RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 JPT2Q9H910 190 aa11.86□□□□□ -0.51
DHFR-201ENST00000439211 SPENQ96T58 3664 aaKnown RBP11.86□□□□□ -0.51
DHFR-201ENST00000439211 I3L3M4 83 aa11.86□□□□□ -0.51
DHFR-201ENST00000439211 BAALC-AS2P0C853 105 aa11.86□□□□□ -0.51
DHFR-201ENST00000439211 RHPN1-AS1Q9BWJ2 59 aa11.86□□□□□ -0.51
DHFR-201ENST00000439211 DPH3Q96FX2 82 aa11.86□□□□□ -0.51
DHFR-201ENST00000439211 GNLYP22749 145 aa11.85□□□□□ -0.51
DHFR-201ENST00000439211 CIRBPQ14011 172 aaKnown RBP11.85□□□□□ -0.51
DHFR-201ENST00000439211 KHDC1LQ5JSQ8 128 aa11.85□□□□□ -0.51
DHFR-201ENST00000439211 Q8N6K4 173 aa11.85□□□□□ -0.51
DHFR-201ENST00000439211 A0A0J9YXV3 536 aa11.85□□□□□ -0.51
DHFR-201ENST00000439211 NDUFA12Q9UI09 145 aa11.85□□□□□ -0.51
DHFR-201ENST00000439211 PIEZO1Q92508 2521 aa11.85□□□□□ -0.51
DHFR-201ENST00000439211 INAFM2P0DMQ5 153 aa11.85□□□□□ -0.51
DHFR-201ENST00000439211 DAND5Q8N907 189 aa11.85□□□□□ -0.51
DHFR-201ENST00000439211 A0A0U1RQV1 116 aa11.84□□□□□ -0.51
DHFR-201ENST00000439211 SDHAF1A6NFY7 115 aa11.84□□□□□ -0.51
DHFR-201ENST00000439211 CSMD1Q96PZ7 3565 aa11.84□□□□□ -0.51
DHFR-201ENST00000439211 EBI3Q14213 229 aa11.84□□□□□ -0.51
DHFR-201ENST00000439211 POLQO75417 2590 aa11.84□□□□□ -0.51
DHFR-201ENST00000439211 IGHV1-69DA0A0B4J2H0 117 aa11.83□□□□□ -0.52
DHFR-201ENST00000439211 DAZ2Q13117 558 aaKnown RBP11.83□□□□□ -0.52
DHFR-201ENST00000439211 DAZ4Q86SG3 579 aaKnown RBP11.83□□□□□ -0.52
DHFR-201ENST00000439211 DAZ1Q9NQZ3 744 aaKnown RBP11.83□□□□□ -0.52
DHFR-201ENST00000439211 DAZ3Q9NR90 486 aaKnown RBP11.83□□□□□ -0.52
DHFR-201ENST00000439211 A0A1W2PPR1 153 aa11.83□□□□□ -0.52
DHFR-201ENST00000439211 LST1O00453 97 aa11.83□□□□□ -0.52
DHFR-201ENST00000439211 RPL35AP18077 110 aaKnown RBP11.83□□□□□ -0.52
DHFR-201ENST00000439211 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
DHFR-201ENST00000439211 J3QLI3 93 aa11.83□□□□□ -0.52
DHFR-201ENST00000439211 C5orf56Q8N8D9 126 aa11.83□□□□□ -0.52
DHFR-201ENST00000439211 ZNRF2Q8NHG8 242 aa11.83□□□□□ -0.52
DHFR-201ENST00000439211 ZNF625Q96I27 306 aaPredicted RBP11.83□□□□□ -0.52
DHFR-201ENST00000439211 PRRC2AP48634 2157 aaKnown RBP11.83□□□□□ -0.52
DHFR-201ENST00000439211 C11orf71Q6IPW1 123 aa11.82□□□□□ -0.52
DHFR-201ENST00000439211 TINCRA0A1B0GVN0 87 aa11.82□□□□□ -0.52
DHFR-201ENST00000439211 POM121L12Q8N7R1 296 aa11.82□□□□□ -0.52
DHFR-201ENST00000439211 IGLV4-69A0A075B6H9 119 aa11.82□□□□□ -0.52
DHFR-201ENST00000439211 CLPSL1A2RUU4 121 aa11.82□□□□□ -0.52
DHFR-201ENST00000439211 CRYGAP11844 174 aa11.82□□□□□ -0.52
DHFR-201ENST00000439211 PFN2P35080 140 aa11.82□□□□□ -0.52
DHFR-201ENST00000439211 BLCAPP62952 87 aa11.82□□□□□ -0.52
DHFR-201ENST00000439211 TMEM243Q9BU79 118 aa11.82□□□□□ -0.52
DHFR-201ENST00000439211 TMEM223A0PJW6 202 aa11.81□□□□□ -0.52
DHFR-201ENST00000439211 WFDC11Q8NEX6 87 aa11.81□□□□□ -0.52
DHFR-201ENST00000439211 FAM223BA6NKX1 122 aa11.81□□□□□ -0.52
DHFR-201ENST00000439211 PRR9Q5T870 116 aa11.81□□□□□ -0.52
DHFR-201ENST00000439211 C9orf47Q6ZRZ4 202 aa11.81□□□□□ -0.52
DHFR-201ENST00000439211 FAM223AQ8IWN6 122 aa11.81□□□□□ -0.52
DHFR-201ENST00000439211 CD28P10747 220 aa11.81□□□□□ -0.52
DHFR-201ENST00000439211 C20orf173Q96LM9 149 aa11.81□□□□□ -0.52
DHFR-201ENST00000439211 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
DHFR-201ENST00000439211 SERP2Q8N6R1 65 aa11.8□□□□□ -0.52
DHFR-201ENST00000439211 IGHV1-69P01742 117 aa11.8□□□□□ -0.52
DHFR-201ENST00000439211 CCL19Q99731 98 aa11.8□□□□□ -0.52
DHFR-201ENST00000439211 CRYGDP07320 174 aa11.8□□□□□ -0.52
DHFR-201ENST00000439211 LMO4P61968 165 aa11.8□□□□□ -0.52
DHFR-201ENST00000439211 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
DHFR-201ENST00000439211 TRAV12-2A0A075B6T6 113 aa11.79□□□□□ -0.52
DHFR-201ENST00000439211 PYGO1Q9Y3Y4 419 aa11.79□□□□□ -0.52
DHFR-201ENST00000439211 IGHV4-38-2P0DP08 117 aa11.79□□□□□ -0.52
DHFR-201ENST00000439211 RNASE13Q5GAN3 156 aaKnown RBP11.79□□□□□ -0.52
DHFR-201ENST00000439211 CENPEQ02224 2701 aa11.78□□□□□ -0.52
DHFR-201ENST00000439211 BRK1Q8WUW1 75 aa11.78□□□□□ -0.52
DHFR-201ENST00000439211 V9GYY9 64 aa11.78□□□□□ -0.52
DHFR-201ENST00000439211 A0A087WVE0 104 aa11.78□□□□□ -0.52
DHFR-201ENST00000439211 HOXD3P31249 432 aaPredicted RBP11.78□□□□□ -0.52
DHFR-201ENST00000439211 DGAT2L7PQ6IED9 249 aa11.78□□□□□ -0.52
DHFR-201ENST00000439211 NDUFA4O00483 81 aa11.77□□□□□ -0.52
DHFR-201ENST00000439211 IGHV3-30-3P0DP02 117 aa11.77□□□□□ -0.52
DHFR-201ENST00000439211 MRPL53Q96EL3 112 aaKnown RBP11.77□□□□□ -0.52
DHFR-201ENST00000439211 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.53
DHFR-201ENST00000439211 TIMM17AQ99595 171 aa11.77□□□□□ -0.53
DHFR-201ENST00000439211 COX8CQ7Z4L0 72 aa11.77□□□□□ -0.53
DHFR-201ENST00000439211 ZNF580Q9UK33 172 aa11.77□□□□□ -0.53
DHFR-201ENST00000439211 NXPH4O95158 308 aa11.76□□□□□ -0.53
DHFR-201ENST00000439211 ZNF876PQ49A33 203 aa11.76□□□□□ -0.53
DHFR-201ENST00000439211 CXCL5P42830 114 aa11.76□□□□□ -0.53
DHFR-201ENST00000439211 SNRPD3P62318 126 aaKnown RBP11.76□□□□□ -0.53
DHFR-201ENST00000439211 C20orf197Q8N268 126 aa11.76□□□□□ -0.53
DHFR-201ENST00000439211 PRO0628Q9UI54 55 aa11.76□□□□□ -0.53
DHFR-201ENST00000439211 ZFYVE26Q68DK2 2539 aa11.76□□□□□ -0.53
DHFR-201ENST00000439211 IGHV3-73A0A0B4J1V6 119 aa11.75□□□□□ -0.53
DHFR-201ENST00000439211 SMCR5Q8TEV8 140 aa11.75□□□□□ -0.53
DHFR-201ENST00000439211 USMG5Q96IX5 58 aa11.75□□□□□ -0.53
DHFR-201ENST00000439211 RBMY1BA6NDE4 496 aaKnown RBP11.75□□□□□ -0.53
DHFR-201ENST00000439211 RBMY1EA6NEQ0 496 aaKnown RBP11.75□□□□□ -0.53
DHFR-201ENST00000439211 RBMY1DP0C7P1 496 aaKnown RBP11.75□□□□□ -0.53
DHFR-201ENST00000439211 RBMY1A1P0DJD3 496 aaKnown RBP11.75□□□□□ -0.53
DHFR-201ENST00000439211 RBMY1CP0DJD4 496 aa11.75□□□□□ -0.53
DHFR-201ENST00000439211 TIRAPP58753 221 aa11.75□□□□□ -0.53
DHFR-201ENST00000439211 RBMY1FQ15415 496 aaKnown RBP11.75□□□□□ -0.53
DHFR-201ENST00000439211 KLK9Q9UKQ9 250 aa11.75□□□□□ -0.53
DHFR-201ENST00000439211 COL12A1Q99715 3063 aa11.75□□□□□ -0.53
DHFR-201ENST00000439211 FAM19A4Q96LR4 140 aa11.75□□□□□ -0.53
DHFR-201ENST00000439211 USP17L23D6RBM5 183 aa11.74□□□□□ -0.53
DHFR-201ENST00000439211 NAV2Q8IVL1 2488 aa11.74□□□□□ -0.53
DHFR-201ENST00000439211 ZFAND2AQ8N6M9 145 aa11.74□□□□□ -0.53
DHFR-201ENST00000439211 Q9HAA7 133 aa11.74□□□□□ -0.53
DHFR-201ENST00000439211 MALP21145 153 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms