RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 AMTP48728 403 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 Q0VG73 95 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 GAGE6Q13070 117 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 ATRAIDQ6UW56 229 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 RMI2Q96E14 147 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 BTF3L4Q96K17 158 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 TMEM70Q9BUB7 260 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 COX11Q9Y6N1 276 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 A0A087WTM6 91 aa7.9□□□□□ -1.14
HSPG2-206ENST00000439717 A0A1B0GUV1 79 aa7.9□□□□□ -1.14
HSPG2-206ENST00000439717 UBE2L6O14933 153 aa7.9□□□□□ -1.14
HSPG2-206ENST00000439717 APCSP02743 223 aa7.9□□□□□ -1.14
HSPG2-206ENST00000439717 POLR2KP53803 58 aaKnown RBP7.9□□□□□ -1.14
HSPG2-206ENST00000439717 RBX1P62877 108 aa7.9□□□□□ -1.14
HSPG2-206ENST00000439717 NRACQ8N912 160 aa7.9□□□□□ -1.14
HSPG2-206ENST00000439717 CARHSP1Q9Y2V2 147 aaKnown RBP7.9□□□□□ -1.14
HSPG2-206ENST00000439717 TRBV27A0A0K0K1C4 114 aa7.89□□□□□ -1.15
HSPG2-206ENST00000439717 SMKR1H3BMG3 65 aa7.89□□□□□ -1.15
HSPG2-206ENST00000439717 H7C423 109 aa7.89□□□□□ -1.15
HSPG2-206ENST00000439717 VCYO14598 125 aa7.89□□□□□ -1.15
HSPG2-206ENST00000439717 PPBPP02775 128 aa7.89□□□□□ -1.15
HSPG2-206ENST00000439717 ANGP03950 147 aaKnown RBP7.89□□□□□ -1.15
HSPG2-206ENST00000439717 CKS2P33552 79 aa7.89□□□□□ -1.15
HSPG2-206ENST00000439717 Q8N976 141 aa7.89□□□□□ -1.15
HSPG2-206ENST00000439717 UBE2WQ96B02 151 aa7.89□□□□□ -1.15
HSPG2-206ENST00000439717 TMEM242Q9NWH2 141 aa7.89□□□□□ -1.15
HSPG2-206ENST00000439717 PKHD1P08F94 4074 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 DNAH11Q96DT5 4516 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 BIRC6Q9NR09 4857 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 TRBV24-1A0A075B6N3 115 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 TRAV9-1A0A075B6T8 112 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 CRPP02741 224 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 SUMO2P61956 95 aaKnown RBP7.88□□□□□ -1.15
HSPG2-206ENST00000439717 ENHOQ6UWT2 76 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 SPATA12Q7Z6I5 190 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 DEFB104AQ8WTQ1 72 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 C20orf78Q9BR46 151 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 PRR34Q9NV39 138 aa7.88□□□□□ -1.15
HSPG2-206ENST00000439717 IGKV2D-24A0A075B6R9 120 aa7.87□□□□□ -1.15
HSPG2-206ENST00000439717 LRCOL1A6NCL2 159 aa7.87□□□□□ -1.15
HSPG2-206ENST00000439717 PHOX2AO14813 284 aa7.87□□□□□ -1.15
HSPG2-206ENST00000439717 TSHBP01222 138 aa7.87□□□□□ -1.15
HSPG2-206ENST00000439717 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
HSPG2-206ENST00000439717 RHEBQ15382 184 aa7.87□□□□□ -1.15
HSPG2-206ENST00000439717 MIAQ16674 131 aa7.87□□□□□ -1.15
HSPG2-206ENST00000439717 PGPEP1Q9NXJ5 209 aa7.87□□□□□ -1.15
HSPG2-206ENST00000439717 C7orf77A4D0Y5 90 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 D6R8Y8 96 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 TNFRSF6BO95407 300 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 ESDP10768 282 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 S100PP25815 95 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 ORMDL3Q8N138 153 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 LINC00269Q8N2A0 174 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 C20orf203Q8NBC4 194 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 CLRN3Q8NCR9 226 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 KIR2DL4Q99706 377 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 C1orf43Q9BWL3 253 aa7.86□□□□□ -1.15
HSPG2-206ENST00000439717 IGLV4-60A0A075B6I1 120 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 C16orf90A8MZG2 172 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 TCAPO15273 167 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 ZNF25P17030 456 aaPredicted RBP7.85□□□□□ -1.15
HSPG2-206ENST00000439717 FCER1GP30273 86 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 KRTAP10-2P60368 255 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 REG3AQ06141 175 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 NDUFA5Q16718 116 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 AMMECR1LQ6DCA0 310 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 CDPF1Q6NVV7 123 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 TMEM136Q6ZRR5 245 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 LAMTOR2Q9Y2Q5 125 aa7.85□□□□□ -1.15
HSPG2-206ENST00000439717 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.84□□□□□ -1.15
HSPG2-206ENST00000439717 IGKV2-29A2NJV5 120 aaPredicted RBP7.84□□□□□ -1.15
HSPG2-206ENST00000439717 FGF6P10767 208 aa7.84□□□□□ -1.15
HSPG2-206ENST00000439717 SVBPQ8N300 66 aa7.84□□□□□ -1.15
HSPG2-206ENST00000439717 PRELID3AQ96N28 172 aa7.84□□□□□ -1.15
HSPG2-206ENST00000439717 RPS10P5Q9NQ39 176 aa7.84□□□□□ -1.15
HSPG2-206ENST00000439717 TRAV8-4A0A0B4J246 113 aa7.83□□□□□ -1.16
HSPG2-206ENST00000439717 NPYP01303 97 aa7.83□□□□□ -1.16
HSPG2-206ENST00000439717 SMAGPQ0VAQ4 97 aa7.83□□□□□ -1.16
HSPG2-206ENST00000439717 RNASEKQ6P5S7 137 aaKnown RBP7.83□□□□□ -1.16
HSPG2-206ENST00000439717 Q8N814 137 aa7.83□□□□□ -1.16
HSPG2-206ENST00000439717 MAPKAPK5-AS1Q8N8E1 139 aa7.83□□□□□ -1.16
HSPG2-206ENST00000439717 NTN5Q8WTR8 489 aaPredicted RBP7.83□□□□□ -1.16
HSPG2-206ENST00000439717 TMEM101Q96IK0 257 aa7.83□□□□□ -1.16
HSPG2-206ENST00000439717 SMIM2Q9BVW6 85 aa7.83□□□□□ -1.16
HSPG2-206ENST00000439717 PRSS47A8MTI9 375 aa7.82□□□□□ -1.16
HSPG2-206ENST00000439717 SNAPINO95295 136 aa7.82□□□□□ -1.16
HSPG2-206ENST00000439717 APOC3P02656 99 aa7.82□□□□□ -1.16
HSPG2-206ENST00000439717 COX19Q49B96 90 aa7.82□□□□□ -1.16
HSPG2-206ENST00000439717 CLPSL2Q6UWE3 100 aa7.82□□□□□ -1.16
HSPG2-206ENST00000439717 MRPL52Q86TS9 123 aaKnown RBP7.82□□□□□ -1.16
HSPG2-206ENST00000439717 BAALCQ8WXS3 180 aa7.82□□□□□ -1.16
HSPG2-206ENST00000439717 OR5A1Q8NGJ0 315 aa7.81□□□□□ -1.16
HSPG2-206ENST00000439717 TMEM18Q96B42 140 aa7.81□□□□□ -1.16
HSPG2-206ENST00000439717 GNB1LQ9BYB4 327 aa7.81□□□□□ -1.16
HSPG2-206ENST00000439717 DYNC1H1Q14204 4646 aaKnown RBP7.81□□□□□ -1.16
HSPG2-206ENST00000439717 HLA-DQA1P01909 254 aa7.8□□□□□ -1.16
HSPG2-206ENST00000439717 WFDC2Q14508 124 aa7.8□□□□□ -1.16
HSPG2-206ENST00000439717 KRTAP26-1Q6PEX3 210 aa7.8□□□□□ -1.16
HSPG2-206ENST00000439717 MAP1LC3AQ9H492 121 aa7.8□□□□□ -1.16
HSPG2-206ENST00000439717 CSDC2Q9Y534 153 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms