RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 C11orf52Q96A22 123 aa9.41□□□□□ -0.9
PRKDC-203ENST00000432581 NIT2Q9NQR4 276 aa9.41□□□□□ -0.9
PRKDC-203ENST00000432581 RPS10P46783 165 aaKnown RBP9.4□□□□□ -0.9
PRKDC-203ENST00000432581 AMTP48728 403 aa9.4□□□□□ -0.9
PRKDC-203ENST00000432581 CENPWQ5EE01 88 aa9.4□□□□□ -0.9
PRKDC-203ENST00000432581 SMIM12Q96EX1 92 aa9.4□□□□□ -0.9
PRKDC-203ENST00000432581 MANBALQ9NQG1 85 aa9.4□□□□□ -0.9
PRKDC-203ENST00000432581 NDUFS6O75380 124 aaKnown RBP9.39□□□□□ -0.91
PRKDC-203ENST00000432581 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
PRKDC-203ENST00000432581 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
PRKDC-203ENST00000432581 GAGE12HA6NDE8 117 aa9.38□□□□□ -0.91
PRKDC-203ENST00000432581 SMLR1H3BR10 107 aa9.38□□□□□ -0.91
PRKDC-203ENST00000432581 EIF5AP63241 154 aaKnown RBP9.38□□□□□ -0.91
PRKDC-203ENST00000432581 COX6A2Q02221 97 aa9.38□□□□□ -0.91
PRKDC-203ENST00000432581 GNG13Q9P2W3 67 aa9.38□□□□□ -0.91
PRKDC-203ENST00000432581 TNXBP22105 4242 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 hCG_2014768A0A024R1R8 64 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 KANTRA0A1W2PQU2 76 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 BCL2L11O43521 198 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 IFNA1P01562 189 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 CCL20P78556 96 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 MAJINQ3KP22 176 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 BIN3Q9NQY0 253 aa9.37□□□□□ -0.91
PRKDC-203ENST00000432581 LRP2P98164 4655 aa9.36□□□□□ -0.91
PRKDC-203ENST00000432581 HMSDA8MTL9 139 aa9.36□□□□□ -0.91
PRKDC-203ENST00000432581 NTF3P20783 257 aa9.36□□□□□ -0.91
PRKDC-203ENST00000432581 GNG4P50150 75 aa9.36□□□□□ -0.91
PRKDC-203ENST00000432581 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
PRKDC-203ENST00000432581 HIGD2BQ4VC39 106 aa9.36□□□□□ -0.91
PRKDC-203ENST00000432581 GVQW2A0A096LPI5 108 aaPredicted RBP9.35□□□□□ -0.91
PRKDC-203ENST00000432581 TRAV1-1A0A0B4J248 108 aa9.35□□□□□ -0.91
PRKDC-203ENST00000432581 IGKV2-24A0A0C4DH68 120 aa9.35□□□□□ -0.91
PRKDC-203ENST00000432581 IGKV3OR2-268A0A0C4DH90 116 aa9.35□□□□□ -0.91
PRKDC-203ENST00000432581 AMMECR1LQ6DCA0 310 aa9.35□□□□□ -0.91
PRKDC-203ENST00000432581 C9orf62Q8N4C0 152 aa9.35□□□□□ -0.91
PRKDC-203ENST00000432581 STPG4Q8N801 248 aa9.35□□□□□ -0.91
PRKDC-203ENST00000432581 PRSS3P2Q8NHM4 247 aa9.35□□□□□ -0.91
PRKDC-203ENST00000432581 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
PRKDC-203ENST00000432581 TEX46H3BTG2 121 aa9.34□□□□□ -0.91
PRKDC-203ENST00000432581 NCR2O95944 276 aa9.34□□□□□ -0.91
PRKDC-203ENST00000432581 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
PRKDC-203ENST00000432581 PKIGQ9Y2B9 76 aa9.34□□□□□ -0.91
PRKDC-203ENST00000432581 RAB19A4D1S5 217 aa9.33□□□□□ -0.92
PRKDC-203ENST00000432581 H7C423 109 aa9.33□□□□□ -0.92
PRKDC-203ENST00000432581 PDE6DO43924 150 aa9.33□□□□□ -0.92
PRKDC-203ENST00000432581 CTRLP40313 264 aa9.33□□□□□ -0.92
PRKDC-203ENST00000432581 TWIST1Q15672 202 aa9.33□□□□□ -0.92
PRKDC-203ENST00000432581 GATD1Q8NB37 220 aa9.33□□□□□ -0.92
PRKDC-203ENST00000432581 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
PRKDC-203ENST00000432581 MEF2BQ02080 365 aaPredicted RBP9.32□□□□□ -0.92
PRKDC-203ENST00000432581 RNASEKQ6P5S7 137 aaKnown RBP9.32□□□□□ -0.92
PRKDC-203ENST00000432581 A0A0J9YXV3 536 aa9.31□□□□□ -0.92
PRKDC-203ENST00000432581 REG3GQ6UW15 175 aa9.31□□□□□ -0.92
PRKDC-203ENST00000432581 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
PRKDC-203ENST00000432581 LYPD6BQ8NI32 183 aa9.31□□□□□ -0.92
PRKDC-203ENST00000432581 MED9Q9NWA0 146 aa9.31□□□□□ -0.92
PRKDC-203ENST00000432581 TRBV20OR9-2A0A075B6H5 130 aa9.3□□□□□ -0.92
PRKDC-203ENST00000432581 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.3□□□□□ -0.92
PRKDC-203ENST00000432581 A0A096LNI7 61 aa9.3□□□□□ -0.92
PRKDC-203ENST00000432581 TRAV26-2A0A0B4J265 109 aa9.3□□□□□ -0.92
PRKDC-203ENST00000432581 IGKV2-29A2NJV5 120 aaPredicted RBP9.3□□□□□ -0.92
PRKDC-203ENST00000432581 APCSP02743 223 aa9.3□□□□□ -0.92
PRKDC-203ENST00000432581 FGF6P10767 208 aa9.3□□□□□ -0.92
PRKDC-203ENST00000432581 FOXI1Q12951 378 aa9.3□□□□□ -0.92
PRKDC-203ENST00000432581 NUDT10Q8NFP7 164 aa9.3□□□□□ -0.92
PRKDC-203ENST00000432581 NUDT11Q96G61 164 aa9.3□□□□□ -0.92
PRKDC-203ENST00000432581 ZNF25P17030 456 aaPredicted RBP9.29□□□□□ -0.92
PRKDC-203ENST00000432581 EIF5AL1Q6IS14 154 aaKnown RBP9.29□□□□□ -0.92
PRKDC-203ENST00000432581 TEX261Q6UWH6 196 aa9.29□□□□□ -0.92
PRKDC-203ENST00000432581 SMIM15Q7Z3B0 74 aa9.29□□□□□ -0.92
PRKDC-203ENST00000432581 KRTAP10-8P60410 259 aa9.28□□□□□ -0.92
PRKDC-203ENST00000432581 OR5A1Q8NGJ0 315 aa9.28□□□□□ -0.92
PRKDC-203ENST00000432581 RPL39LQ96EH5 51 aaKnown RBP9.28□□□□□ -0.92
PRKDC-203ENST00000432581 TMEM101Q96IK0 257 aa9.28□□□□□ -0.92
PRKDC-203ENST00000432581 RPP21Q9H633 154 aaKnown RBP9.28□□□□□ -0.92
PRKDC-203ENST00000432581 IGHV1-58A0A0C4DH39 117 aa9.27□□□□□ -0.93
PRKDC-203ENST00000432581 SDHAF1A6NFY7 115 aa9.27□□□□□ -0.93
PRKDC-203ENST00000432581 BCL2P10415 239 aa9.27□□□□□ -0.93
PRKDC-203ENST00000432581 XCL1P47992 114 aa9.27□□□□□ -0.93
PRKDC-203ENST00000432581 BTF3L4Q96K17 158 aa9.27□□□□□ -0.93
PRKDC-203ENST00000432581 CARD19Q96LW7 228 aa9.27□□□□□ -0.93
PRKDC-203ENST00000432581 RNF213Q63HN8 5207 aa9.26□□□□□ -0.93
PRKDC-203ENST00000432581 Q6ZRP5 223 aa9.26□□□□□ -0.93
PRKDC-203ENST00000432581 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
PRKDC-203ENST00000432581 I3L3M4 83 aa9.25□□□□□ -0.93
PRKDC-203ENST00000432581 CCL25O15444 150 aa9.25□□□□□ -0.93
PRKDC-203ENST00000432581 TAGLN2P37802 199 aaKnown RBP9.25□□□□□ -0.93
PRKDC-203ENST00000432581 ODF1Q14990 250 aa9.25□□□□□ -0.93
PRKDC-203ENST00000432581 AKAP14Q86UN6 197 aa9.25□□□□□ -0.93
PRKDC-203ENST00000432581 FAM210AQ96ND0 272 aa9.25□□□□□ -0.93
PRKDC-203ENST00000432581 RNASE7Q9H1E1 156 aaKnown RBP9.25□□□□□ -0.93
PRKDC-203ENST00000432581 PMCHP20382 165 aa9.24□□□□□ -0.93
PRKDC-203ENST00000432581 SRSF9Q13242 221 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRKDC-203ENST00000432581 TRBV6-5A0A0K0K1A5 114 aa9.23□□□□□ -0.93
PRKDC-203ENST00000432581 FAM231BA6NCW3 169 aa9.23□□□□□ -0.93
PRKDC-203ENST00000432581 ZNF561-AS1K7EIQ3 104 aa9.23□□□□□ -0.93
PRKDC-203ENST00000432581 K7EN84 100 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms