RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 VAMP3Q15836 100 aa8.65□□□□□ -1.02
CTCFL-209ENST00000433949 SHISA2Q6UWI4 295 aa8.65□□□□□ -1.02
CTCFL-209ENST00000433949 Q6ZVH6 145 aa8.65□□□□□ -1.02
CTCFL-209ENST00000433949 IGLV4-69A0A075B6H9 119 aa8.65□□□□□ -1.03
CTCFL-209ENST00000433949 RS1O15537 224 aa8.65□□□□□ -1.03
CTCFL-209ENST00000433949 P0DMU3 169 aa8.65□□□□□ -1.03
CTCFL-209ENST00000433949 FAM231AP0DMU4 169 aa8.65□□□□□ -1.03
CTCFL-209ENST00000433949 FAM231CP0DMU5 169 aa8.65□□□□□ -1.03
CTCFL-209ENST00000433949 CRYBA4P53673 196 aa8.65□□□□□ -1.03
CTCFL-209ENST00000433949 TTTY13Q9BZ97 58 aa8.65□□□□□ -1.03
CTCFL-209ENST00000433949 PYGO1Q9Y3Y4 419 aa8.65□□□□□ -1.03
CTCFL-209ENST00000433949 MYMXA0A1B0GTQ4 84 aa8.64□□□□□ -1.03
CTCFL-209ENST00000433949 C1orf158Q8N1D5 194 aa8.64□□□□□ -1.03
CTCFL-209ENST00000433949 TMEM263Q8WUH6 116 aaKnown RBP8.64□□□□□ -1.03
CTCFL-209ENST00000433949 TM2D2Q9BX73 214 aa8.64□□□□□ -1.03
CTCFL-209ENST00000433949 C1QTNF4Q9BXJ3 329 aa8.64□□□□□ -1.03
CTCFL-209ENST00000433949 IGHV3-73A0A0B4J1V6 119 aa8.64□□□□□ -1.03
CTCFL-209ENST00000433949 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
CTCFL-209ENST00000433949 IL17DQ8TAD2 202 aa8.64□□□□□ -1.03
CTCFL-209ENST00000433949 PRM2P04554 102 aa8.63□□□□□ -1.03
CTCFL-209ENST00000433949 GCSHP23434 173 aa8.63□□□□□ -1.03
CTCFL-209ENST00000433949 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
CTCFL-209ENST00000433949 MAPKAPK5-AS1Q8N8E1 139 aa8.63□□□□□ -1.03
CTCFL-209ENST00000433949 RNASE8Q8TDE3 154 aaKnown RBP8.63□□□□□ -1.03
CTCFL-209ENST00000433949 PRADC1Q9BSG0 188 aa8.63□□□□□ -1.03
CTCFL-209ENST00000433949 MRPL16Q9NX20 251 aaKnown RBP8.63□□□□□ -1.03
CTCFL-209ENST00000433949 CEND1Q8N111 149 aa8.62□□□□□ -1.03
CTCFL-209ENST00000433949 C9orf118A6NHY6 69 aa8.62□□□□□ -1.03
CTCFL-209ENST00000433949 CCL25O15444 150 aa8.62□□□□□ -1.03
CTCFL-209ENST00000433949 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
CTCFL-209ENST00000433949 IGHV3OR16-12A0A075B7B8 117 aa8.61□□□□□ -1.03
CTCFL-209ENST00000433949 SMIM13P0DJ93 91 aa8.61□□□□□ -1.03
CTCFL-209ENST00000433949 AZU1P20160 251 aa8.61□□□□□ -1.03
CTCFL-209ENST00000433949 VCX2Q9H322 139 aa8.61□□□□□ -1.03
CTCFL-209ENST00000433949 OR4C5Q8NGB2 326 aa8.61□□□□□ -1.03
CTCFL-209ENST00000433949 IGLV4-3A0A075B6K6 122 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 ZNF815PA8K554 130 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 TMEM170BQ5T4T1 132 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 C16orf74Q96GX8 76 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 SPANXA1Q9NS26 97 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 C19orf73Q9NVV2 129 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 TRGV1A0A0A0MS02 117 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 TRBV10-1A0A0K0K1A3 114 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 CIDEAO60543 219 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 FXYD2P54710 66 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 DAZ2Q13117 558 aaKnown RBP8.6□□□□□ -1.03
CTCFL-209ENST00000433949 ZNRF2Q8NHG8 242 aa8.6□□□□□ -1.03
CTCFL-209ENST00000433949 COTL1Q14019 142 aa8.59□□□□□ -1.03
CTCFL-209ENST00000433949 OXLD1Q5BKU9 147 aa8.59□□□□□ -1.03
CTCFL-209ENST00000433949 AMMECR1LQ6DCA0 310 aa8.59□□□□□ -1.03
CTCFL-209ENST00000433949 Q6ZSN1 163 aa8.59□□□□□ -1.03
CTCFL-209ENST00000433949 TRAV4A0A0B4J268 109 aa8.58□□□□□ -1.04
CTCFL-209ENST00000433949 EMP1P54849 157 aa8.58□□□□□ -1.04
CTCFL-209ENST00000433949 SCGB1D4Q6XE38 83 aa8.58□□□□□ -1.04
CTCFL-209ENST00000433949 GTF2H5Q6ZYL4 71 aa8.58□□□□□ -1.04
CTCFL-209ENST00000433949 AMELXQ99217 191 aa8.58□□□□□ -1.04
CTCFL-209ENST00000433949 ANK2Q01484 3957 aa8.58□□□□□ -1.04
CTCFL-209ENST00000433949 TRBV7-3A0A075B6L6 115 aa8.57□□□□□ -1.04
CTCFL-209ENST00000433949 H3BUT2 72 aa8.57□□□□□ -1.04
CTCFL-209ENST00000433949 GIG44P09565 113 aaPredicted RBP8.57□□□□□ -1.04
CTCFL-209ENST00000433949 INSL3P51460 131 aa8.57□□□□□ -1.04
CTCFL-209ENST00000433949 C9orf66Q5T8R8 295 aa8.57□□□□□ -1.04
CTCFL-209ENST00000433949 WFDC9Q8NEX5 89 aa8.57□□□□□ -1.04
CTCFL-209ENST00000433949 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
CTCFL-209ENST00000433949 WFDC10AQ9H1F0 79 aa8.57□□□□□ -1.04
CTCFL-209ENST00000433949 NOTCH1P46531 2555 aa8.57□□□□□ -1.04
CTCFL-209ENST00000433949 TMEM238LA0A1B0GVL6 79 aa8.57□□□□□ -1.04
CTCFL-209ENST00000433949 A6NJY4 79 aa8.57□□□□□ -1.04
CTCFL-209ENST00000433949 RPL36AP83881 106 aaKnown RBP8.57□□□□□ -1.04
CTCFL-209ENST00000433949 RPL36ALQ969Q0 106 aaKnown RBP8.57□□□□□ -1.04
CTCFL-209ENST00000433949 OPRPNQ99935 248 aaPredicted RBP8.57□□□□□ -1.04
CTCFL-209ENST00000433949 MGAM2Q2M2H8 2515 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 TMEM223A0PJW6 202 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 GAGE10A6NGK3 116 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 MRPS36P82909 103 aaKnown RBP8.56□□□□□ -1.04
CTCFL-209ENST00000433949 RAB37Q96AX2 223 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 NHP2Q9NX24 153 aaKnown RBP8.56□□□□□ -1.04
CTCFL-209ENST00000433949 UBE2D4Q9Y2X8 147 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 J3QQQ9 107 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 K7EQD1 137 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 LGALS3P17931 250 aaKnown RBP8.56□□□□□ -1.04
CTCFL-209ENST00000433949 RRN3P1Q2M238 152 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 Q6ZTI0 123 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 CSNK1G2-AS1Q8NCQ2 148 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 TIMM21Q9BVV7 248 aa8.56□□□□□ -1.04
CTCFL-209ENST00000433949 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
CTCFL-209ENST00000433949 LEPROTO15243 131 aa8.55□□□□□ -1.04
CTCFL-209ENST00000433949 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
CTCFL-209ENST00000433949 RPL35AP18077 110 aaKnown RBP8.55□□□□□ -1.04
CTCFL-209ENST00000433949 SMAGPQ0VAQ4 97 aa8.55□□□□□ -1.04
CTCFL-209ENST00000433949 DAZ4Q86SG3 579 aaKnown RBP8.55□□□□□ -1.04
CTCFL-209ENST00000433949 ZNF479Q96JC4 524 aa8.55□□□□□ -1.04
CTCFL-209ENST00000433949 DAZ3Q9NR90 486 aaKnown RBP8.55□□□□□ -1.04
CTCFL-209ENST00000433949 Q9UF83 564 aa8.55□□□□□ -1.04
CTCFL-209ENST00000433949 K7EP13 123 aa8.54□□□□□ -1.04
CTCFL-209ENST00000433949 FABP2P12104 132 aa8.54□□□□□ -1.04
CTCFL-209ENST00000433949 RBX1P62877 108 aa8.54□□□□□ -1.04
CTCFL-209ENST00000433949 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
CTCFL-209ENST00000433949 PHLDA1Q8WV24 401 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms