RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 KRTAP10-3P60369 221 aa10.06□□□□□ -0.8
HOXC4-202ENST00000430889 CHCHD7Q9BUK0 85 aa10.06□□□□□ -0.8
HOXC4-202ENST00000430889 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
HOXC4-202ENST00000430889 MTORP42345 2549 aa10.06□□□□□ -0.8
HOXC4-202ENST00000430889 SAP30O75446 220 aa10.05□□□□□ -0.8
HOXC4-202ENST00000430889 CRYBA4P53673 196 aa10.05□□□□□ -0.8
HOXC4-202ENST00000430889 TSPEAR-AS2P59090 65 aa10.05□□□□□ -0.8
HOXC4-202ENST00000430889 A0A1B0GWB2 263 aa10.04□□□□□ -0.8
HOXC4-202ENST00000430889 LY6G6DO95868 133 aa10.04□□□□□ -0.8
HOXC4-202ENST00000430889 SMIM13P0DJ93 91 aa10.04□□□□□ -0.8
HOXC4-202ENST00000430889 HERVK_113P61574 105 aa10.04□□□□□ -0.8
HOXC4-202ENST00000430889 ZNF815PA8K554 130 aa10.03□□□□□ -0.8
HOXC4-202ENST00000430889 H3BUT2 72 aa10.03□□□□□ -0.8
HOXC4-202ENST00000430889 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
HOXC4-202ENST00000430889 TMEM263Q8WUH6 116 aaKnown RBP10.03□□□□□ -0.8
HOXC4-202ENST00000430889 PLEKHB2Q96CS7 222 aa10.03□□□□□ -0.8
HOXC4-202ENST00000430889 TMEM223A0PJW6 202 aa10.02□□□□□ -0.8
HOXC4-202ENST00000430889 PLAC8L1A1L4L8 177 aa10.02□□□□□ -0.8
HOXC4-202ENST00000430889 ZNF22P17026 224 aaPredicted RBP10.02□□□□□ -0.8
HOXC4-202ENST00000430889 NDUFA11Q86Y39 141 aa10.02□□□□□ -0.8
HOXC4-202ENST00000430889 OR4C5Q8NGB2 326 aa10.02□□□□□ -0.8
HOXC4-202ENST00000430889 WFDC10AQ9H1F0 79 aa10.02□□□□□ -0.8
HOXC4-202ENST00000430889 A0A1W2PPM0 123 aa10.02□□□□□ -0.81
HOXC4-202ENST00000430889 K7EP34 96 aa10.02□□□□□ -0.81
HOXC4-202ENST00000430889 K7ERJ3 54 aa10.02□□□□□ -0.81
HOXC4-202ENST00000430889 CSNK1G2-AS1Q8NCQ2 148 aa10.02□□□□□ -0.81
HOXC4-202ENST00000430889 RAB37Q96AX2 223 aa10.02□□□□□ -0.81
HOXC4-202ENST00000430889 DAZ2Q13117 558 aaKnown RBP10.01□□□□□ -0.81
HOXC4-202ENST00000430889 TMEM170BQ5T4T1 132 aa10.01□□□□□ -0.81
HOXC4-202ENST00000430889 HIST1H4GQ99525 98 aa10.01□□□□□ -0.81
HOXC4-202ENST00000430889 NAA38Q9BRA0 125 aaKnown RBP10.01□□□□□ -0.81
HOXC4-202ENST00000430889 VCX2Q9H322 139 aa10.01□□□□□ -0.81
HOXC4-202ENST00000430889 NHP2Q9NX24 153 aaKnown RBP10.01□□□□□ -0.81
HOXC4-202ENST00000430889 UBE2D4Q9Y2X8 147 aa10.01□□□□□ -0.81
HOXC4-202ENST00000430889 NIPBLQ6KC79 2804 aaeCLIP10□□□□□ -0.81
HOXC4-202ENST00000430889 A0A0J9YXV3 536 aa10□□□□□ -0.81
HOXC4-202ENST00000430889 A0A0J9YY99 117 aa10□□□□□ -0.81
HOXC4-202ENST00000430889 MRPS36P82909 103 aaKnown RBP10□□□□□ -0.81
HOXC4-202ENST00000430889 C12orf74Q32Q52 190 aa10□□□□□ -0.81
HOXC4-202ENST00000430889 SPANXA1Q9NS26 97 aa10□□□□□ -0.81
HOXC4-202ENST00000430889 IGHV3OR16-12A0A075B7B8 117 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 TRGV1A0A0A0MS02 117 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 TRAV4A0A0B4J268 109 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 LEPROTO15243 131 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 Q6ZTI0 123 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 HIVEP2P31629 2446 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 NOTCH2Q04721 2471 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 J3QQQ9 107 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 SAMD5Q5TGI4 173 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 ZNF479Q96JC4 524 aa9.99□□□□□ -0.81
HOXC4-202ENST00000430889 SPANXB1Q9NS25 103 aaPredicted RBP9.99□□□□□ -0.81
HOXC4-202ENST00000430889 TRBV10-1A0A0K0K1A3 114 aa9.98□□□□□ -0.81
HOXC4-202ENST00000430889 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
HOXC4-202ENST00000430889 CEMP1Q6PRD7 247 aaPredicted RBP9.98□□□□□ -0.81
HOXC4-202ENST00000430889 GTF2H5Q6ZYL4 71 aa9.98□□□□□ -0.81
HOXC4-202ENST00000430889 OTOGQ6ZRI0 2925 aa9.98□□□□□ -0.81
HOXC4-202ENST00000430889 SETD2Q9BYW2 2564 aaPredicted RBP9.98□□□□□ -0.81
HOXC4-202ENST00000430889 IGLL5B9A064 214 aa9.97□□□□□ -0.81
HOXC4-202ENST00000430889 COTL1Q14019 142 aa9.97□□□□□ -0.81
HOXC4-202ENST00000430889 C16orf74Q96GX8 76 aa9.97□□□□□ -0.81
HOXC4-202ENST00000430889 OVOL2Q9BRP0 275 aa9.97□□□□□ -0.81
HOXC4-202ENST00000430889 TIMM21Q9BVV7 248 aa9.97□□□□□ -0.81
HOXC4-202ENST00000430889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.96□□□□□ -0.81
HOXC4-202ENST00000430889 IGHV3-38A0A0C4DH36 116 aa9.96□□□□□ -0.81
HOXC4-202ENST00000430889 IGKV2-29A2NJV5 120 aaPredicted RBP9.96□□□□□ -0.81
HOXC4-202ENST00000430889 K7EQD1 137 aa9.96□□□□□ -0.81
HOXC4-202ENST00000430889 UBE2D1P51668 147 aa9.96□□□□□ -0.81
HOXC4-202ENST00000430889 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.81
HOXC4-202ENST00000430889 C1QTNF4Q9BXJ3 329 aa9.96□□□□□ -0.81
HOXC4-202ENST00000430889 RPL35AP18077 110 aaKnown RBP9.96□□□□□ -0.82
HOXC4-202ENST00000430889 SCGB1D4Q6XE38 83 aa9.96□□□□□ -0.82
HOXC4-202ENST00000430889 Q6ZUT4 128 aa9.96□□□□□ -0.82
HOXC4-202ENST00000430889 TINCRA0A1B0GVN0 87 aa9.95□□□□□ -0.82
HOXC4-202ENST00000430889 FABP2P12104 132 aa9.95□□□□□ -0.82
HOXC4-202ENST00000430889 SBSPONQ8IVN8 264 aa9.95□□□□□ -0.82
HOXC4-202ENST00000430889 NOP10Q9NPE3 64 aaKnown RBP9.95□□□□□ -0.82
HOXC4-202ENST00000430889 SPCS1Q9Y6A9 102 aa9.95□□□□□ -0.82
HOXC4-202ENST00000430889 MAST4O15021 2626 aa9.94□□□□□ -0.82
HOXC4-202ENST00000430889 GAGE12BA1L429 117 aa9.94□□□□□ -0.82
HOXC4-202ENST00000430889 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
HOXC4-202ENST00000430889 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
HOXC4-202ENST00000430889 UBE2D3P61077 147 aa9.94□□□□□ -0.82
HOXC4-202ENST00000430889 UBE2D2P62837 147 aa9.94□□□□□ -0.82
HOXC4-202ENST00000430889 JMJD1CQ15652 2540 aa9.94□□□□□ -0.82
HOXC4-202ENST00000430889 CYSRT1A8MQ03 144 aa9.93□□□□□ -0.82
HOXC4-202ENST00000430889 INAFM1C9JVW0 142 aa9.93□□□□□ -0.82
HOXC4-202ENST00000430889 LGALS3P17931 250 aaKnown RBP9.93□□□□□ -0.82
HOXC4-202ENST00000430889 RRN3P1Q2M238 152 aa9.93□□□□□ -0.82
HOXC4-202ENST00000430889 RNASE13Q5GAN3 156 aaKnown RBP9.93□□□□□ -0.82
HOXC4-202ENST00000430889 NTM-AS1Q6ZSK4 140 aa9.93□□□□□ -0.82
HOXC4-202ENST00000430889 IGLV5-45A0A087WSX0 123 aa9.93□□□□□ -0.82
HOXC4-202ENST00000430889 CIDEAO60543 219 aa9.93□□□□□ -0.82
HOXC4-202ENST00000430889 RPL36AP83881 106 aaKnown RBP9.93□□□□□ -0.82
HOXC4-202ENST00000430889 DAZ4Q86SG3 579 aaKnown RBP9.93□□□□□ -0.82
HOXC4-202ENST00000430889 RPL36ALQ969Q0 106 aaKnown RBP9.93□□□□□ -0.82
HOXC4-202ENST00000430889 DAZ3Q9NR90 486 aaKnown RBP9.93□□□□□ -0.82
HOXC4-202ENST00000430889 IGHV3-30-3P0DP02 117 aa9.92□□□□□ -0.82
HOXC4-202ENST00000430889 FAM19A3Q7Z5A8 133 aa9.92□□□□□ -0.82
HOXC4-202ENST00000430889 C10orf126Q8N4M7 172 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms