RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 IGHV1-24A0A0C4DH33 117 aa12.29□□□□□ -0.44
HLA-F-220ENST00000434407 A0A1B0GXF2 115 aa12.29□□□□□ -0.44
HLA-F-220ENST00000434407 GAS8-AS1O95177 125 aa12.29□□□□□ -0.44
HLA-F-220ENST00000434407 MRAP2Q96G30 205 aa12.29□□□□□ -0.44
HLA-F-220ENST00000434407 TRAV8-3A0A0A6YYJ7 113 aa12.28□□□□□ -0.44
HLA-F-220ENST00000434407 CHCHD5Q9BSY4 110 aa12.28□□□□□ -0.44
HLA-F-220ENST00000434407 DNAH5Q8TE73 4624 aa12.28□□□□□ -0.44
HLA-F-220ENST00000434407 TMEM262E9PQX1 116 aa12.27□□□□□ -0.45
HLA-F-220ENST00000434407 ELOBQ15370 118 aa12.27□□□□□ -0.45
HLA-F-220ENST00000434407 MPV17L2Q567V2 206 aa12.27□□□□□ -0.45
HLA-F-220ENST00000434407 FAM104BQ5XKR9 115 aa12.27□□□□□ -0.45
HLA-F-220ENST00000434407 Q9HAA7 133 aa12.27□□□□□ -0.45
HLA-F-220ENST00000434407 SDHAF1A6NFY7 115 aa12.26□□□□□ -0.45
HLA-F-220ENST00000434407 S100PP25815 95 aa12.26□□□□□ -0.45
HLA-F-220ENST00000434407 HBBP68871 147 aa12.26□□□□□ -0.45
HLA-F-220ENST00000434407 COTL1Q14019 142 aa12.26□□□□□ -0.45
HLA-F-220ENST00000434407 IMMP2LQ96T52 175 aa12.26□□□□□ -0.45
HLA-F-220ENST00000434407 KLK12Q9UKR0 248 aa12.26□□□□□ -0.45
HLA-F-220ENST00000434407 LRP1BQ9NZR2 4599 aa12.26□□□□□ -0.45
HLA-F-220ENST00000434407 A0A087WTM6 91 aa12.25□□□□□ -0.45
HLA-F-220ENST00000434407 RPS10P46783 165 aaKnown RBP12.25□□□□□ -0.45
HLA-F-220ENST00000434407 CAMPP49913 170 aa12.25□□□□□ -0.45
HLA-F-220ENST00000434407 ATP5L2Q7Z4Y8 100 aa12.25□□□□□ -0.45
HLA-F-220ENST00000434407 TMEM243Q9BU79 118 aa12.25□□□□□ -0.45
HLA-F-220ENST00000434407 LRCOL1A6NCL2 159 aa12.24□□□□□ -0.45
HLA-F-220ENST00000434407 NCR2O95944 276 aa12.24□□□□□ -0.45
HLA-F-220ENST00000434407 S100A8P05109 93 aa12.24□□□□□ -0.45
HLA-F-220ENST00000434407 POLR2KP53803 58 aaKnown RBP12.24□□□□□ -0.45
HLA-F-220ENST00000434407 MRPL51Q4U2R6 128 aaKnown RBP12.24□□□□□ -0.45
HLA-F-220ENST00000434407 MRPL54Q6P161 138 aaKnown RBP12.24□□□□□ -0.45
HLA-F-220ENST00000434407 TM2D2Q9BX73 214 aa12.24□□□□□ -0.45
HLA-F-220ENST00000434407 A0A1B0GUV1 79 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 COLCA2A8K830 154 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 KRTAP10-2P60368 255 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 RBX1P62877 108 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 GAGE6Q13070 117 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 SPATA12Q7Z6I5 190 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 NRACQ8N912 160 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 Q8N976 141 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 YPEL4Q96NS1 127 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 TMEM70Q9BUB7 260 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 ST20Q9HBF5 79 aa12.23□□□□□ -0.45
HLA-F-220ENST00000434407 TRBV27A0A0K0K1C4 114 aa12.22□□□□□ -0.45
HLA-F-220ENST00000434407 SMKR1H3BMG3 65 aa12.22□□□□□ -0.45
HLA-F-220ENST00000434407 PPP1R17O96001 155 aa12.22□□□□□ -0.45
HLA-F-220ENST00000434407 AMTP48728 403 aa12.22□□□□□ -0.45
HLA-F-220ENST00000434407 Q0VG73 95 aa12.22□□□□□ -0.45
HLA-F-220ENST00000434407 ENHOQ6UWT2 76 aa12.22□□□□□ -0.45
HLA-F-220ENST00000434407 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
HLA-F-220ENST00000434407 PRR34Q9NV39 138 aa12.22□□□□□ -0.45
HLA-F-220ENST00000434407 COX11Q9Y6N1 276 aa12.22□□□□□ -0.45
HLA-F-220ENST00000434407 I3L3M4 83 aa12.21□□□□□ -0.45
HLA-F-220ENST00000434407 EREGO14944 169 aa12.21□□□□□ -0.45
HLA-F-220ENST00000434407 PSCAO43653 123 aa12.21□□□□□ -0.45
HLA-F-220ENST00000434407 ANGP03950 147 aaKnown RBP12.21□□□□□ -0.45
HLA-F-220ENST00000434407 UBE2WQ96B02 151 aa12.21□□□□□ -0.45
HLA-F-220ENST00000434407 KIAA1109Q2LD37 5005 aa12.2□□□□□ -0.46
HLA-F-220ENST00000434407 TRBV24-1A0A075B6N3 115 aa12.2□□□□□ -0.46
HLA-F-220ENST00000434407 MAPKAPK5-AS1Q8N8E1 139 aa12.2□□□□□ -0.46
HLA-F-220ENST00000434407 C20orf203Q8NBC4 194 aa12.2□□□□□ -0.46
HLA-F-220ENST00000434407 RMI2Q96E14 147 aa12.2□□□□□ -0.46
HLA-F-220ENST00000434407 BTF3L4Q96K17 158 aa12.2□□□□□ -0.46
HLA-F-220ENST00000434407 TGIF2-C20orf24A0A0A6YYL0 155 aa12.19□□□□□ -0.46
HLA-F-220ENST00000434407 TSHBP01222 138 aa12.19□□□□□ -0.46
HLA-F-220ENST00000434407 PMCHP20382 165 aa12.19□□□□□ -0.46
HLA-F-220ENST00000434407 PGPEP1Q9NXJ5 209 aa12.19□□□□□ -0.46
HLA-F-220ENST00000434407 IGLV4-60A0A075B6I1 120 aa12.18□□□□□ -0.46
HLA-F-220ENST00000434407 TRAV9-1A0A075B6T8 112 aa12.18□□□□□ -0.46
HLA-F-220ENST00000434407 C16orf90A8MZG2 172 aa12.18□□□□□ -0.46
HLA-F-220ENST00000434407 H7C423 109 aa12.18□□□□□ -0.46
HLA-F-220ENST00000434407 APCSP02743 223 aa12.18□□□□□ -0.46
HLA-F-220ENST00000434407 ESDP10768 282 aa12.18□□□□□ -0.46
HLA-F-220ENST00000434407 SUMO2P61956 95 aaKnown RBP12.18□□□□□ -0.46
HLA-F-220ENST00000434407 VCYO14598 125 aa12.17□□□□□ -0.46
HLA-F-220ENST00000434407 UBE2L6O14933 153 aa12.17□□□□□ -0.46
HLA-F-220ENST00000434407 CKS2P33552 79 aa12.17□□□□□ -0.46
HLA-F-220ENST00000434407 RPL32P62910 135 aaKnown RBP12.17□□□□□ -0.46
HLA-F-220ENST00000434407 MIAQ16674 131 aa12.17□□□□□ -0.46
HLA-F-220ENST00000434407 CDPF1Q6NVV7 123 aa12.17□□□□□ -0.46
HLA-F-220ENST00000434407 C20orf78Q9BR46 151 aa12.17□□□□□ -0.46
HLA-F-220ENST00000434407 IGKV2D-24A0A075B6R9 120 aa12.16□□□□□ -0.46
HLA-F-220ENST00000434407 CRPP02741 224 aa12.16□□□□□ -0.46
HLA-F-220ENST00000434407 PPBPP02775 128 aa12.16□□□□□ -0.46
HLA-F-220ENST00000434407 RAB5AP20339 215 aa12.16□□□□□ -0.46
HLA-F-220ENST00000434407 LINC00269Q8N2A0 174 aa12.16□□□□□ -0.46
HLA-F-220ENST00000434407 D6R8Y8 96 aa12.15□□□□□ -0.46
HLA-F-220ENST00000434407 PHOX2AO14813 284 aa12.15□□□□□ -0.46
HLA-F-220ENST00000434407 WFDC2Q14508 124 aa12.15□□□□□ -0.46
HLA-F-220ENST00000434407 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.14□□□□□ -0.47
HLA-F-220ENST00000434407 IGKV2-29A2NJV5 120 aaPredicted RBP12.14□□□□□ -0.47
HLA-F-220ENST00000434407 TNFRSF6BO95407 300 aa12.14□□□□□ -0.47
HLA-F-220ENST00000434407 KRTAP26-1Q6PEX3 210 aa12.14□□□□□ -0.47
HLA-F-220ENST00000434407 Q8N814 137 aa12.14□□□□□ -0.47
HLA-F-220ENST00000434407 C1orf43Q9BWL3 253 aa12.14□□□□□ -0.47
HLA-F-220ENST00000434407 REG3AQ06141 175 aa12.13□□□□□ -0.47
HLA-F-220ENST00000434407 HERC2O95714 4834 aa12.13□□□□□ -0.47
HLA-F-220ENST00000434407 RYR1P21817 5038 aa12.12□□□□□ -0.47
HLA-F-220ENST00000434407 NPYP01303 97 aa12.12□□□□□ -0.47
HLA-F-220ENST00000434407 FGF6P10767 208 aa12.12□□□□□ -0.47
HLA-F-220ENST00000434407 CLPSL2Q6UWE3 100 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms