RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 IMMP2LQ96T52 175 aa10.48□□□□□ -0.73
TREX1-201ENST00000433541 TRBV6-5A0A0K0K1A5 114 aa10.47□□□□□ -0.73
TREX1-201ENST00000433541 D6R8Y8 96 aa10.47□□□□□ -0.73
TREX1-201ENST00000433541 LAGE3Q14657 143 aa10.47□□□□□ -0.73
TREX1-201ENST00000433541 C10orf91Q5T1B1 145 aa10.47□□□□□ -0.73
TREX1-201ENST00000433541 TMEM70Q9BUB7 260 aa10.47□□□□□ -0.73
TREX1-201ENST00000433541 TRAV8-3A0A0A6YYJ7 113 aa10.46□□□□□ -0.73
TREX1-201ENST00000433541 SNAPINO95295 136 aa10.46□□□□□ -0.73
TREX1-201ENST00000433541 FCER1GP30273 86 aa10.46□□□□□ -0.73
TREX1-201ENST00000433541 AMMECR1LQ6DCA0 310 aa10.46□□□□□ -0.73
TREX1-201ENST00000433541 ATRAIDQ6UW56 229 aa10.46□□□□□ -0.73
TREX1-201ENST00000433541 SVBPQ8N300 66 aa10.46□□□□□ -0.73
TREX1-201ENST00000433541 Q8N976 141 aa10.46□□□□□ -0.73
TREX1-201ENST00000433541 UBE2WQ96B02 151 aa10.46□□□□□ -0.73
TREX1-201ENST00000433541 TMEM242Q9NWH2 141 aa10.46□□□□□ -0.73
TREX1-201ENST00000433541 FRAS1Q86XX4 4008 aa10.46□□□□□ -0.73
TREX1-201ENST00000433541 EREGO14944 169 aa10.45□□□□□ -0.74
TREX1-201ENST00000433541 SUMO2P61956 95 aaKnown RBP10.45□□□□□ -0.74
TREX1-201ENST00000433541 ORMDL3Q8N138 153 aa10.45□□□□□ -0.74
TREX1-201ENST00000433541 RMI2Q96E14 147 aa10.45□□□□□ -0.74
TREX1-201ENST00000433541 KIR2DL4Q99706 377 aa10.45□□□□□ -0.74
TREX1-201ENST00000433541 TRAV9-1A0A075B6T8 112 aa10.44□□□□□ -0.74
TREX1-201ENST00000433541 VCYO14598 125 aa10.44□□□□□ -0.74
TREX1-201ENST00000433541 TNFRSF6BO95407 300 aa10.44□□□□□ -0.74
TREX1-201ENST00000433541 PPBPP02775 128 aa10.44□□□□□ -0.74
TREX1-201ENST00000433541 RBX1P62877 108 aa10.44□□□□□ -0.74
TREX1-201ENST00000433541 RNASEKQ6P5S7 137 aaKnown RBP10.44□□□□□ -0.74
TREX1-201ENST00000433541 CLPSL2Q6UWE3 100 aa10.44□□□□□ -0.74
TREX1-201ENST00000433541 NRACQ8N912 160 aa10.44□□□□□ -0.74
TREX1-201ENST00000433541 TM2D2Q9BX73 214 aa10.44□□□□□ -0.74
TREX1-201ENST00000433541 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
TREX1-201ENST00000433541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.43□□□□□ -0.74
TREX1-201ENST00000433541 IGKV2-29A2NJV5 120 aaPredicted RBP10.43□□□□□ -0.74
TREX1-201ENST00000433541 TMEM136Q6ZRR5 245 aa10.43□□□□□ -0.74
TREX1-201ENST00000433541 PRELID3AQ96N28 172 aa10.43□□□□□ -0.74
TREX1-201ENST00000433541 TRBV27A0A0K0K1C4 114 aa10.42□□□□□ -0.74
TREX1-201ENST00000433541 NPYP01303 97 aa10.42□□□□□ -0.74
TREX1-201ENST00000433541 Q0VG73 95 aa10.42□□□□□ -0.74
TREX1-201ENST00000433541 Q6ZRN7 208 aaPredicted RBP10.42□□□□□ -0.74
TREX1-201ENST00000433541 SLC7A5P1Q8MH63 180 aa10.42□□□□□ -0.74
TREX1-201ENST00000433541 C20orf78Q9BR46 151 aa10.42□□□□□ -0.74
TREX1-201ENST00000433541 DNAH10Q8IVF4 4471 aa10.41□□□□□ -0.74
TREX1-201ENST00000433541 TSHBP01222 138 aa10.41□□□□□ -0.74
TREX1-201ENST00000433541 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
TREX1-201ENST00000433541 LINC00269Q8N2A0 174 aa10.41□□□□□ -0.74
TREX1-201ENST00000433541 C1orf43Q9BWL3 253 aa10.41□□□□□ -0.74
TREX1-201ENST00000433541 TMEM101Q96IK0 257 aa10.4□□□□□ -0.74
TREX1-201ENST00000433541 COX11Q9Y6N1 276 aa10.4□□□□□ -0.74
TREX1-201ENST00000433541 TRBV24-1A0A075B6N3 115 aa10.39□□□□□ -0.75
TREX1-201ENST00000433541 IGKV3OR2-268A0A0C4DH90 116 aa10.39□□□□□ -0.75
TREX1-201ENST00000433541 PHOX2AO14813 284 aa10.39□□□□□ -0.75
TREX1-201ENST00000433541 HLA-DQA1P01909 254 aa10.39□□□□□ -0.75
TREX1-201ENST00000433541 SMIM2Q9BVW6 85 aa10.39□□□□□ -0.75
TREX1-201ENST00000433541 MAP1LC3AQ9H492 121 aa10.39□□□□□ -0.75
TREX1-201ENST00000433541 IGLV4-60A0A075B6I1 120 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 LOC389332A0A1B0GUA5 103 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 A0A1B0GUV1 79 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 H7C423 109 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 TCAPO15273 167 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 FGF6P10767 208 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 RAB5AP20339 215 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 REG3AQ06141 175 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 COX19Q49B96 90 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 DGAT2L7PQ6IED9 249 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 SPATA12Q7Z6I5 190 aa10.38□□□□□ -0.75
TREX1-201ENST00000433541 A0A1B0GVY2 172 aa10.37□□□□□ -0.75
TREX1-201ENST00000433541 SMAGPQ0VAQ4 97 aa10.37□□□□□ -0.75
TREX1-201ENST00000433541 MIAQ16674 131 aa10.37□□□□□ -0.75
TREX1-201ENST00000433541 KIAA1644Q3SXP7 199 aa10.37□□□□□ -0.75
TREX1-201ENST00000433541 ENHOQ6UWT2 76 aa10.37□□□□□ -0.75
TREX1-201ENST00000433541 C20orf203Q8NBC4 194 aa10.37□□□□□ -0.75
TREX1-201ENST00000433541 OR5A1Q8NGJ0 315 aa10.37□□□□□ -0.75
TREX1-201ENST00000433541 TMEM18Q96B42 140 aa10.37□□□□□ -0.75
TREX1-201ENST00000433541 DNAH2Q9P225 4427 aa10.37□□□□□ -0.75
TREX1-201ENST00000433541 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
TREX1-201ENST00000433541 IGLV10-54A0A075B6I4 117 aa10.36□□□□□ -0.75
TREX1-201ENST00000433541 A0A087WTM6 91 aa10.36□□□□□ -0.75
TREX1-201ENST00000433541 ZNF25P17030 456 aaPredicted RBP10.36□□□□□ -0.75
TREX1-201ENST00000433541 GNB1LQ9BYB4 327 aa10.36□□□□□ -0.75
TREX1-201ENST00000433541 EPPK1P58107 5090 aaKnown RBP10.36□□□□□ -0.75
TREX1-201ENST00000433541 TGIF2-C20orf24A0A0A6YYL0 155 aa10.35□□□□□ -0.75
TREX1-201ENST00000433541 LECT2O14960 151 aa10.35□□□□□ -0.75
TREX1-201ENST00000433541 MT-ND6P03923 174 aa10.35□□□□□ -0.75
TREX1-201ENST00000433541 RPL32P62910 135 aaKnown RBP10.35□□□□□ -0.75
TREX1-201ENST00000433541 C16orf90A8MZG2 172 aa10.34□□□□□ -0.75
TREX1-201ENST00000433541 ESDP10768 282 aa10.34□□□□□ -0.75
TREX1-201ENST00000433541 FABP9Q0Z7S8 132 aa10.34□□□□□ -0.75
TREX1-201ENST00000433541 BAALCQ8WXS3 180 aa10.34□□□□□ -0.75
TREX1-201ENST00000433541 MRPL18Q9H0U6 180 aaKnown RBP10.34□□□□□ -0.75
TREX1-201ENST00000433541 PRR34Q9NV39 138 aa10.34□□□□□ -0.75
TREX1-201ENST00000433541 TRAPPC1Q9Y5R8 145 aa10.32□□□□□ -0.76
TREX1-201ENST00000433541 DNAH17Q9UFH2 4485 aa10.32□□□□□ -0.76
TREX1-201ENST00000433541 TRAV8-4A0A0B4J246 113 aa10.31□□□□□ -0.76
TREX1-201ENST00000433541 MRPL52Q86TS9 123 aaKnown RBP10.31□□□□□ -0.76
TREX1-201ENST00000433541 Q8N8P6 123 aa10.31□□□□□ -0.76
TREX1-201ENST00000433541 NXT2Q9NPJ8 142 aaKnown RBP10.31□□□□□ -0.76
TREX1-201ENST00000433541 LRCOL1A6NCL2 159 aa10.3□□□□□ -0.76
TREX1-201ENST00000433541 FUSP35637 526 aaKnown RBP eCLIP10.3□□□□□ -0.76
TREX1-201ENST00000433541 KRTAP10-2P60368 255 aa10.3□□□□□ -0.76
TREX1-201ENST00000433541 RPL39P62891 51 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms