RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 hDV102S1A0JD36 115 aa7.45□□□□□ -1.22
UBE2D4-204ENST00000440899 PANO1I0J062 215 aa7.45□□□□□ -1.22
UBE2D4-204ENST00000440899 NTF3P20783 257 aa7.45□□□□□ -1.22
UBE2D4-204ENST00000440899 MEF2BQ02080 365 aaPredicted RBP7.45□□□□□ -1.22
UBE2D4-204ENST00000440899 WDR73Q6P4I2 378 aa7.45□□□□□ -1.22
UBE2D4-204ENST00000440899 LYZL1Q6UWQ5 148 aa7.45□□□□□ -1.22
UBE2D4-204ENST00000440899 DPH3P1Q9H4G8 78 aa7.45□□□□□ -1.22
UBE2D4-204ENST00000440899 AP5S1Q9NUS5 200 aa7.45□□□□□ -1.22
UBE2D4-204ENST00000440899 IGHV3-64A0A075B6Q5 118 aa7.44□□□□□ -1.22
UBE2D4-204ENST00000440899 HNRNPA3P51991 378 aaKnown RBP7.44□□□□□ -1.22
UBE2D4-204ENST00000440899 CIRBPQ14011 172 aaKnown RBP7.44□□□□□ -1.22
UBE2D4-204ENST00000440899 COTL1Q14019 142 aa7.44□□□□□ -1.22
UBE2D4-204ENST00000440899 AKAP14Q86UN6 197 aa7.44□□□□□ -1.22
UBE2D4-204ENST00000440899 C9orf62Q8N4C0 152 aa7.44□□□□□ -1.22
UBE2D4-204ENST00000440899 MED9Q9NWA0 146 aa7.44□□□□□ -1.22
UBE2D4-204ENST00000440899 UBR4Q5T4S7 5183 aa7.43□□□□□ -1.22
UBE2D4-204ENST00000440899 TRBV20OR9-2A0A075B6H5 130 aa7.43□□□□□ -1.22
UBE2D4-204ENST00000440899 UBE2L6O14933 153 aa7.43□□□□□ -1.22
UBE2D4-204ENST00000440899 SULT1A2P50226 295 aa7.43□□□□□ -1.22
UBE2D4-204ENST00000440899 DPH3Q96FX2 82 aa7.43□□□□□ -1.22
UBE2D4-204ENST00000440899 RNF185Q96GF1 192 aa7.43□□□□□ -1.22
UBE2D4-204ENST00000440899 GFRA4Q9GZZ7 299 aa7.43□□□□□ -1.22
UBE2D4-204ENST00000440899 AMTP48728 403 aa7.42□□□□□ -1.22
UBE2D4-204ENST00000440899 NUDT10Q8NFP7 164 aa7.42□□□□□ -1.22
UBE2D4-204ENST00000440899 NUDT11Q96G61 164 aa7.42□□□□□ -1.22
UBE2D4-204ENST00000440899 PLA2G2DQ9UNK4 145 aa7.42□□□□□ -1.22
UBE2D4-204ENST00000440899 SLPIP03973 132 aa7.41□□□□□ -1.22
UBE2D4-204ENST00000440899 BCL2P10415 239 aa7.41□□□□□ -1.22
UBE2D4-204ENST00000440899 CTRLP40313 264 aa7.41□□□□□ -1.22
UBE2D4-204ENST00000440899 TWIST1Q15672 202 aa7.41□□□□□ -1.22
UBE2D4-204ENST00000440899 CFAP161Q6P656 301 aa7.41□□□□□ -1.22
UBE2D4-204ENST00000440899 CNFNQ9BYD5 112 aa7.41□□□□□ -1.22
UBE2D4-204ENST00000440899 A0A087WYN8 130 aa7.4□□□□□ -1.22
UBE2D4-204ENST00000440899 TAGLN2P37802 199 aaKnown RBP7.4□□□□□ -1.22
UBE2D4-204ENST00000440899 Q6ZRU5 148 aa7.4□□□□□ -1.22
UBE2D4-204ENST00000440899 SLC7A5P1Q8MH63 180 aa7.4□□□□□ -1.22
UBE2D4-204ENST00000440899 GATD1Q8NB37 220 aa7.4□□□□□ -1.22
UBE2D4-204ENST00000440899 GAGE12HA6NDE8 117 aa7.39□□□□□ -1.23
UBE2D4-204ENST00000440899 SMIM15Q7Z3B0 74 aa7.39□□□□□ -1.23
UBE2D4-204ENST00000440899 SPACA4Q8TDM5 124 aa7.39□□□□□ -1.23
UBE2D4-204ENST00000440899 RPP21Q9H633 154 aaKnown RBP7.39□□□□□ -1.23
UBE2D4-204ENST00000440899 TRAV26-2A0A0B4J265 109 aa7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 IGKV3OR2-268A0A0C4DH90 116 aa7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 NCR2O95944 276 aa7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 CHTF8P0CG12 524 aa7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 RPS10P46783 165 aaKnown RBP7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 AMMECR1LQ6DCA0 310 aa7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 TEX261Q6UWH6 196 aa7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 SLC51BQ86UW2 128 aa7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 C15orf56Q8N910 161 aa7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 OCC1Q8TAD7 63 aa7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 RNASE7Q9H1E1 156 aaKnown RBP7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 PLAC8Q9NZF1 115 aa7.38□□□□□ -1.23
UBE2D4-204ENST00000440899 H7C423 109 aa7.37□□□□□ -1.23
UBE2D4-204ENST00000440899 K7EN84 100 aa7.37□□□□□ -1.23
UBE2D4-204ENST00000440899 MT1HL1P0DM35 61 aa7.37□□□□□ -1.23
UBE2D4-204ENST00000440899 CHCHD10Q8WYQ3 142 aaPredicted RBP7.37□□□□□ -1.23
UBE2D4-204ENST00000440899 COX6A2Q02221 97 aa7.36□□□□□ -1.23
UBE2D4-204ENST00000440899 RNASEKQ6P5S7 137 aaKnown RBP7.36□□□□□ -1.23
UBE2D4-204ENST00000440899 TCTE3Q8IZS6 198 aa7.36□□□□□ -1.23
UBE2D4-204ENST00000440899 C7orf33Q8WU49 177 aa7.36□□□□□ -1.23
UBE2D4-204ENST00000440899 RPL39LQ96EH5 51 aaKnown RBP7.36□□□□□ -1.23
UBE2D4-204ENST00000440899 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.35□□□□□ -1.23
UBE2D4-204ENST00000440899 IGKV2-29A2NJV5 120 aaPredicted RBP7.35□□□□□ -1.23
UBE2D4-204ENST00000440899 SDHAF1A6NFY7 115 aa7.35□□□□□ -1.23
UBE2D4-204ENST00000440899 NDUFS6O75380 124 aaKnown RBP7.35□□□□□ -1.23
UBE2D4-204ENST00000440899 APCSP02743 223 aa7.35□□□□□ -1.23
UBE2D4-204ENST00000440899 FGF6P10767 208 aa7.35□□□□□ -1.23
UBE2D4-204ENST00000440899 FOXA3P55318 350 aaPredicted RBP7.35□□□□□ -1.23
UBE2D4-204ENST00000440899 HIGD2BQ4VC39 106 aa7.35□□□□□ -1.23
UBE2D4-204ENST00000440899 GTSF1Q8WW33 167 aa7.35□□□□□ -1.23
UBE2D4-204ENST00000440899 GVQW2A0A096LPI5 108 aaPredicted RBP7.34□□□□□ -1.23
UBE2D4-204ENST00000440899 A8MWL6 223 aa7.34□□□□□ -1.23
UBE2D4-204ENST00000440899 TMEM250H0YL14 139 aa7.34□□□□□ -1.23
UBE2D4-204ENST00000440899 PHOX2AO14813 284 aa7.34□□□□□ -1.23
UBE2D4-204ENST00000440899 GATCO43716 136 aaKnown RBP7.34□□□□□ -1.23
UBE2D4-204ENST00000440899 ZNF25P17030 456 aaPredicted RBP7.34□□□□□ -1.23
UBE2D4-204ENST00000440899 IFITM2Q01629 132 aa7.34□□□□□ -1.23
UBE2D4-204ENST00000440899 MAJINQ3KP22 176 aa7.34□□□□□ -1.23
UBE2D4-204ENST00000440899 PRSS3P2Q8NHM4 247 aa7.34□□□□□ -1.23
UBE2D4-204ENST00000440899 TNXBP22105 4242 aa7.33□□□□□ -1.24
UBE2D4-204ENST00000440899 TRBV6-5A0A0K0K1A5 114 aa7.33□□□□□ -1.24
UBE2D4-204ENST00000440899 LOC105371267A0A1B0GV96 52 aa7.33□□□□□ -1.24
UBE2D4-204ENST00000440899 I3L3M4 83 aa7.33□□□□□ -1.24
UBE2D4-204ENST00000440899 PMCHP20382 165 aa7.33□□□□□ -1.24
UBE2D4-204ENST00000440899 FOXI1Q12951 378 aa7.33□□□□□ -1.24
UBE2D4-204ENST00000440899 FAM231DQ6ZW35 169 aa7.33□□□□□ -1.24
UBE2D4-204ENST00000440899 OR5A1Q8NGJ0 315 aa7.33□□□□□ -1.24
UBE2D4-204ENST00000440899 TMEM101Q96IK0 257 aa7.33□□□□□ -1.24
UBE2D4-204ENST00000440899 BTF3L4Q96K17 158 aa7.33□□□□□ -1.24
UBE2D4-204ENST00000440899 IGKV2-24A0A0C4DH68 120 aa7.32□□□□□ -1.24
UBE2D4-204ENST00000440899 FAM231BA6NCW3 169 aa7.32□□□□□ -1.24
UBE2D4-204ENST00000440899 BLOC1S1P78537 153 aa7.32□□□□□ -1.24
UBE2D4-204ENST00000440899 PKIGQ9Y2B9 76 aa7.32□□□□□ -1.24
UBE2D4-204ENST00000440899 TMA7Q9Y2S6 64 aaKnown RBP7.32□□□□□ -1.24
UBE2D4-204ENST00000440899 ESDP10768 282 aa7.31□□□□□ -1.24
UBE2D4-204ENST00000440899 XCL1P47992 114 aa7.31□□□□□ -1.24
UBE2D4-204ENST00000440899 CT83Q5H943 113 aa7.31□□□□□ -1.24
UBE2D4-204ENST00000440899 STPG4Q8N801 248 aa7.31□□□□□ -1.24
UBE2D4-204ENST00000440899 BORCS7Q96B45 105 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms