RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 WDR73Q6P4I2 378 aa13.29□□□□□ -0.28
CPNE1-219ENST00000440240 C9orf62Q8N4C0 152 aa13.29□□□□□ -0.28
CPNE1-219ENST00000440240 PANO1I0J062 215 aa13.28□□□□□ -0.28
CPNE1-219ENST00000440240 COTL1Q14019 142 aa13.28□□□□□ -0.28
CPNE1-219ENST00000440240 DPH3Q96FX2 82 aa13.28□□□□□ -0.28
CPNE1-219ENST00000440240 IGHV3-64A0A075B6Q5 118 aa13.27□□□□□ -0.29
CPNE1-219ENST00000440240 SULT1A2P50226 295 aa13.27□□□□□ -0.29
CPNE1-219ENST00000440240 CIRBPQ14011 172 aaKnown RBP13.27□□□□□ -0.29
CPNE1-219ENST00000440240 HNRNPA3P51991 378 aaKnown RBP13.26□□□□□ -0.29
CPNE1-219ENST00000440240 GFRA4Q9GZZ7 299 aa13.26□□□□□ -0.29
CPNE1-219ENST00000440240 TRBV20OR9-2A0A075B6H5 130 aa13.25□□□□□ -0.29
CPNE1-219ENST00000440240 AMTP48728 403 aa13.25□□□□□ -0.29
CPNE1-219ENST00000440240 NUDT10Q8NFP7 164 aa13.25□□□□□ -0.29
CPNE1-219ENST00000440240 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
CPNE1-219ENST00000440240 RNF185Q96GF1 192 aa13.25□□□□□ -0.29
CPNE1-219ENST00000440240 PLA2G2DQ9UNK4 145 aa13.25□□□□□ -0.29
CPNE1-219ENST00000440240 TWIST1Q15672 202 aa13.24□□□□□ -0.29
CPNE1-219ENST00000440240 CFAP161Q6P656 301 aa13.24□□□□□ -0.29
CPNE1-219ENST00000440240 SLPIP03973 132 aa13.23□□□□□ -0.29
CPNE1-219ENST00000440240 BCL2P10415 239 aa13.23□□□□□ -0.29
CPNE1-219ENST00000440240 TAGLN2P37802 199 aaKnown RBP13.23□□□□□ -0.29
CPNE1-219ENST00000440240 CTRLP40313 264 aa13.23□□□□□ -0.29
CPNE1-219ENST00000440240 CNFNQ9BYD5 112 aa13.23□□□□□ -0.29
CPNE1-219ENST00000440240 PKHD1L1Q86WI1 4243 aa13.23□□□□□ -0.29
CPNE1-219ENST00000440240 UBR4Q5T4S7 5183 aa13.23□□□□□ -0.29
CPNE1-219ENST00000440240 Q6ZRU5 148 aa13.22□□□□□ -0.29
CPNE1-219ENST00000440240 A0A087WYN8 130 aa13.2□□□□□ -0.3
CPNE1-219ENST00000440240 SMIM15Q7Z3B0 74 aa13.2□□□□□ -0.3
CPNE1-219ENST00000440240 GATD1Q8NB37 220 aa13.2□□□□□ -0.3
CPNE1-219ENST00000440240 RPP21Q9H633 154 aaKnown RBP13.2□□□□□ -0.3
CPNE1-219ENST00000440240 GAGE12HA6NDE8 117 aa13.19□□□□□ -0.3
CPNE1-219ENST00000440240 AMMECR1LQ6DCA0 310 aa13.19□□□□□ -0.3
CPNE1-219ENST00000440240 NCR2O95944 276 aa13.18□□□□□ -0.3
CPNE1-219ENST00000440240 TEX261Q6UWH6 196 aa13.18□□□□□ -0.3
CPNE1-219ENST00000440240 SLC51BQ86UW2 128 aa13.18□□□□□ -0.3
CPNE1-219ENST00000440240 OCC1Q8TAD7 63 aa13.18□□□□□ -0.3
CPNE1-219ENST00000440240 SPACA4Q8TDM5 124 aa13.18□□□□□ -0.3
CPNE1-219ENST00000440240 RNASE7Q9H1E1 156 aaKnown RBP13.18□□□□□ -0.3
CPNE1-219ENST00000440240 TRAV26-2A0A0B4J265 109 aa13.17□□□□□ -0.3
CPNE1-219ENST00000440240 IGKV3OR2-268A0A0C4DH90 116 aa13.17□□□□□ -0.3
CPNE1-219ENST00000440240 H7C423 109 aa13.17□□□□□ -0.3
CPNE1-219ENST00000440240 CHTF8P0CG12 524 aa13.17□□□□□ -0.3
CPNE1-219ENST00000440240 RPS10P46783 165 aaKnown RBP13.17□□□□□ -0.3
CPNE1-219ENST00000440240 C15orf56Q8N910 161 aa13.17□□□□□ -0.3
CPNE1-219ENST00000440240 PLAC8Q9NZF1 115 aa13.16□□□□□ -0.3
CPNE1-219ENST00000440240 K7EN84 100 aa13.15□□□□□ -0.3
CPNE1-219ENST00000440240 CHCHD10Q8WYQ3 142 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-219ENST00000440240 APCSP02743 223 aa13.14□□□□□ -0.31
CPNE1-219ENST00000440240 COX6A2Q02221 97 aa13.14□□□□□ -0.31
CPNE1-219ENST00000440240 RNASEKQ6P5S7 137 aaKnown RBP13.14□□□□□ -0.31
CPNE1-219ENST00000440240 Q6ZNX1 250 aa13.14□□□□□ -0.31
CPNE1-219ENST00000440240 TCTE3Q8IZS6 198 aa13.14□□□□□ -0.31
CPNE1-219ENST00000440240 C7orf33Q8WU49 177 aa13.14□□□□□ -0.31
CPNE1-219ENST00000440240 NDUFS6O75380 124 aaKnown RBP13.13□□□□□ -0.31
CPNE1-219ENST00000440240 MT1HL1P0DM35 61 aa13.13□□□□□ -0.31
CPNE1-219ENST00000440240 GTSF1Q8WW33 167 aa13.13□□□□□ -0.31
CPNE1-219ENST00000440240 RPL39LQ96EH5 51 aaKnown RBP13.13□□□□□ -0.31
CPNE1-219ENST00000440240 SDHAF1A6NFY7 115 aa13.12□□□□□ -0.31
CPNE1-219ENST00000440240 FGF6P10767 208 aa13.12□□□□□ -0.31
CPNE1-219ENST00000440240 HIGD2BQ4VC39 106 aa13.12□□□□□ -0.31
CPNE1-219ENST00000440240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-219ENST00000440240 IGKV2-29A2NJV5 120 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-219ENST00000440240 A8MWL6 223 aa13.11□□□□□ -0.31
CPNE1-219ENST00000440240 ZNF25P17030 456 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-219ENST00000440240 PMCHP20382 165 aa13.11□□□□□ -0.31
CPNE1-219ENST00000440240 FOXA3P55318 350 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-219ENST00000440240 GVQW2A0A096LPI5 108 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-219ENST00000440240 TMEM250H0YL14 139 aa13.1□□□□□ -0.31
CPNE1-219ENST00000440240 I3L3M4 83 aa13.1□□□□□ -0.31
CPNE1-219ENST00000440240 PHOX2AO14813 284 aa13.1□□□□□ -0.31
CPNE1-219ENST00000440240 GATCO43716 136 aaKnown RBP13.1□□□□□ -0.31
CPNE1-219ENST00000440240 PRSS3P2Q8NHM4 247 aa13.1□□□□□ -0.31
CPNE1-219ENST00000440240 BTF3L4Q96K17 158 aa13.1□□□□□ -0.31
CPNE1-219ENST00000440240 FAM210AQ96ND0 272 aa13.1□□□□□ -0.31
CPNE1-219ENST00000440240 MAJINQ3KP22 176 aa13.09□□□□□ -0.31
CPNE1-219ENST00000440240 OR5A1Q8NGJ0 315 aa13.09□□□□□ -0.31
CPNE1-219ENST00000440240 TMEM101Q96IK0 257 aa13.09□□□□□ -0.31
CPNE1-219ENST00000440240 TRBV6-5A0A0K0K1A5 114 aa13.08□□□□□ -0.32
CPNE1-219ENST00000440240 FAM231DQ6ZW35 169 aa13.08□□□□□ -0.32
CPNE1-219ENST00000440240 IGKV2-24A0A0C4DH68 120 aa13.07□□□□□ -0.32
CPNE1-219ENST00000440240 FOXI1Q12951 378 aa13.07□□□□□ -0.32
CPNE1-219ENST00000440240 BORCS7Q96B45 105 aa13.07□□□□□ -0.32
CPNE1-219ENST00000440240 FAM231BA6NCW3 169 aa13.06□□□□□ -0.32
CPNE1-219ENST00000440240 BLOC1S1P78537 153 aa13.06□□□□□ -0.32
CPNE1-219ENST00000440240 CT83Q5H943 113 aa13.06□□□□□ -0.32
CPNE1-219ENST00000440240 STPG4Q8N801 248 aa13.06□□□□□ -0.32
CPNE1-219ENST00000440240 LINC00474Q9P2X8 69 aa13.06□□□□□ -0.32
CPNE1-219ENST00000440240 PKIGQ9Y2B9 76 aa13.06□□□□□ -0.32
CPNE1-219ENST00000440240 LINC00959A0A1B0GUT2 108 aa13.05□□□□□ -0.32
CPNE1-219ENST00000440240 XCL1P47992 114 aa13.05□□□□□ -0.32
CPNE1-219ENST00000440240 ST20Q9HBF5 79 aa13.05□□□□□ -0.32
CPNE1-219ENST00000440240 ESDP10768 282 aa13.04□□□□□ -0.32
CPNE1-219ENST00000440240 MRAP2Q96G30 205 aa13.04□□□□□ -0.32
CPNE1-219ENST00000440240 IGHV1-58A0A0C4DH39 117 aa13.03□□□□□ -0.32
CPNE1-219ENST00000440240 CCL25O15444 150 aa13.03□□□□□ -0.32
CPNE1-219ENST00000440240 SS18Q15532 418 aa13.02□□□□□ -0.33
CPNE1-219ENST00000440240 LYPD6BQ8NI32 183 aa13.02□□□□□ -0.33
CPNE1-219ENST00000440240 TMEM191AQ9H0A3 160 aa13.02□□□□□ -0.33
CPNE1-219ENST00000440240 A0A096LNI7 61 aa13.01□□□□□ -0.33
CPNE1-219ENST00000440240 A0A1B0GUT8 65 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms