RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 INTS1Q8N201 2190 aaKnown RBP2.67□□□□□ -1.98
USP54-206ENST00000433394 NCOA6Q14686 2063 aaPredicted RBP2.67□□□□□ -1.98
USP54-206ENST00000433394 ZGRF1Q86YA3 2104 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 SPTBN1Q01082 2364 aaKnown RBP2.66□□□□□ -1.98
USP54-206ENST00000433394 MED12Q93074 2177 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 FAM208BQ5VWN6 2430 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 ITPR1Q14643 2758 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 PGLYRP1O75594 196 aaPredicted RBP2.66□□□□□ -1.98
USP54-206ENST00000433394 IGLC1P0CG04 106 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 HLA-DRB4P13762 266 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 FXYD6P3P58550 94 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 YPEL3P61236 119 aaPredicted RBP2.66□□□□□ -1.98
USP54-206ENST00000433394 PCBD1P61457 104 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 UBE2BP63146 152 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 QRFPP83859 136 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 DEFB109BQ30KR1 87 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 C10orf128Q5T292 105 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 AAED1Q7RTV5 226 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 FDCSPQ8NFU4 85 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 H1FXQ92522 213 aaKnown RBP2.66□□□□□ -1.98
USP54-206ENST00000433394 DPH3Q96FX2 82 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 REG4Q9BYZ8 158 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 UQCR10Q9UDW1 63 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 HLA-DRB4X5D2U9 266 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 PCNX1Q96RV3 2341 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 FRYQ5TBA9 3013 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 MED12LQ86YW9 2145 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 ATMQ13315 3056 aa2.66□□□□□ -1.98
USP54-206ENST00000433394 ZZEF1O43149 2961 aa2.65□□□□□ -1.98
USP54-206ENST00000433394 KALRNO60229 2985 aa2.65□□□□□ -1.98
USP54-206ENST00000433394 TRAV12-2A0A075B6T6 113 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 FAM24AA6NFZ4 105 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 H3BQ15 152 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 H7C2G1 150 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 LEPROTO15243 131 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 MRPL33O75394 65 aaKnown RBP2.65□□□□□ -1.99
USP54-206ENST00000433394 TCRAP04437 139 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 MSMBP08118 114 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 SLC25A4P12235 298 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 FABP4P15090 132 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 NFYAP23511 347 aaPredicted RBP2.65□□□□□ -1.99
USP54-206ENST00000433394 HBBP68871 147 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 DIAPH2-AS1Q14236 149 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 FAM27BQ5VT28 67 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 Q6AWC8 147 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 XAF1Q6GPH4 301 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 OR2T2Q6IF00 324 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 ALKAL2Q6UX46 152 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 BPIFA4PQ86YQ2 179 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 RPP25LQ8N5L8 163 aaKnown RBP2.65□□□□□ -1.99
USP54-206ENST00000433394 OTOSQ8NHW6 89 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 Q96M85 177 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 ZNF714Q96N38 554 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 CELSR3Q9NYQ7 3312 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 ASPMQ8IZT6 3477 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 PLCE1Q9P212 2302 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 IGSF10Q6WRI0 2623 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 USP24Q9UPU5 2620 aa2.65□□□□□ -1.99
USP54-206ENST00000433394 HIVEP3Q5T1R4 2406 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 FREM1Q5H8C1 2179 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 DIDO1Q9BTC0 2240 aaKnown RBP2.64□□□□□ -1.99
USP54-206ENST00000433394 LRRK2Q5S007 2527 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 TRAV1-2A0A0B4J238 106 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 TRBV27A0A0K0K1C4 114 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 ZNF727A8MUV8 499 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 H3BT86 120 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 TMEM256-PLSCR3K7ERE1 68 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 M0R378 163 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 HIST1H2BKO60814 126 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 SNCGO76070 127 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 CYB5AP00167 134 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 PRM2P04554 102 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 HIST1H2BJP06899 126 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 CXCL1P09341 107 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 TPT1P13693 172 aaKnown RBP2.64□□□□□ -1.99
USP54-206ENST00000433394 SNCAP37840 140 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 CCL20P78556 96 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 HMGN3Q15651 99 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 Q5BKY6 102 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 LINC01590Q5TEZ4 76 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 Q6ZUT4 128 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 HIST3H2BBQ8N257 126 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 WFDC11Q8NEX6 87 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 SPTSSAQ969W0 71 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 LINC00526Q96FQ7 95 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 ZC2HC1AQ96GY0 325 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 PRELID3AQ96N28 172 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 AGPAT4-IT1Q9H0P7 198 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 LSM2Q9Y333 95 aaKnown RBP2.64□□□□□ -1.99
USP54-206ENST00000433394 CFAP46Q8IYW2 2715 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 RTTNQ86VV8 2226 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 ZFHX4Q86UP3 3567 aa2.64□□□□□ -1.99
USP54-206ENST00000433394 ESPL1Q14674 2120 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 LAMA5O15230 3695 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 DOPEY1Q5JWR5 2465 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 CACNA1BQ00975 2339 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 ZFYVE26Q68DK2 2539 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 TMSB15BA0A087X1C1 80 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms