RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CRYBA4P53673 196 aa6.65□□□□□ -1.34
HDAC6-209ENST00000440653 PMVKQ15126 192 aa6.65□□□□□ -1.34
HDAC6-209ENST00000440653 TAL2Q16559 108 aa6.65□□□□□ -1.34
HDAC6-209ENST00000440653 UFSP1Q6NVU6 142 aa6.65□□□□□ -1.34
HDAC6-209ENST00000440653 TMEM263Q8WUH6 116 aaKnown RBP6.65□□□□□ -1.34
HDAC6-209ENST00000440653 LINC01587Q99440 93 aa6.65□□□□□ -1.34
HDAC6-209ENST00000440653 TMEM208Q9BTX3 173 aa6.65□□□□□ -1.34
HDAC6-209ENST00000440653 JPT2Q9H910 190 aa6.65□□□□□ -1.34
HDAC6-209ENST00000440653 HHLA3Q9XRX5 114 aa6.65□□□□□ -1.34
HDAC6-209ENST00000440653 COX11Q9Y6N1 276 aa6.65□□□□□ -1.34
HDAC6-209ENST00000440653 IGIPA6NJ69 53 aa6.64□□□□□ -1.35
HDAC6-209ENST00000440653 CIDEAO60543 219 aa6.64□□□□□ -1.35
HDAC6-209ENST00000440653 LCE6AA0A183 80 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 ADARB2-AS1A8MUL3 147 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 NACAE9PAV3 2078 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 E9PLD3 99 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 RS1O15537 224 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 TSHBP01222 138 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 IGHV3-53P01767 116 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 PF4P02776 101 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 ZNF25P17030 456 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-209ENST00000440653 INSL3P51460 131 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 ZNF124Q15973 351 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 OXLD1Q5BKU9 147 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 C11orf44Q8N8P7 122 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 C16orf74Q96GX8 76 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 CHAC1Q9BUX1 264 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 PYGO1Q9Y3Y4 419 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 TNFRSF18Q9Y5U5 241 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 FRAS1Q86XX4 4008 aa6.63□□□□□ -1.35
HDAC6-209ENST00000440653 TRBV10-1A0A0K0K1A3 114 aa6.62□□□□□ -1.35
HDAC6-209ENST00000440653 PRSS29PA6NIE9 313 aa6.62□□□□□ -1.35
HDAC6-209ENST00000440653 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
HDAC6-209ENST00000440653 C3orf84H3BNL1 204 aa6.62□□□□□ -1.35
HDAC6-209ENST00000440653 SMAGPQ0VAQ4 97 aa6.62□□□□□ -1.35
HDAC6-209ENST00000440653 CFAP126Q5VTH2 177 aa6.62□□□□□ -1.35
HDAC6-209ENST00000440653 PCP2Q8IVA1 136 aa6.62□□□□□ -1.35
HDAC6-209ENST00000440653 C20orf203Q8NBC4 194 aa6.62□□□□□ -1.35
HDAC6-209ENST00000440653 RNASE8Q8TDE3 154 aaKnown RBP6.62□□□□□ -1.35
HDAC6-209ENST00000440653 SPANXA1Q9NS26 97 aa6.62□□□□□ -1.35
HDAC6-209ENST00000440653 TP73-AS1Q9UF72 201 aa6.62□□□□□ -1.35
HDAC6-209ENST00000440653 TRAV4A0A0B4J268 109 aa6.61□□□□□ -1.35
HDAC6-209ENST00000440653 K7EIL1 84 aa6.61□□□□□ -1.35
HDAC6-209ENST00000440653 HTN1P15515 57 aa6.61□□□□□ -1.35
HDAC6-209ENST00000440653 CASC10Q5T4H9 136 aa6.61□□□□□ -1.35
HDAC6-209ENST00000440653 NEGR1Q7Z3B1 354 aa6.61□□□□□ -1.35
HDAC6-209ENST00000440653 GTSCR1Q86UQ5 136 aa6.61□□□□□ -1.35
HDAC6-209ENST00000440653 NFE4Q86UQ8 179 aa6.61□□□□□ -1.35
HDAC6-209ENST00000440653 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
HDAC6-209ENST00000440653 TRBV25-1A0A075B6N4 114 aa6.6□□□□□ -1.35
HDAC6-209ENST00000440653 IGKV2D-26A0A0A0MRZ7 120 aa6.6□□□□□ -1.35
HDAC6-209ENST00000440653 DAZ2Q13117 558 aaKnown RBP6.6□□□□□ -1.35
HDAC6-209ENST00000440653 C1orf158Q8N1D5 194 aa6.6□□□□□ -1.35
HDAC6-209ENST00000440653 LINC00482Q8N8I6 264 aa6.6□□□□□ -1.35
HDAC6-209ENST00000440653 CST9LQ9H4G1 147 aa6.6□□□□□ -1.35
HDAC6-209ENST00000440653 MRPL16Q9NX20 251 aaKnown RBP6.6□□□□□ -1.35
HDAC6-209ENST00000440653 XCL2Q9UBD3 114 aa6.6□□□□□ -1.35
HDAC6-209ENST00000440653 MYMXA0A1B0GTQ4 84 aa6.59□□□□□ -1.35
HDAC6-209ENST00000440653 H3BRM9 83 aa6.59□□□□□ -1.35
HDAC6-209ENST00000440653 TAX1BP3O14907 124 aa6.59□□□□□ -1.35
HDAC6-209ENST00000440653 AZU1P20160 251 aa6.59□□□□□ -1.35
HDAC6-209ENST00000440653 RPL39P62891 51 aaKnown RBP6.59□□□□□ -1.35
HDAC6-209ENST00000440653 COTL1Q14019 142 aa6.59□□□□□ -1.35
HDAC6-209ENST00000440653 DEFB121Q5J5C9 76 aa6.59□□□□□ -1.35
HDAC6-209ENST00000440653 PRADC1Q9BSG0 188 aa6.59□□□□□ -1.35
HDAC6-209ENST00000440653 KIAA1109Q2LD37 5005 aa6.59□□□□□ -1.35
HDAC6-209ENST00000440653 IGLV4-3A0A075B6K6 122 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 TRGV1A0A0A0MS02 117 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 TRAV8-6A0A0B4J262 113 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 TMEM238LA0A1B0GVL6 79 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 A6NJY4 79 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 K7EQD1 137 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 C9orf66Q5T8R8 295 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 OR4C5Q8NGB2 326 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 TIMM21Q9BVV7 248 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 TM2D2Q9BX73 214 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 STARD9Q9P2P6 4700 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 STAB2Q8WWQ8 2551 aa6.58□□□□□ -1.36
HDAC6-209ENST00000440653 RPL36AP83881 106 aaKnown RBP6.57□□□□□ -1.36
HDAC6-209ENST00000440653 RRN3P1Q2M238 152 aa6.57□□□□□ -1.36
HDAC6-209ENST00000440653 DAZ4Q86SG3 579 aaKnown RBP6.57□□□□□ -1.36
HDAC6-209ENST00000440653 CEND1Q8N111 149 aa6.57□□□□□ -1.36
HDAC6-209ENST00000440653 RPL36ALQ969Q0 106 aaKnown RBP6.57□□□□□ -1.36
HDAC6-209ENST00000440653 DAZ3Q9NR90 486 aaKnown RBP6.57□□□□□ -1.36
HDAC6-209ENST00000440653 ABCA13Q86UQ4 5058 aa6.57□□□□□ -1.36
HDAC6-209ENST00000440653 SORL1Q92673 2214 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 IGHV3OR16-12A0A075B7B8 117 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 ZNF815PA8K554 130 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 P0DMU3 169 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 FAM231AP0DMU4 169 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 FAM231CP0DMU5 169 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 GCSHP23434 173 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 TCTAP57738 103 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 MRPS36P82909 103 aaKnown RBP6.56□□□□□ -1.36
HDAC6-209ENST00000440653 UBE2V1Q13404 147 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 VAMP3Q15836 100 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 PLEKHB2Q96CS7 222 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 AMELXQ99217 191 aa6.56□□□□□ -1.36
HDAC6-209ENST00000440653 VCX2Q9H322 139 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms