RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 TM2D2Q9BX73 214 aa8.75□□□□□ -1.01
LINC00399-201ENST00000439008 PRR34Q9NV39 138 aa8.75□□□□□ -1.01
LINC00399-201ENST00000439008 TRBV6-5A0A0K0K1A5 114 aa8.74□□□□□ -1.01
LINC00399-201ENST00000439008 SDHAF1A6NFY7 115 aa8.74□□□□□ -1.01
LINC00399-201ENST00000439008 EREGO14944 169 aa8.74□□□□□ -1.01
LINC00399-201ENST00000439008 CDK2AP2O75956 126 aa8.74□□□□□ -1.01
LINC00399-201ENST00000439008 ADCYAP1P18509 176 aa8.74□□□□□ -1.01
LINC00399-201ENST00000439008 RIGQ13278 110 aa8.74□□□□□ -1.01
LINC00399-201ENST00000439008 LINC00269Q8N2A0 174 aa8.74□□□□□ -1.01
LINC00399-201ENST00000439008 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.74□□□□□ -1.01
LINC00399-201ENST00000439008 BORCS7Q96B45 105 aa8.74□□□□□ -1.01
LINC00399-201ENST00000439008 A0A1B0GXF2 115 aa8.73□□□□□ -1.01
LINC00399-201ENST00000439008 POLR2KP53803 58 aaKnown RBP8.73□□□□□ -1.01
LINC00399-201ENST00000439008 COTL1Q14019 142 aa8.73□□□□□ -1.01
LINC00399-201ENST00000439008 CDPF1Q6NVV7 123 aa8.73□□□□□ -1.01
LINC00399-201ENST00000439008 KCNIP4Q6PIL6 250 aa8.73□□□□□ -1.01
LINC00399-201ENST00000439008 NRACQ8N912 160 aa8.73□□□□□ -1.01
LINC00399-201ENST00000439008 TMEM70Q9BUB7 260 aa8.73□□□□□ -1.01
LINC00399-201ENST00000439008 TSHBP01222 138 aa8.72□□□□□ -1.01
LINC00399-201ENST00000439008 AMTP48728 403 aa8.72□□□□□ -1.01
LINC00399-201ENST00000439008 CAMPP49913 170 aa8.72□□□□□ -1.01
LINC00399-201ENST00000439008 XGP55808 180 aa8.72□□□□□ -1.01
LINC00399-201ENST00000439008 ELOBQ15370 118 aa8.72□□□□□ -1.01
LINC00399-201ENST00000439008 MRPL51Q4U2R6 128 aaKnown RBP8.72□□□□□ -1.01
LINC00399-201ENST00000439008 FAM104BQ5XKR9 115 aa8.72□□□□□ -1.01
LINC00399-201ENST00000439008 MRPL54Q6P161 138 aaKnown RBP8.72□□□□□ -1.01
LINC00399-201ENST00000439008 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
LINC00399-201ENST00000439008 A0A1B0GUV1 79 aa8.71□□□□□ -1.02
LINC00399-201ENST00000439008 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
LINC00399-201ENST00000439008 Q0VG73 95 aa8.71□□□□□ -1.02
LINC00399-201ENST00000439008 NTN5Q8WTR8 489 aaPredicted RBP8.71□□□□□ -1.02
LINC00399-201ENST00000439008 MRAP2Q96G30 205 aa8.71□□□□□ -1.02
LINC00399-201ENST00000439008 IGLV5-52A0A0A0MRZ9 124 aa8.7□□□□□ -1.02
LINC00399-201ENST00000439008 PKIAP61925 76 aa8.7□□□□□ -1.02
LINC00399-201ENST00000439008 ST20Q9HBF5 79 aa8.7□□□□□ -1.02
LINC00399-201ENST00000439008 TMEM242Q9NWH2 141 aa8.7□□□□□ -1.02
LINC00399-201ENST00000439008 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
LINC00399-201ENST00000439008 IGLV10-54A0A075B6I4 117 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.69□□□□□ -1.02
LINC00399-201ENST00000439008 TRBV27A0A0K0K1C4 114 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 I3L3M4 83 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 ESDP10768 282 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 PMCHP20382 165 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 GCSHP23434 173 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 HAMPP81172 84 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 REG3AQ06141 175 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 MIAQ16674 131 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 LINC01620Q4KN68 170 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 RMI2Q96E14 147 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 C1orf43Q9BWL3 253 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 COX11Q9Y6N1 276 aa8.69□□□□□ -1.02
LINC00399-201ENST00000439008 TMEM218A2RU14 115 aa8.68□□□□□ -1.02
LINC00399-201ENST00000439008 CRPP02741 224 aa8.68□□□□□ -1.02
LINC00399-201ENST00000439008 DNAH8Q96JB1 4490 aa8.68□□□□□ -1.02
LINC00399-201ENST00000439008 FAT1Q14517 4588 aa8.68□□□□□ -1.02
LINC00399-201ENST00000439008 UBE2L6O14933 153 aa8.67□□□□□ -1.02
LINC00399-201ENST00000439008 HLA-DQA1P01909 254 aa8.67□□□□□ -1.02
LINC00399-201ENST00000439008 APCSP02743 223 aa8.67□□□□□ -1.02
LINC00399-201ENST00000439008 FGF6P10767 208 aa8.67□□□□□ -1.02
LINC00399-201ENST00000439008 HBBP68871 147 aa8.67□□□□□ -1.02
LINC00399-201ENST00000439008 PNRC1Q12796 327 aaPredicted RBP8.67□□□□□ -1.02
LINC00399-201ENST00000439008 A0A1B0GW15 77 aa8.66□□□□□ -1.02
LINC00399-201ENST00000439008 USP17L23D6RBM5 183 aa8.66□□□□□ -1.02
LINC00399-201ENST00000439008 PPP1R2P9O14990 202 aa8.66□□□□□ -1.02
LINC00399-201ENST00000439008 SUMO2P61956 95 aaKnown RBP8.66□□□□□ -1.02
LINC00399-201ENST00000439008 UQCC3Q6UW78 93 aa8.66□□□□□ -1.02
LINC00399-201ENST00000439008 COMMD7Q86VX2 200 aa8.66□□□□□ -1.02
LINC00399-201ENST00000439008 ABCA13Q86UQ4 5058 aa8.65□□□□□ -1.02
LINC00399-201ENST00000439008 TRBV24-1A0A075B6N3 115 aa8.65□□□□□ -1.02
LINC00399-201ENST00000439008 D6R8Y8 96 aa8.65□□□□□ -1.02
LINC00399-201ENST00000439008 NPYP01303 97 aa8.65□□□□□ -1.02
LINC00399-201ENST00000439008 MT-ND4LP03901 98 aa8.65□□□□□ -1.02
LINC00399-201ENST00000439008 PRSS1P07477 247 aa8.65□□□□□ -1.02
LINC00399-201ENST00000439008 ANAPC16Q96DE5 110 aa8.65□□□□□ -1.02
LINC00399-201ENST00000439008 LINC00862A6NCI5 91 aa8.64□□□□□ -1.03
LINC00399-201ENST00000439008 F8W036 122 aa8.64□□□□□ -1.03
LINC00399-201ENST00000439008 TNFRSF6BO95407 300 aa8.64□□□□□ -1.03
LINC00399-201ENST00000439008 CKS2P33552 79 aa8.64□□□□□ -1.03
LINC00399-201ENST00000439008 RNASEKQ6P5S7 137 aaKnown RBP8.64□□□□□ -1.03
LINC00399-201ENST00000439008 ATP5L2Q7Z4Y8 100 aa8.64□□□□□ -1.03
LINC00399-201ENST00000439008 PCLOQ9Y6V0 5065 aa8.63□□□□□ -1.03
LINC00399-201ENST00000439008 IGKV3OR2-268A0A0C4DH90 116 aa8.63□□□□□ -1.03
LINC00399-201ENST00000439008 H7C423 109 aa8.63□□□□□ -1.03
LINC00399-201ENST00000439008 VCYO14598 125 aa8.63□□□□□ -1.03
LINC00399-201ENST00000439008 AMMECR1LQ6DCA0 310 aa8.63□□□□□ -1.03
LINC00399-201ENST00000439008 Q8N1X5 172 aa8.63□□□□□ -1.03
LINC00399-201ENST00000439008 SRRM2Q9UQ35 2752 aaKnown RBP8.62□□□□□ -1.03
LINC00399-201ENST00000439008 TRAV8-4A0A0B4J246 113 aa8.62□□□□□ -1.03
LINC00399-201ENST00000439008 C10orf91Q5T1B1 145 aa8.62□□□□□ -1.03
LINC00399-201ENST00000439008 Q6ZSA8 131 aa8.62□□□□□ -1.03
LINC00399-201ENST00000439008 MRPL52Q86TS9 123 aaKnown RBP8.62□□□□□ -1.03
LINC00399-201ENST00000439008 FAM104AQ969W3 186 aa8.62□□□□□ -1.03
LINC00399-201ENST00000439008 C20orf78Q9BR46 151 aa8.62□□□□□ -1.03
LINC00399-201ENST00000439008 SEC11CQ9BY50 192 aa8.62□□□□□ -1.03
LINC00399-201ENST00000439008 C7orf77A4D0Y5 90 aa8.61□□□□□ -1.03
LINC00399-201ENST00000439008 PPP1R17O96001 155 aa8.61□□□□□ -1.03
LINC00399-201ENST00000439008 SLPIP03973 132 aa8.61□□□□□ -1.03
LINC00399-201ENST00000439008 S100A8P05109 93 aa8.61□□□□□ -1.03
LINC00399-201ENST00000439008 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
LINC00399-201ENST00000439008 SMIM2Q9BVW6 85 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms