RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 SIRPDQ9H106 197 aa13.35□□□□□ -0.27
KCNC4-204ENST00000438661 EDA2RQ9HAV5 297 aa13.35□□□□□ -0.27
KCNC4-204ENST00000438661 NRGNQ92686 78 aa13.35□□□□□ -0.27
KCNC4-204ENST00000438661 LINC01600Q96MT4 127 aa13.35□□□□□ -0.27
KCNC4-204ENST00000438661 RHOHQ15669 191 aa13.34□□□□□ -0.27
KCNC4-204ENST00000438661 FAM19A4Q96LR4 140 aa13.34□□□□□ -0.27
KCNC4-204ENST00000438661 NOTCH3Q9UM47 2321 aa13.34□□□□□ -0.27
KCNC4-204ENST00000438661 TRBV6-5A0A0K0K1A5 114 aa13.33□□□□□ -0.28
KCNC4-204ENST00000438661 IGHV1-58A0A0C4DH39 117 aa13.33□□□□□ -0.28
KCNC4-204ENST00000438661 A0A1W2PPR1 153 aa13.33□□□□□ -0.28
KCNC4-204ENST00000438661 DNAJC30Q96LL9 226 aa13.33□□□□□ -0.28
KCNC4-204ENST00000438661 UBTD1Q9HAC8 227 aa13.33□□□□□ -0.28
KCNC4-204ENST00000438661 IGF2RP11717 2491 aa13.33□□□□□ -0.28
KCNC4-204ENST00000438661 PROK1P58294 105 aa13.32□□□□□ -0.28
KCNC4-204ENST00000438661 DEFB121Q5J5C9 76 aa13.31□□□□□ -0.28
KCNC4-204ENST00000438661 UQCRQO14949 82 aa13.31□□□□□ -0.28
KCNC4-204ENST00000438661 DAZ2Q13117 558 aaKnown RBP13.31□□□□□ -0.28
KCNC4-204ENST00000438661 DAZ4Q86SG3 579 aaKnown RBP13.31□□□□□ -0.28
KCNC4-204ENST00000438661 DAZ1Q9NQZ3 744 aaKnown RBP13.31□□□□□ -0.28
KCNC4-204ENST00000438661 DAZ3Q9NR90 486 aaKnown RBP13.31□□□□□ -0.28
KCNC4-204ENST00000438661 KLLNB2CW77 178 aa13.3□□□□□ -0.28
KCNC4-204ENST00000438661 FAM19A5Q7Z5A7 132 aaPredicted RBP13.3□□□□□ -0.28
KCNC4-204ENST00000438661 VSIG2Q96IQ7 327 aa13.3□□□□□ -0.28
KCNC4-204ENST00000438661 SPANXDQ9BXN6 97 aa13.3□□□□□ -0.28
KCNC4-204ENST00000438661 SPANXCQ9NY87 97 aa13.3□□□□□ -0.28
KCNC4-204ENST00000438661 VPS13CQ709C8 3753 aa13.3□□□□□ -0.28
KCNC4-204ENST00000438661 Q9UF83 564 aa13.3□□□□□ -0.28
KCNC4-204ENST00000438661 IGHV3-16A0A0C4DH30 117 aa13.29□□□□□ -0.28
KCNC4-204ENST00000438661 GAGE2AQ6NT46 116 aa13.29□□□□□ -0.28
KCNC4-204ENST00000438661 KNCNA6PVL3 124 aa13.29□□□□□ -0.28
KCNC4-204ENST00000438661 PF4V1P10720 104 aa13.29□□□□□ -0.28
KCNC4-204ENST00000438661 KLRB1Q12918 225 aa13.29□□□□□ -0.28
KCNC4-204ENST00000438661 C5orf56Q8N8D9 126 aa13.29□□□□□ -0.28
KCNC4-204ENST00000438661 CITED2Q99967 270 aaPredicted RBP13.29□□□□□ -0.28
KCNC4-204ENST00000438661 SPINK13Q1W4C9 94 aa13.29□□□□□ -0.28
KCNC4-204ENST00000438661 LINC00643Q86TS7 51 aa13.29□□□□□ -0.28
KCNC4-204ENST00000438661 APRG1Q8IVJ8 170 aa13.29□□□□□ -0.28
KCNC4-204ENST00000438661 CRYBG3Q68DQ2 2970 aa13.29□□□□□ -0.28
KCNC4-204ENST00000438661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.28□□□□□ -0.28
KCNC4-204ENST00000438661 IGKV2-29A2NJV5 120 aaPredicted RBP13.28□□□□□ -0.28
KCNC4-204ENST00000438661 NDUFA4O00483 81 aa13.28□□□□□ -0.28
KCNC4-204ENST00000438661 MRPS36P82909 103 aaKnown RBP13.28□□□□□ -0.28
KCNC4-204ENST00000438661 hADV29S1A0JD25 119 aa13.27□□□□□ -0.28
KCNC4-204ENST00000438661 Q8N2B8 174 aa13.27□□□□□ -0.28
KCNC4-204ENST00000438661 LY6EQ16553 131 aa13.27□□□□□ -0.29
KCNC4-204ENST00000438661 DCANP1Q8TF63 244 aa13.27□□□□□ -0.29
KCNC4-204ENST00000438661 IMUPQ9GZP8 106 aa13.27□□□□□ -0.29
KCNC4-204ENST00000438661 ACYP1P07311 99 aa13.26□□□□□ -0.29
KCNC4-204ENST00000438661 BAALC-AS2P0C853 105 aa13.26□□□□□ -0.29
KCNC4-204ENST00000438661 FAM104AQ969W3 186 aa13.26□□□□□ -0.29
KCNC4-204ENST00000438661 LINC00526Q96FQ7 95 aa13.26□□□□□ -0.29
KCNC4-204ENST00000438661 TRAV13-1A0A0B4J241 112 aa13.26□□□□□ -0.29
KCNC4-204ENST00000438661 IGHV3-38A0A0C4DH36 116 aa13.26□□□□□ -0.29
KCNC4-204ENST00000438661 PRM2P04554 102 aa13.26□□□□□ -0.29
KCNC4-204ENST00000438661 NBL1P41271 181 aa13.26□□□□□ -0.29
KCNC4-204ENST00000438661 FAM223BA6NKX1 122 aa13.25□□□□□ -0.29
KCNC4-204ENST00000438661 FAM223AQ8IWN6 122 aa13.25□□□□□ -0.29
KCNC4-204ENST00000438661 CDKN2A-AS1Q9UH64 79 aa13.25□□□□□ -0.29
KCNC4-204ENST00000438661 J3KT08 172 aa13.25□□□□□ -0.29
KCNC4-204ENST00000438661 HOXD3P31249 432 aaPredicted RBP13.25□□□□□ -0.29
KCNC4-204ENST00000438661 Q9HAA7 133 aa13.25□□□□□ -0.29
KCNC4-204ENST00000438661 SMIM9A6NGZ8 99 aa13.24□□□□□ -0.29
KCNC4-204ENST00000438661 KLK9Q2XQG4 91 aa13.24□□□□□ -0.29
KCNC4-204ENST00000438661 C9orf85Q96MD7 179 aa13.24□□□□□ -0.29
KCNC4-204ENST00000438661 CSPG4Q6UVK1 2322 aa13.24□□□□□ -0.29
KCNC4-204ENST00000438661 C5orf47Q569G3 176 aa13.24□□□□□ -0.29
KCNC4-204ENST00000438661 BRD3OSQ6XYD6 125 aa13.24□□□□□ -0.29
KCNC4-204ENST00000438661 TIRAPP58753 221 aa13.23□□□□□ -0.29
KCNC4-204ENST00000438661 SDIM1Q6ZPB5 146 aa13.23□□□□□ -0.29
KCNC4-204ENST00000438661 BPESC1Q9GZL8 116 aa13.23□□□□□ -0.29
KCNC4-204ENST00000438661 CYSTM1Q9H1C7 97 aa13.23□□□□□ -0.29
KCNC4-204ENST00000438661 SPG11Q96JI7 2443 aa13.22□□□□□ -0.29
KCNC4-204ENST00000438661 CSMD2Q7Z408 3487 aa13.22□□□□□ -0.29
KCNC4-204ENST00000438661 COX7CP15954 63 aa13.22□□□□□ -0.29
KCNC4-204ENST00000438661 Q9H8V8 135 aa13.22□□□□□ -0.29
KCNC4-204ENST00000438661 IGHV1OR15-1A0A075B7D0 117 aa13.22□□□□□ -0.29
KCNC4-204ENST00000438661 COX7A2LO14548 114 aa13.22□□□□□ -0.29
KCNC4-204ENST00000438661 LMO4P61968 165 aa13.22□□□□□ -0.29
KCNC4-204ENST00000438661 CIRBPQ14011 172 aaKnown RBP13.22□□□□□ -0.29
KCNC4-204ENST00000438661 LINC00308Q8TCZ7 52 aa13.21□□□□□ -0.29
KCNC4-204ENST00000438661 IGHG2P01859 326 aa13.2□□□□□ -0.3
KCNC4-204ENST00000438661 LY6DQ14210 128 aa13.2□□□□□ -0.3
KCNC4-204ENST00000438661 IGKV3D-7A0A0C4DH55 119 aa13.2□□□□□ -0.3
KCNC4-204ENST00000438661 KIR2DL5BQ8NHK3 375 aa13.2□□□□□ -0.3
KCNC4-204ENST00000438661 TINCRA0A1B0GVN0 87 aa13.19□□□□□ -0.3
KCNC4-204ENST00000438661 FAM218AQ96MZ4 157 aa13.19□□□□□ -0.3
KCNC4-204ENST00000438661 MOB4Q9Y3A3 225 aa13.19□□□□□ -0.3
KCNC4-204ENST00000438661 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.18□□□□□ -0.3
KCNC4-204ENST00000438661 PYGO1Q9Y3Y4 419 aa13.18□□□□□ -0.3
KCNC4-204ENST00000438661 HIVEP3Q5T1R4 2406 aa13.18□□□□□ -0.3
KCNC4-204ENST00000438661 SYNJ2BPP57105 145 aa13.17□□□□□ -0.3
KCNC4-204ENST00000438661 DGAT2L7PQ6IED9 249 aa13.17□□□□□ -0.3
KCNC4-204ENST00000438661 LRRC75A-AS1Q8N1F1 130 aa13.17□□□□□ -0.3
KCNC4-204ENST00000438661 LINC00467Q9BRT7 94 aa13.17□□□□□ -0.3
KCNC4-204ENST00000438661 BLCAPP62952 87 aa13.17□□□□□ -0.3
KCNC4-204ENST00000438661 COX6A2Q02221 97 aa13.17□□□□□ -0.3
KCNC4-204ENST00000438661 A0A1B0GX51 115 aa13.16□□□□□ -0.3
KCNC4-204ENST00000438661 SOSTDC1Q6X4U4 206 aa13.16□□□□□ -0.3
KCNC4-204ENST00000438661 PEMTQ9UBM1 199 aa13.16□□□□□ -0.3
KCNC4-204ENST00000438661 A0A087WVE0 104 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms