RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 BCL2P10415 239 aa9.2□□□□□ -0.94
TNFRSF1A-203ENST00000437813 NTF3P20783 257 aa9.2□□□□□ -0.94
TNFRSF1A-203ENST00000437813 TMEM243Q9BU79 118 aa9.2□□□□□ -0.94
TNFRSF1A-203ENST00000437813 TRAV8-4A0A0B4J246 113 aa9.19□□□□□ -0.94
TNFRSF1A-203ENST00000437813 P01737 135 aa9.19□□□□□ -0.94
TNFRSF1A-203ENST00000437813 RPL37AP61513 92 aaKnown RBP9.19□□□□□ -0.94
TNFRSF1A-203ENST00000437813 NUDT10Q8NFP7 164 aa9.19□□□□□ -0.94
TNFRSF1A-203ENST00000437813 NUDT11Q96G61 164 aa9.19□□□□□ -0.94
TNFRSF1A-203ENST00000437813 DPH3P1Q9H4G8 78 aa9.19□□□□□ -0.94
TNFRSF1A-203ENST00000437813 K7EN84 100 aa9.18□□□□□ -0.94
TNFRSF1A-203ENST00000437813 IFNA1P01562 189 aa9.18□□□□□ -0.94
TNFRSF1A-203ENST00000437813 TRGC1P0CF51 173 aa9.18□□□□□ -0.94
TNFRSF1A-203ENST00000437813 MT1HL1P0DM35 61 aa9.18□□□□□ -0.94
TNFRSF1A-203ENST00000437813 SERTAD4-AS1Q5TG53 156 aa9.18□□□□□ -0.94
TNFRSF1A-203ENST00000437813 TCTE3Q8IZS6 198 aa9.18□□□□□ -0.94
TNFRSF1A-203ENST00000437813 MED9Q9NWA0 146 aa9.18□□□□□ -0.94
TNFRSF1A-203ENST00000437813 XKRY2A2RUG3 117 aa9.17□□□□□ -0.94
TNFRSF1A-203ENST00000437813 EIF5AL1Q6IS14 154 aaKnown RBP9.17□□□□□ -0.94
TNFRSF1A-203ENST00000437813 GATD1Q8NB37 220 aa9.17□□□□□ -0.94
TNFRSF1A-203ENST00000437813 C15orf56Q8N910 161 aa9.16□□□□□ -0.94
TNFRSF1A-203ENST00000437813 GTSF1Q8WW33 167 aa9.16□□□□□ -0.94
TNFRSF1A-203ENST00000437813 BIN3Q9NQY0 253 aa9.16□□□□□ -0.94
TNFRSF1A-203ENST00000437813 TEX46H3BTG2 121 aa9.15□□□□□ -0.94
TNFRSF1A-203ENST00000437813 OCC1Q8TAD7 63 aa9.15□□□□□ -0.94
TNFRSF1A-203ENST00000437813 TRAV26-2A0A0B4J265 109 aa9.14□□□□□ -0.95
TNFRSF1A-203ENST00000437813 hDV102S1A0JD36 115 aa9.14□□□□□ -0.95
TNFRSF1A-203ENST00000437813 AMTP48728 403 aa9.14□□□□□ -0.95
TNFRSF1A-203ENST00000437813 COTL1Q14019 142 aa9.14□□□□□ -0.95
TNFRSF1A-203ENST00000437813 SLC51BQ86UW2 128 aa9.14□□□□□ -0.95
TNFRSF1A-203ENST00000437813 SPACA4Q8TDM5 124 aa9.14□□□□□ -0.95
TNFRSF1A-203ENST00000437813 RNASE7Q9H1E1 156 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-203ENST00000437813 RPP21Q9H633 154 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-203ENST00000437813 CHTF8P0CG12 524 aa9.13□□□□□ -0.95
TNFRSF1A-203ENST00000437813 TAGLN2P37802 199 aaKnown RBP9.13□□□□□ -0.95
TNFRSF1A-203ENST00000437813 FOXA3P55318 350 aaPredicted RBP9.13□□□□□ -0.95
TNFRSF1A-203ENST00000437813 Q6ZNX1 250 aa9.13□□□□□ -0.95
TNFRSF1A-203ENST00000437813 RNF185Q96GF1 192 aa9.13□□□□□ -0.95
TNFRSF1A-203ENST00000437813 IGHV3-64A0A075B6Q5 118 aa9.12□□□□□ -0.95
TNFRSF1A-203ENST00000437813 A0A087WYN8 130 aa9.12□□□□□ -0.95
TNFRSF1A-203ENST00000437813 TWIST1Q15672 202 aa9.12□□□□□ -0.95
TNFRSF1A-203ENST00000437813 LYPD6BQ8NI32 183 aa9.12□□□□□ -0.95
TNFRSF1A-203ENST00000437813 RPL39LQ96EH5 51 aaKnown RBP9.12□□□□□ -0.95
TNFRSF1A-203ENST00000437813 PLAC8Q9NZF1 115 aa9.12□□□□□ -0.95
TNFRSF1A-203ENST00000437813 FAM231BA6NCW3 169 aa9.11□□□□□ -0.95
TNFRSF1A-203ENST00000437813 UBR4Q5T4S7 5183 aa9.1□□□□□ -0.95
TNFRSF1A-203ENST00000437813 GAGE12HA6NDE8 117 aa9.1□□□□□ -0.95
TNFRSF1A-203ENST00000437813 TMEM250H0YL14 139 aa9.1□□□□□ -0.95
TNFRSF1A-203ENST00000437813 NCR2O95944 276 aa9.1□□□□□ -0.95
TNFRSF1A-203ENST00000437813 Q6ZRU5 148 aa9.1□□□□□ -0.95
TNFRSF1A-203ENST00000437813 FAM231DQ6ZW35 169 aa9.1□□□□□ -0.95
TNFRSF1A-203ENST00000437813 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-203ENST00000437813 TRBV6-5A0A0K0K1A5 114 aa9.09□□□□□ -0.95
TNFRSF1A-203ENST00000437813 H7C423 109 aa9.09□□□□□ -0.95
TNFRSF1A-203ENST00000437813 UBE2L6O14933 153 aa9.09□□□□□ -0.95
TNFRSF1A-203ENST00000437813 GAS8-AS1O95177 125 aa9.09□□□□□ -0.95
TNFRSF1A-203ENST00000437813 GVQW2A0A096LPI5 108 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-203ENST00000437813 SDHAF1A6NFY7 115 aa9.08□□□□□ -0.96
TNFRSF1A-203ENST00000437813 CHCHD10Q8WYQ3 142 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-203ENST00000437813 AP5S1Q9NUS5 200 aa9.08□□□□□ -0.96
TNFRSF1A-203ENST00000437813 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.07□□□□□ -0.96
TNFRSF1A-203ENST00000437813 IGKV2-29A2NJV5 120 aaPredicted RBP9.07□□□□□ -0.96
TNFRSF1A-203ENST00000437813 FGF6P10767 208 aa9.07□□□□□ -0.96
TNFRSF1A-203ENST00000437813 ESDP10768 282 aa9.07□□□□□ -0.96
TNFRSF1A-203ENST00000437813 FOXI1Q12951 378 aa9.07□□□□□ -0.96
TNFRSF1A-203ENST00000437813 CT83Q5H943 113 aa9.07□□□□□ -0.96
TNFRSF1A-203ENST00000437813 LCE2AQ5TA79 106 aaPredicted RBP9.07□□□□□ -0.96
TNFRSF1A-203ENST00000437813 TEX261Q6UWH6 196 aa9.07□□□□□ -0.96
TNFRSF1A-203ENST00000437813 PRSS3P2Q8NHM4 247 aa9.07□□□□□ -0.96
TNFRSF1A-203ENST00000437813 RPS10P46783 165 aaKnown RBP9.06□□□□□ -0.96
TNFRSF1A-203ENST00000437813 COX6A2Q02221 97 aa9.06□□□□□ -0.96
TNFRSF1A-203ENST00000437813 PLA2G2DQ9UNK4 145 aa9.06□□□□□ -0.96
TNFRSF1A-203ENST00000437813 A8MWL6 223 aa9.05□□□□□ -0.96
TNFRSF1A-203ENST00000437813 TSHBP01222 138 aa9.05□□□□□ -0.96
TNFRSF1A-203ENST00000437813 ZNF25P17030 456 aaPredicted RBP9.05□□□□□ -0.96
TNFRSF1A-203ENST00000437813 HIGD2BQ4VC39 106 aa9.05□□□□□ -0.96
TNFRSF1A-203ENST00000437813 CFAP161Q6P656 301 aa9.05□□□□□ -0.96
TNFRSF1A-203ENST00000437813 IGKV3OR2-268A0A0C4DH90 116 aa9.04□□□□□ -0.96
TNFRSF1A-203ENST00000437813 PHOX2AO14813 284 aa9.04□□□□□ -0.96
TNFRSF1A-203ENST00000437813 GATCO43716 136 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-203ENST00000437813 NDUFS6O75380 124 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-203ENST00000437813 APCSP02743 223 aa9.04□□□□□ -0.96
TNFRSF1A-203ENST00000437813 POLR2KP53803 58 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-203ENST00000437813 ALKAL2Q6UX46 152 aa9.04□□□□□ -0.96
TNFRSF1A-203ENST00000437813 OR5A1Q8NGJ0 315 aa9.04□□□□□ -0.96
TNFRSF1A-203ENST00000437813 LINC00959A0A1B0GUT2 108 aa9.03□□□□□ -0.96
TNFRSF1A-203ENST00000437813 I3L3M4 83 aa9.03□□□□□ -0.96
TNFRSF1A-203ENST00000437813 BLOC1S1P78537 153 aa9.03□□□□□ -0.96
TNFRSF1A-203ENST00000437813 AMMECR1LQ6DCA0 310 aa9.03□□□□□ -0.96
TNFRSF1A-203ENST00000437813 MRPL52Q86TS9 123 aaKnown RBP9.03□□□□□ -0.96
TNFRSF1A-203ENST00000437813 LINC01551Q86U37 167 aa9.03□□□□□ -0.96
TNFRSF1A-203ENST00000437813 FAM210AQ96ND0 272 aa9.03□□□□□ -0.96
TNFRSF1A-203ENST00000437813 A0A096LNI7 61 aa9.02□□□□□ -0.97
TNFRSF1A-203ENST00000437813 TRBV27A0A0K0K1C4 114 aa9.02□□□□□ -0.97
TNFRSF1A-203ENST00000437813 RNASEKQ6P5S7 137 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-203ENST00000437813 SMIM15Q7Z3B0 74 aa9.02□□□□□ -0.97
TNFRSF1A-203ENST00000437813 TMEM191AQ9H0A3 160 aa9.02□□□□□ -0.97
TNFRSF1A-203ENST00000437813 TNXBP22105 4242 aa9.01□□□□□ -0.97
TNFRSF1A-203ENST00000437813 PRR3P79522 188 aaKnown RBP9.01□□□□□ -0.97
TNFRSF1A-203ENST00000437813 TSKUQ8WUA8 353 aa9.01□□□□□ -0.97
TNFRSF1A-203ENST00000437813 CDC42SE2Q9NRR3 84 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms