RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 C18orf32Q8TCD1 76 aa8.46□□□□□ -1.06
LINC00339-204ENST00000434233 UPK3BQ9BT76 320 aa8.46□□□□□ -1.06
LINC00339-204ENST00000434233 IGHV1-24A0A0C4DH33 117 aa8.45□□□□□ -1.06
LINC00339-204ENST00000434233 TSHBP01222 138 aa8.45□□□□□ -1.06
LINC00339-204ENST00000434233 UBE2DNLQ8IWF7 75 aa8.45□□□□□ -1.06
LINC00339-204ENST00000434233 STARD9Q9P2P6 4700 aa8.45□□□□□ -1.06
LINC00339-204ENST00000434233 LINC01546A6NGU7 62 aa8.44□□□□□ -1.06
LINC00339-204ENST00000434233 ESDP10768 282 aa8.44□□□□□ -1.06
LINC00339-204ENST00000434233 FCER1GP30273 86 aa8.44□□□□□ -1.06
LINC00339-204ENST00000434233 RAB5BP61020 215 aa8.44□□□□□ -1.06
LINC00339-204ENST00000434233 Q0VG73 95 aa8.44□□□□□ -1.06
LINC00339-204ENST00000434233 DEFB104AQ8WTQ1 72 aa8.44□□□□□ -1.06
LINC00339-204ENST00000434233 PLECQ15149 4684 aaKnown RBP8.43□□□□□ -1.06
LINC00339-204ENST00000434233 H7C423 109 aa8.43□□□□□ -1.06
LINC00339-204ENST00000434233 LINC00614P0C842 121 aa8.43□□□□□ -1.06
LINC00339-204ENST00000434233 AMTP48728 403 aa8.43□□□□□ -1.06
LINC00339-204ENST00000434233 ORMDL2Q53FV1 153 aa8.43□□□□□ -1.06
LINC00339-204ENST00000434233 NIT1Q86X76 327 aa8.43□□□□□ -1.06
LINC00339-204ENST00000434233 TMEM243Q9BU79 118 aa8.43□□□□□ -1.06
LINC00339-204ENST00000434233 CHCHD7Q9BUK0 85 aa8.43□□□□□ -1.06
LINC00339-204ENST00000434233 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
LINC00339-204ENST00000434233 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
LINC00339-204ENST00000434233 C1orf196B1AJZ1 125 aa8.42□□□□□ -1.06
LINC00339-204ENST00000434233 G0S2P27469 103 aa8.42□□□□□ -1.06
LINC00339-204ENST00000434233 PKIAP61925 76 aa8.42□□□□□ -1.06
LINC00339-204ENST00000434233 LAGE3Q14657 143 aa8.42□□□□□ -1.06
LINC00339-204ENST00000434233 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
LINC00339-204ENST00000434233 FA2HQ7L5A8 372 aa8.42□□□□□ -1.06
LINC00339-204ENST00000434233 TMEM18Q96B42 140 aa8.42□□□□□ -1.06
LINC00339-204ENST00000434233 Q9H8V8 135 aa8.42□□□□□ -1.06
LINC00339-204ENST00000434233 SIVA1O15304 175 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST1H2BKO60814 126 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST1H2BJP06899 126 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST1H2BOP23527 126 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST1H2BBP33778 126 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST1H2BDP58876 126 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST1H2BCP62807 126 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST2H2BEQ16778 126 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST1H2BHQ93079 126 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 URB1-AS1Q96HZ7 61 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST1H2BNQ99877 126 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 HIST1H2BMQ99879 126 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 CHCHD5Q9BSY4 110 aa8.41□□□□□ -1.06
LINC00339-204ENST00000434233 TMEM262E9PQX1 116 aa8.4□□□□□ -1.06
LINC00339-204ENST00000434233 UBE2L6O14933 153 aa8.4□□□□□ -1.06
LINC00339-204ENST00000434233 BAGE3Q86Y29 109 aa8.4□□□□□ -1.06
LINC00339-204ENST00000434233 WFDC10BQ8IUB3 73 aa8.4□□□□□ -1.06
LINC00339-204ENST00000434233 C20orf203Q8NBC4 194 aa8.4□□□□□ -1.06
LINC00339-204ENST00000434233 LINC00476Q8WZB0 136 aa8.4□□□□□ -1.06
LINC00339-204ENST00000434233 CHCHD1Q96BP2 118 aaKnown RBP8.4□□□□□ -1.06
LINC00339-204ENST00000434233 AP5S1Q9NUS5 200 aa8.4□□□□□ -1.06
LINC00339-204ENST00000434233 A0A1B0GUV1 79 aa8.39□□□□□ -1.07
LINC00339-204ENST00000434233 LY6G6CO95867 125 aa8.39□□□□□ -1.07
LINC00339-204ENST00000434233 DNAH10OSP0CZ25 163 aa8.39□□□□□ -1.07
LINC00339-204ENST00000434233 SMAGPQ0VAQ4 97 aa8.39□□□□□ -1.07
LINC00339-204ENST00000434233 GAGE6Q13070 117 aa8.39□□□□□ -1.07
LINC00339-204ENST00000434233 LINC01556Q5JQF7 62 aa8.39□□□□□ -1.07
LINC00339-204ENST00000434233 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.38□□□□□ -1.07
LINC00339-204ENST00000434233 A0A087WX48 190 aa8.38□□□□□ -1.07
LINC00339-204ENST00000434233 IGKV2-29A2NJV5 120 aaPredicted RBP8.38□□□□□ -1.07
LINC00339-204ENST00000434233 LINC01549A6NIU2 74 aa8.38□□□□□ -1.07
LINC00339-204ENST00000434233 K7EP13 123 aa8.38□□□□□ -1.07
LINC00339-204ENST00000434233 TRAV9-2A0A087WT02 112 aa8.37□□□□□ -1.07
LINC00339-204ENST00000434233 FGF6P10767 208 aa8.37□□□□□ -1.07
LINC00339-204ENST00000434233 ZNF25P17030 456 aaPredicted RBP8.37□□□□□ -1.07
LINC00339-204ENST00000434233 AMMECR1LQ6DCA0 310 aa8.37□□□□□ -1.07
LINC00339-204ENST00000434233 RNASEKQ6P5S7 137 aaKnown RBP8.37□□□□□ -1.07
LINC00339-204ENST00000434233 C2orf66Q6UXQ4 117 aa8.37□□□□□ -1.07
LINC00339-204ENST00000434233 MRPL52Q86TS9 123 aaKnown RBP8.37□□□□□ -1.07
LINC00339-204ENST00000434233 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
LINC00339-204ENST00000434233 CSDC2Q9Y534 153 aaKnown RBP8.37□□□□□ -1.07
LINC00339-204ENST00000434233 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
LINC00339-204ENST00000434233 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
LINC00339-204ENST00000434233 IGHV3-30-3P0DP02 117 aa8.36□□□□□ -1.07
LINC00339-204ENST00000434233 IGHV3-30-5P0DP03 117 aa8.36□□□□□ -1.07
LINC00339-204ENST00000434233 BTF3P20290 206 aaKnown RBP8.36□□□□□ -1.07
LINC00339-204ENST00000434233 RBX1P62877 108 aa8.36□□□□□ -1.07
LINC00339-204ENST00000434233 RPL39P62891 51 aaKnown RBP8.36□□□□□ -1.07
LINC00339-204ENST00000434233 MPV17L2Q567V2 206 aa8.36□□□□□ -1.07
LINC00339-204ENST00000434233 TOMM6Q96B49 74 aa8.36□□□□□ -1.07
LINC00339-204ENST00000434233 CYSLTR1Q9Y271 337 aa8.36□□□□□ -1.07
LINC00339-204ENST00000434233 UBE2D4Q9Y2X8 147 aa8.36□□□□□ -1.07
LINC00339-204ENST00000434233 PYGO1Q9Y3Y4 419 aa8.36□□□□□ -1.07
LINC00339-204ENST00000434233 SERF1AO75920 110 aa8.35□□□□□ -1.07
LINC00339-204ENST00000434233 COA6Q5JTJ3 125 aaKnown RBP8.35□□□□□ -1.07
LINC00339-204ENST00000434233 DGAT2L7PQ6IED9 249 aa8.35□□□□□ -1.07
LINC00339-204ENST00000434233 C10orf126Q8N4M7 172 aa8.35□□□□□ -1.07
LINC00339-204ENST00000434233 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
LINC00339-204ENST00000434233 SPANXA1Q9NS26 97 aa8.35□□□□□ -1.07
LINC00339-204ENST00000434233 TENM2Q9NT68 2774 aa8.35□□□□□ -1.07
LINC00339-204ENST00000434233 IGLV4-60A0A075B6I1 120 aa8.34□□□□□ -1.07
LINC00339-204ENST00000434233 LCE6AA0A183 80 aa8.34□□□□□ -1.07
LINC00339-204ENST00000434233 NUPR1O60356 82 aa8.34□□□□□ -1.07
LINC00339-204ENST00000434233 HSBP1O75506 76 aa8.34□□□□□ -1.07
LINC00339-204ENST00000434233 NPSP0C0P6 89 aa8.34□□□□□ -1.07
LINC00339-204ENST00000434233 NDUFA6P56556 154 aa8.34□□□□□ -1.07
LINC00339-204ENST00000434233 LINC00310P59036 64 aa8.34□□□□□ -1.07
LINC00339-204ENST00000434233 Q8N3U1 123 aa8.34□□□□□ -1.07
LINC00339-204ENST00000434233 Q8N976 141 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms