RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 RPL39LQ96EH5 51 aaKnown RBP6.93□□□□□ -1.3
ATG4B-212ENST00000430617 URB1-AS1Q96HZ7 61 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 TRBV6-5A0A0K0K1A5 114 aa6.92□□□□□ -1.3
ATG4B-212ENST00000430617 CIDEAO60543 219 aa6.92□□□□□ -1.3
ATG4B-212ENST00000430617 TNFRSF6BO95407 300 aa6.92□□□□□ -1.3
ATG4B-212ENST00000430617 SPART-AS1P0CW21 52 aa6.92□□□□□ -1.3
ATG4B-212ENST00000430617 DEFB130BP0DP73 79 aa6.92□□□□□ -1.3
ATG4B-212ENST00000430617 DEFB130AP0DP74 79 aa6.92□□□□□ -1.3
ATG4B-212ENST00000430617 PRSS47A8MTI9 375 aa6.91□□□□□ -1.3
ATG4B-212ENST00000430617 FAM229AH3BQW9 127 aa6.91□□□□□ -1.3
ATG4B-212ENST00000430617 K7EQD1 137 aa6.91□□□□□ -1.3
ATG4B-212ENST00000430617 S100A6P06703 90 aa6.91□□□□□ -1.3
ATG4B-212ENST00000430617 RPL32P62910 135 aaKnown RBP6.91□□□□□ -1.3
ATG4B-212ENST00000430617 FHL2Q14192 279 aa6.91□□□□□ -1.3
ATG4B-212ENST00000430617 FAT3Q8TDW7 4589 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 C5orf52A6NGY3 159 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 F5H697 171 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 H7C1H1 209 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 SERF1AO75920 110 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 PPP1R17O96001 155 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 LINC00694P0DN24 101 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 ESDP10768 282 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 HOXA5P20719 270 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 DAD1P61803 113 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 SUMO2P61956 95 aaKnown RBP6.9□□□□□ -1.3
ATG4B-212ENST00000430617 C20orf78Q9BR46 151 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 SMIM2Q9BVW6 85 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 MAP1LC3AQ9H492 121 aa6.9□□□□□ -1.3
ATG4B-212ENST00000430617 TRBV10-1A0A0K0K1A3 114 aa6.89□□□□□ -1.31
ATG4B-212ENST00000430617 TRBV6-4A0A1B0GX49 114 aa6.89□□□□□ -1.31
ATG4B-212ENST00000430617 LINC01546A6NGU7 62 aa6.89□□□□□ -1.31
ATG4B-212ENST00000430617 NDUFA6P56556 154 aa6.89□□□□□ -1.31
ATG4B-212ENST00000430617 SLC25A29Q8N8R3 303 aa6.89□□□□□ -1.31
ATG4B-212ENST00000430617 NEXN-AS1Q8NBZ9 246 aa6.89□□□□□ -1.31
ATG4B-212ENST00000430617 TMEM70Q9BUB7 260 aa6.89□□□□□ -1.31
ATG4B-212ENST00000430617 NIT2Q9NQR4 276 aa6.89□□□□□ -1.31
ATG4B-212ENST00000430617 Q9UF83 564 aa6.89□□□□□ -1.31
ATG4B-212ENST00000430617 LINC00588Q9Y4M8 146 aa6.89□□□□□ -1.31
ATG4B-212ENST00000430617 TRGV4A0A0C4DH28 118 aa6.88□□□□□ -1.31
ATG4B-212ENST00000430617 NUPR1O60356 82 aa6.88□□□□□ -1.31
ATG4B-212ENST00000430617 ATP5G1P05496 136 aa6.88□□□□□ -1.31
ATG4B-212ENST00000430617 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
ATG4B-212ENST00000430617 POLR2KP53803 58 aaKnown RBP6.88□□□□□ -1.31
ATG4B-212ENST00000430617 SNRPEP62304 92 aaKnown RBP6.88□□□□□ -1.31
ATG4B-212ENST00000430617 RHOHQ15669 191 aa6.88□□□□□ -1.31
ATG4B-212ENST00000430617 BAGE3Q86Y29 109 aa6.88□□□□□ -1.31
ATG4B-212ENST00000430617 Q8N8P6 123 aa6.88□□□□□ -1.31
ATG4B-212ENST00000430617 DNAJC30Q96LL9 226 aa6.88□□□□□ -1.31
ATG4B-212ENST00000430617 PGPEP1Q9NXJ5 209 aa6.88□□□□□ -1.31
ATG4B-212ENST00000430617 LRP2P98164 4655 aa6.87□□□□□ -1.31
ATG4B-212ENST00000430617 TRBV27A0A0K0K1C4 114 aa6.87□□□□□ -1.31
ATG4B-212ENST00000430617 LOC389332A0A1B0GUA5 103 aa6.87□□□□□ -1.31
ATG4B-212ENST00000430617 SDHAF1A6NFY7 115 aa6.87□□□□□ -1.31
ATG4B-212ENST00000430617 PMCHP20382 165 aa6.87□□□□□ -1.31
ATG4B-212ENST00000430617 CRYBA4P53673 196 aa6.87□□□□□ -1.31
ATG4B-212ENST00000430617 RNASEKQ6P5S7 137 aaKnown RBP6.87□□□□□ -1.31
ATG4B-212ENST00000430617 HIST3H2BBQ8N257 126 aa6.87□□□□□ -1.31
ATG4B-212ENST00000430617 C15orf53Q8NAA6 179 aa6.87□□□□□ -1.31
ATG4B-212ENST00000430617 CHCHD1Q96BP2 118 aaKnown RBP6.87□□□□□ -1.31
ATG4B-212ENST00000430617 ST20Q9HBF5 79 aa6.87□□□□□ -1.31
ATG4B-212ENST00000430617 NXT2Q9NPJ8 142 aaKnown RBP6.87□□□□□ -1.31
ATG4B-212ENST00000430617 A0A096LNJ9 63 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 LOC100131303A0A0U1RQF7 123 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 IFITM10A6NMD0 228 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 UBE2D3P61077 147 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 UBE2D2P62837 147 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 NEGR1Q7Z3B1 354 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 NIT1Q86X76 327 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 VSIG2Q96IQ7 327 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 Q9H8V8 135 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 AP5S1Q9NUS5 200 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 PRO0255Q9UI72 69 aa6.86□□□□□ -1.31
ATG4B-212ENST00000430617 TRBV7-3A0A075B6L6 115 aa6.85□□□□□ -1.31
ATG4B-212ENST00000430617 IGHV1-24A0A0C4DH33 117 aa6.85□□□□□ -1.31
ATG4B-212ENST00000430617 TSHBP01222 138 aa6.85□□□□□ -1.31
ATG4B-212ENST00000430617 LINC00614P0C842 121 aa6.85□□□□□ -1.31
ATG4B-212ENST00000430617 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
ATG4B-212ENST00000430617 FA2HQ7L5A8 372 aa6.85□□□□□ -1.31
ATG4B-212ENST00000430617 PRSS3P2Q8NHM4 247 aa6.85□□□□□ -1.31
ATG4B-212ENST00000430617 HHLA3Q9XRX5 114 aa6.85□□□□□ -1.31
ATG4B-212ENST00000430617 GAGE12JA6NER3 117 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 K7EMI3 77 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 HSBP1O75506 76 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 NUDT3O95989 172 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 CCL18P55774 89 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 RPL36AP83881 106 aaKnown RBP6.84□□□□□ -1.31
ATG4B-212ENST00000430617 GAGE1Q13065 139 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 GAGE4Q13068 117 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 GAGE5Q13069 117 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 GAGE13Q4V321 117 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 PDZD11Q5EBL8 140 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 CDPF1Q6NVV7 123 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 RPL36ALQ969Q0 106 aaKnown RBP6.84□□□□□ -1.31
ATG4B-212ENST00000430617 PRADC1Q9BSG0 188 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 TNFRSF18Q9Y5U5 241 aa6.84□□□□□ -1.31
ATG4B-212ENST00000430617 TRAV26-1A0A087WT03 109 aa6.83□□□□□ -1.32
ATG4B-212ENST00000430617 F5H768 121 aa6.83□□□□□ -1.32
ATG4B-212ENST00000430617 I3L3M4 83 aa6.83□□□□□ -1.32
ATG4B-212ENST00000430617 VCYO14598 125 aa6.83□□□□□ -1.32
ATG4B-212ENST00000430617 TCAPO15273 167 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms