RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 LPAP08519 4548 aa12.77□□□□□ -0.37
TRIM39-210ENST00000440271 GVQW2A0A096LPI5 108 aaPredicted RBP12.76□□□□□ -0.37
TRIM39-210ENST00000440271 GIPP09681 153 aaPredicted RBP12.76□□□□□ -0.37
TRIM39-210ENST00000440271 AMTP48728 403 aa12.76□□□□□ -0.37
TRIM39-210ENST00000440271 Q6ZRP5 223 aa12.76□□□□□ -0.37
TRIM39-210ENST00000440271 CHCHD10Q8WYQ3 142 aaPredicted RBP12.76□□□□□ -0.37
TRIM39-210ENST00000440271 IGLC6P0CF74 106 aa12.75□□□□□ -0.37
TRIM39-210ENST00000440271 COTL1Q14019 142 aa12.75□□□□□ -0.37
TRIM39-210ENST00000440271 TMUB2Q71RG4 321 aa12.75□□□□□ -0.37
TRIM39-210ENST00000440271 FER1L6-AS1Q8NA97 138 aa12.74□□□□□ -0.37
TRIM39-210ENST00000440271 CYTL1Q9NRR1 136 aa12.74□□□□□ -0.37
TRIM39-210ENST00000440271 CACNG7P62955 275 aa12.73□□□□□ -0.37
TRIM39-210ENST00000440271 SFT2D1Q8WV19 159 aa12.73□□□□□ -0.37
TRIM39-210ENST00000440271 PFDN1O60925 122 aa12.72□□□□□ -0.37
TRIM39-210ENST00000440271 A0A1B0GV50 99 aa12.71□□□□□ -0.37
TRIM39-210ENST00000440271 MBD3L1Q8WWY6 194 aa12.71□□□□□ -0.37
TRIM39-210ENST00000440271 RPS20P60866 119 aaKnown RBP12.7□□□□□ -0.38
TRIM39-210ENST00000440271 FOXI1Q12951 378 aa12.7□□□□□ -0.38
TRIM39-210ENST00000440271 OR2D3Q8NGH3 330 aa12.7□□□□□ -0.38
TRIM39-210ENST00000440271 PKIGQ9Y2B9 76 aa12.7□□□□□ -0.38
TRIM39-210ENST00000440271 RPL35P42766 123 aaKnown RBP12.69□□□□□ -0.38
TRIM39-210ENST00000440271 AMMECR1LQ6DCA0 310 aa12.69□□□□□ -0.38
TRIM39-210ENST00000440271 TRGC1P0CF51 173 aa12.68□□□□□ -0.38
TRIM39-210ENST00000440271 LINC00526Q96FQ7 95 aa12.68□□□□□ -0.38
TRIM39-210ENST00000440271 FAM231BA6NCW3 169 aa12.67□□□□□ -0.38
TRIM39-210ENST00000440271 F2Z2F3 143 aa12.67□□□□□ -0.38
TRIM39-210ENST00000440271 NTF3P20783 257 aa12.67□□□□□ -0.38
TRIM39-210ENST00000440271 RNASEKQ6P5S7 137 aaKnown RBP12.67□□□□□ -0.38
TRIM39-210ENST00000440271 FAM213BQ8TBF2 198 aa12.67□□□□□ -0.38
TRIM39-210ENST00000440271 LYZL1Q6UWQ5 148 aa12.66□□□□□ -0.38
TRIM39-210ENST00000440271 KCNRGQ8N5I3 272 aa12.66□□□□□ -0.38
TRIM39-210ENST00000440271 CARD19Q96LW7 228 aa12.66□□□□□ -0.38
TRIM39-210ENST00000440271 C19orf71A6NCJ1 209 aa12.65□□□□□ -0.38
TRIM39-210ENST00000440271 ARPC5O15511 151 aa12.65□□□□□ -0.38
TRIM39-210ENST00000440271 Q6ZNX1 250 aa12.65□□□□□ -0.38
TRIM39-210ENST00000440271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.64□□□□□ -0.39
TRIM39-210ENST00000440271 IGKV2-29A2NJV5 120 aaPredicted RBP12.64□□□□□ -0.39
TRIM39-210ENST00000440271 G3V3Q6 166 aa12.64□□□□□ -0.39
TRIM39-210ENST00000440271 XCL1P47992 114 aa12.64□□□□□ -0.39
TRIM39-210ENST00000440271 IGHV1-58A0A0C4DH39 117 aa12.63□□□□□ -0.39
TRIM39-210ENST00000440271 XKRY2A2RUG3 117 aa12.63□□□□□ -0.39
TRIM39-210ENST00000440271 H7C423 109 aa12.63□□□□□ -0.39
TRIM39-210ENST00000440271 FGF6P10767 208 aa12.63□□□□□ -0.39
TRIM39-210ENST00000440271 CENPWQ5EE01 88 aa12.63□□□□□ -0.39
TRIM39-210ENST00000440271 GATD1Q8NB37 220 aa12.63□□□□□ -0.39
TRIM39-210ENST00000440271 TRAV26-2A0A0B4J265 109 aa12.62□□□□□ -0.39
TRIM39-210ENST00000440271 UMAD1C9J7I0 102 aa12.62□□□□□ -0.39
TRIM39-210ENST00000440271 NCR2O95944 276 aa12.62□□□□□ -0.39
TRIM39-210ENST00000440271 PTTG1IPP53801 180 aa12.62□□□□□ -0.39
TRIM39-210ENST00000440271 SYCNQ0VAF6 134 aa12.62□□□□□ -0.39
TRIM39-210ENST00000440271 OR5A1Q8NGJ0 315 aa12.62□□□□□ -0.39
TRIM39-210ENST00000440271 CCL25O15444 150 aa12.61□□□□□ -0.39
TRIM39-210ENST00000440271 IFNA1P01562 189 aa12.61□□□□□ -0.39
TRIM39-210ENST00000440271 ZNF664Q8N3J9 261 aa12.61□□□□□ -0.39
TRIM39-210ENST00000440271 C9orf62Q8N4C0 152 aa12.61□□□□□ -0.39
TRIM39-210ENST00000440271 C11orf52Q96A22 123 aa12.61□□□□□ -0.39
TRIM39-210ENST00000440271 LINC00959A0A1B0GUT2 108 aa12.6□□□□□ -0.39
TRIM39-210ENST00000440271 A0A1W2PNN7 141 aa12.6□□□□□ -0.39
TRIM39-210ENST00000440271 APCSP02743 223 aa12.6□□□□□ -0.39
TRIM39-210ENST00000440271 H2AFB1P0C5Y9 115 aa12.6□□□□□ -0.39
TRIM39-210ENST00000440271 GAGE2BQ13066 116 aa12.6□□□□□ -0.39
TRIM39-210ENST00000440271 ZNF561-AS1K7EIQ3 104 aa12.59□□□□□ -0.39
TRIM39-210ENST00000440271 TWIST1Q15672 202 aa12.59□□□□□ -0.39
TRIM39-210ENST00000440271 RPL39LQ96EH5 51 aaKnown RBP12.59□□□□□ -0.39
TRIM39-210ENST00000440271 PSORS1C2Q9UIG4 136 aa12.59□□□□□ -0.39
TRIM39-210ENST00000440271 RAB19A4D1S5 217 aa12.58□□□□□ -0.4
TRIM39-210ENST00000440271 ZNF25P17030 456 aaPredicted RBP12.58□□□□□ -0.4
TRIM39-210ENST00000440271 MUC2Q02817 5179 aa12.58□□□□□ -0.4
TRIM39-210ENST00000440271 LOC107984640A0A0U1RRK4 108 aa12.57□□□□□ -0.4
TRIM39-210ENST00000440271 MT-ND6P03923 174 aa12.57□□□□□ -0.4
TRIM39-210ENST00000440271 CTRLP40313 264 aa12.57□□□□□ -0.4
TRIM39-210ENST00000440271 CCL20P78556 96 aa12.57□□□□□ -0.4
TRIM39-210ENST00000440271 SMIM12Q96EX1 92 aa12.57□□□□□ -0.4
TRIM39-210ENST00000440271 BTF3L4Q96K17 158 aa12.57□□□□□ -0.4
TRIM39-210ENST00000440271 KRTAP9-2Q9BYQ4 174 aa12.57□□□□□ -0.4
TRIM39-210ENST00000440271 GNG4P50150 75 aa12.56□□□□□ -0.4
TRIM39-210ENST00000440271 PRR26Q8N8Z3 221 aa12.56□□□□□ -0.4
TRIM39-210ENST00000440271 TMEM101Q96IK0 257 aa12.56□□□□□ -0.4
TRIM39-210ENST00000440271 GNG13Q9P2W3 67 aa12.56□□□□□ -0.4
TRIM39-210ENST00000440271 SDHAF1A6NFY7 115 aa12.55□□□□□ -0.4
TRIM39-210ENST00000440271 CAMPP49913 170 aa12.55□□□□□ -0.4
TRIM39-210ENST00000440271 C1orf137Q5JT78 98 aa12.55□□□□□ -0.4
TRIM39-210ENST00000440271 CD164L2Q6UWJ8 174 aa12.55□□□□□ -0.4
TRIM39-210ENST00000440271 CNFNQ9BYD5 112 aa12.55□□□□□ -0.4
TRIM39-210ENST00000440271 MANBALQ9NQG1 85 aa12.55□□□□□ -0.4
TRIM39-210ENST00000440271 SS18Q15532 418 aa12.54□□□□□ -0.4
TRIM39-210ENST00000440271 ISOC2Q96AB3 205 aa12.54□□□□□ -0.4
TRIM39-210ENST00000440271 IGLV4-69A0A075B6H9 119 aa12.53□□□□□ -0.4
TRIM39-210ENST00000440271 C9orf116Q5BN46 136 aaPredicted RBP12.53□□□□□ -0.4
TRIM39-210ENST00000440271 NUDT10Q8NFP7 164 aa12.53□□□□□ -0.4
TRIM39-210ENST00000440271 NUDT11Q96G61 164 aa12.53□□□□□ -0.4
TRIM39-210ENST00000440271 SMLR1H3BR10 107 aa12.52□□□□□ -0.41
TRIM39-210ENST00000440271 BCL2P10415 239 aa12.52□□□□□ -0.41
TRIM39-210ENST00000440271 PMCHP20382 165 aa12.52□□□□□ -0.41
TRIM39-210ENST00000440271 BIN3Q9NQY0 253 aa12.52□□□□□ -0.41
TRIM39-210ENST00000440271 TRBV20OR9-2A0A075B6H5 130 aa12.51□□□□□ -0.41
TRIM39-210ENST00000440271 I3L3M4 83 aa12.51□□□□□ -0.41
TRIM39-210ENST00000440271 FOXA3P55318 350 aaPredicted RBP12.51□□□□□ -0.41
TRIM39-210ENST00000440271 ZNF345Q14585 488 aa12.51□□□□□ -0.41
TRIM39-210ENST00000440271 TEX261Q6UWH6 196 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms