RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 GFRA4Q9GZZ7 299 aa10.85□□□□□ -0.67
COL16A1-204ENST00000440437 IGLV10-54A0A075B6I4 117 aa10.84□□□□□ -0.67
COL16A1-204ENST00000440437 J3QL48 77 aa10.84□□□□□ -0.67
COL16A1-204ENST00000440437 TWIST1Q15672 202 aa10.84□□□□□ -0.67
COL16A1-204ENST00000440437 PKHD1L1Q86WI1 4243 aa10.84□□□□□ -0.67
COL16A1-204ENST00000440437 LRP1Q07954 4544 aaKnown RBP10.83□□□□□ -0.68
COL16A1-204ENST00000440437 TRAV8-4A0A0B4J246 113 aa10.83□□□□□ -0.68
COL16A1-204ENST00000440437 GATD1Q8NB37 220 aa10.83□□□□□ -0.68
COL16A1-204ENST00000440437 GTSF1Q8WW33 167 aa10.83□□□□□ -0.68
COL16A1-204ENST00000440437 FAT3Q8TDW7 4589 aa10.82□□□□□ -0.68
COL16A1-204ENST00000440437 TRAV26-2A0A0B4J265 109 aa10.82□□□□□ -0.68
COL16A1-204ENST00000440437 TMEM250H0YL14 139 aa10.82□□□□□ -0.68
COL16A1-204ENST00000440437 COTL1Q14019 142 aa10.82□□□□□ -0.68
COL16A1-204ENST00000440437 ALKAL2Q6UX46 152 aa10.82□□□□□ -0.68
COL16A1-204ENST00000440437 CLRN3Q8NCR9 226 aa10.82□□□□□ -0.68
COL16A1-204ENST00000440437 LYPD6BQ8NI32 183 aa10.82□□□□□ -0.68
COL16A1-204ENST00000440437 AMTP48728 403 aa10.81□□□□□ -0.68
COL16A1-204ENST00000440437 AKAP14Q86UN6 197 aa10.81□□□□□ -0.68
COL16A1-204ENST00000440437 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.81□□□□□ -0.68
COL16A1-204ENST00000440437 PANO1I0J062 215 aa10.8□□□□□ -0.68
COL16A1-204ENST00000440437 UBE2L6O14933 153 aa10.8□□□□□ -0.68
COL16A1-204ENST00000440437 CNBPP62633 177 aaKnown RBP10.8□□□□□ -0.68
COL16A1-204ENST00000440437 BLOC1S1P78537 153 aa10.8□□□□□ -0.68
COL16A1-204ENST00000440437 FAM231DQ6ZW35 169 aa10.8□□□□□ -0.68
COL16A1-204ENST00000440437 SDIM1Q6ZPB5 146 aa10.79□□□□□ -0.68
COL16A1-204ENST00000440437 RPL39LQ96EH5 51 aaKnown RBP10.79□□□□□ -0.68
COL16A1-204ENST00000440437 GATCO43716 136 aaKnown RBP10.78□□□□□ -0.68
COL16A1-204ENST00000440437 FOXA3P55318 350 aaPredicted RBP10.78□□□□□ -0.68
COL16A1-204ENST00000440437 hDV102S1A0JD36 115 aa10.77□□□□□ -0.69
COL16A1-204ENST00000440437 NCR2O95944 276 aa10.77□□□□□ -0.69
COL16A1-204ENST00000440437 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.69
COL16A1-204ENST00000440437 CT83Q5H943 113 aa10.77□□□□□ -0.69
COL16A1-204ENST00000440437 hCG_2014768A0A024R1R8 64 aa10.76□□□□□ -0.69
COL16A1-204ENST00000440437 A8MWL6 223 aa10.76□□□□□ -0.69
COL16A1-204ENST00000440437 SLPIP03973 132 aa10.76□□□□□ -0.69
COL16A1-204ENST00000440437 RPL37AP61513 92 aaKnown RBP10.76□□□□□ -0.69
COL16A1-204ENST00000440437 SMIM15Q7Z3B0 74 aa10.76□□□□□ -0.69
COL16A1-204ENST00000440437 SDHAF1A6NFY7 115 aa10.75□□□□□ -0.69
COL16A1-204ENST00000440437 TEX261Q6UWH6 196 aa10.75□□□□□ -0.69
COL16A1-204ENST00000440437 C15orf56Q8N910 161 aa10.75□□□□□ -0.69
COL16A1-204ENST00000440437 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.74□□□□□ -0.69
COL16A1-204ENST00000440437 IGKV2-29A2NJV5 120 aaPredicted RBP10.74□□□□□ -0.69
COL16A1-204ENST00000440437 H7C423 109 aa10.74□□□□□ -0.69
COL16A1-204ENST00000440437 NDUFS6O75380 124 aaKnown RBP10.74□□□□□ -0.69
COL16A1-204ENST00000440437 APCSP02743 223 aa10.74□□□□□ -0.69
COL16A1-204ENST00000440437 CEBPGP53567 150 aa10.74□□□□□ -0.69
COL16A1-204ENST00000440437 AP5S1Q9NUS5 200 aa10.74□□□□□ -0.69
COL16A1-204ENST00000440437 TRBV6-5A0A0K0K1A5 114 aa10.73□□□□□ -0.69
COL16A1-204ENST00000440437 GAGE12HA6NDE8 117 aa10.73□□□□□ -0.69
COL16A1-204ENST00000440437 OXTP01178 125 aa10.73□□□□□ -0.69
COL16A1-204ENST00000440437 HNRNPA3P51991 378 aaKnown RBP10.73□□□□□ -0.69
COL16A1-204ENST00000440437 LINC01551Q86U37 167 aa10.73□□□□□ -0.69
COL16A1-204ENST00000440437 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
COL16A1-204ENST00000440437 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.72□□□□□ -0.69
COL16A1-204ENST00000440437 IGKV3OR2-268A0A0C4DH90 116 aa10.72□□□□□ -0.69
COL16A1-204ENST00000440437 GAS8-AS1O95177 125 aa10.72□□□□□ -0.69
COL16A1-204ENST00000440437 AMMECR1LQ6DCA0 310 aa10.72□□□□□ -0.69
COL16A1-204ENST00000440437 FAM210AQ96ND0 272 aa10.72□□□□□ -0.69
COL16A1-204ENST00000440437 SMIM7Q9BQ49 75 aa10.72□□□□□ -0.69
COL16A1-204ENST00000440437 FAM231BA6NCW3 169 aa10.71□□□□□ -0.69
COL16A1-204ENST00000440437 FGF6P10767 208 aa10.71□□□□□ -0.69
COL16A1-204ENST00000440437 RNASEKQ6P5S7 137 aaKnown RBP10.71□□□□□ -0.69
COL16A1-204ENST00000440437 TSKUQ8WUA8 353 aa10.71□□□□□ -0.69
COL16A1-204ENST00000440437 EIF5A2Q9GZV4 153 aaKnown RBP10.71□□□□□ -0.69
COL16A1-204ENST00000440437 HIGD1CA8MV81 97 aa10.7□□□□□ -0.7
COL16A1-204ENST00000440437 I3L3M4 83 aa10.7□□□□□ -0.7
COL16A1-204ENST00000440437 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
COL16A1-204ENST00000440437 SPACA4Q8TDM5 124 aa10.7□□□□□ -0.7
COL16A1-204ENST00000440437 CHCHD10Q8WYQ3 142 aaPredicted RBP10.7□□□□□ -0.7
COL16A1-204ENST00000440437 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
COL16A1-204ENST00000440437 A0A1B0GUT8 65 aa10.69□□□□□ -0.7
COL16A1-204ENST00000440437 TSHBP01222 138 aa10.69□□□□□ -0.7
COL16A1-204ENST00000440437 SRP19P09132 144 aaKnown RBP10.69□□□□□ -0.7
COL16A1-204ENST00000440437 CHTF8P0CG12 524 aa10.69□□□□□ -0.7
COL16A1-204ENST00000440437 ESDP10768 282 aa10.69□□□□□ -0.7
COL16A1-204ENST00000440437 CFAP161Q6P656 301 aa10.69□□□□□ -0.7
COL16A1-204ENST00000440437 BORCS7Q96B45 105 aa10.69□□□□□ -0.7
COL16A1-204ENST00000440437 RNF185Q96GF1 192 aa10.69□□□□□ -0.7
COL16A1-204ENST00000440437 OSTCQ9NRP0 149 aa10.69□□□□□ -0.7
COL16A1-204ENST00000440437 HMCN2Q8NDA2 5059 aa10.68□□□□□ -0.7
COL16A1-204ENST00000440437 ZNF727A8MUV8 499 aa10.68□□□□□ -0.7
COL16A1-204ENST00000440437 PMCHP20382 165 aa10.68□□□□□ -0.7
COL16A1-204ENST00000440437 HIGD2BQ4VC39 106 aa10.68□□□□□ -0.7
COL16A1-204ENST00000440437 OR5A1Q8NGJ0 315 aa10.68□□□□□ -0.7
COL16A1-204ENST00000440437 A0A087WYN8 130 aa10.67□□□□□ -0.7
COL16A1-204ENST00000440437 GVQW2A0A096LPI5 108 aaPredicted RBP10.67□□□□□ -0.7
COL16A1-204ENST00000440437 RAB4AP20338 218 aa10.67□□□□□ -0.7
COL16A1-204ENST00000440437 RPS10P46783 165 aaKnown RBP10.67□□□□□ -0.7
COL16A1-204ENST00000440437 POLR2KP53803 58 aaKnown RBP10.67□□□□□ -0.7
COL16A1-204ENST00000440437 FOXI1Q12951 378 aa10.67□□□□□ -0.7
COL16A1-204ENST00000440437 ST20Q9HBF5 79 aa10.67□□□□□ -0.7
COL16A1-204ENST00000440437 TMEM242Q9NWH2 141 aa10.67□□□□□ -0.7
COL16A1-204ENST00000440437 V9GYV3 84 aa10.67□□□□□ -0.7
COL16A1-204ENST00000440437 AMN1Q8IY45 258 aa10.66□□□□□ -0.7
COL16A1-204ENST00000440437 MRAP2Q96G30 205 aa10.66□□□□□ -0.7
COL16A1-204ENST00000440437 TRBV27A0A0K0K1C4 114 aa10.65□□□□□ -0.7
COL16A1-204ENST00000440437 MRPL52Q86TS9 123 aaKnown RBP10.65□□□□□ -0.7
COL16A1-204ENST00000440437 BTF3L4Q96K17 158 aa10.65□□□□□ -0.7
COL16A1-204ENST00000440437 PLAC8Q9NZF1 115 aa10.65□□□□□ -0.7
COL16A1-204ENST00000440437 LINC00959A0A1B0GUT2 108 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms