1.51
HDAC9-214ENST00000441542 C11orf44Q8N8P7 122 aa5.59□□□□□ -1.51
HDAC9-214ENST00000441542 RNF5Q99942 180 aa5.59□□□□□ -1.51
HDAC9-214ENST00000441542 CENPEQ02224 2701 aa5.59□□□□□ -1.51
HDAC9-214ENST00000441542 LST1O00453 97 aa5.59□□□□□ -1.52
HDAC9-214ENST00000441542 GRNP28799 593 aaKnown RBP5.59□□□□□ -1.52
HDAC9-214ENST00000441542 NPBQ8NG41 125 aa5.59□□□□□ -1.52
HDAC9-214ENST00000441542 TIMM17AQ99595 171 aa5.59□□□□□ -1.52
HDAC9-214ENST00000441542 IGLV4-3A0A075B6K6 122 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 UQCRQO14949 82 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 PPP1R17O96001 155 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 BAALC-AS2P0C853 105 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 LY6EQ16553 131 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 POM121L12Q8N7R1 296 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 Q8N9W7 124 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 HELZ2Q9BYK8 2649 aaKnown RBP5.58□□□□□ -1.52
HDAC9-214ENST00000441542 CSPG4Q6UVK1 2322 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 LINC00315P59091 139 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 C9orf139Q6ZV77 190 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 Q9UF83 564 aa5.58□□□□□ -1.52
HDAC9-214ENST00000441542 EBI3Q14213 229 aa5.57□□□□□ -1.52
HDAC9-214ENST00000441542 HIST1H4AP62805 103 aaKnown RBP5.57□□□□□ -1.52
HDAC9-214ENST00000441542 SPINK13Q1W4C9 94 aa5.57□□□□□ -1.52
HDAC9-214ENST00000441542 Q8N2B8 174 aa5.57□□□□□ -1.52
HDAC9-214ENST00000441542 IL17DQ8TAD2 202 aa5.57□□□□□ -1.52
HDAC9-214ENST00000441542 IGHV3-16A0A0C4DH30 117 aa5.57□□□□□ -1.52
HDAC9-214ENST00000441542 TRBV7-7A0A0K0K1E9 115 aa5.57□□□□□ -1.52
HDAC9-214ENST00000441542 TRACP01848 142 aa5.57□□□□□ -1.52
HDAC9-214ENST00000441542 TMEM61Q8N0U2 210 aa5.57□□□□□ -1.52
HDAC9-214ENST00000441542 C10orf105Q8TEF2 133 aa5.57□□□□□ -1.52
HDAC9-214ENST00000441542 TMEM190Q8WZ59 177 aa5.57□□□□□ -1.52
HDAC9-214ENST00000441542 CFAP46Q8IYW2 2715 aa5.56□□□□□ -1.52
HDAC9-214ENST00000441542 CIRBPQ14011 172 aaKnown RBP5.56□□□□□ -1.52
HDAC9-214ENST00000441542 C20orf203Q8NBC4 194 aa5.56□□□□□ -1.52
HDAC9-214ENST00000441542 LRRK2Q5S007 2527 aa5.56□□□□□ -1.52
HDAC9-214ENST00000441542 IGKV3OR2-268A0A0C4DH90 116 aa5.56□□□□□ -1.52
HDAC9-214ENST00000441542 MIAQ16674 131 aa5.56□□□□□ -1.52
HDAC9-214ENST00000441542 WFDC9Q8NEX5 89 aa5.56□□□□□ -1.52
HDAC9-214ENST00000441542 MRPL53Q96EL3 112 aaKnown RBP5.56□□□□□ -1.52
HDAC9-214ENST00000441542 KIF25-AS1Q9Y6Z4 181 aa5.56□□□□□ -1.52
HDAC9-214ENST00000441542 OVOL1O14753 267 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 LINC00643Q86TS7 51 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 LINC00526Q96FQ7 95 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 LITAFQ99732 161 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 RHPN1-AS1Q9BWJ2 59 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 SPANXDQ9BXN6 97 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 C14orf132Q9NPU4 83 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 PKIGQ9Y2B9 76 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 RNASE1P07998 156 aaKnown RBP5.55□□□□□ -1.52
HDAC9-214ENST00000441542 COX7CP15954 63 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 LY6G5BQ8NDX9 201 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 Q9H8V8 135 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 M0QY20 66 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms