RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 PKIAP61925 76 aa10.95□□□□□ -0.66
CPSF4-203ENST00000430038 EIF5AL1Q6IS14 154 aaKnown RBP10.95□□□□□ -0.66
CPSF4-203ENST00000430038 SLC51BQ86UW2 128 aa10.95□□□□□ -0.66
CPSF4-203ENST00000430038 GTSF1Q8WW33 167 aa10.95□□□□□ -0.66
CPSF4-203ENST00000430038 H7C1H1 209 aa10.94□□□□□ -0.66
CPSF4-203ENST00000430038 TMEM243Q9BU79 118 aa10.94□□□□□ -0.66
CPSF4-203ENST00000430038 CNFNQ9BYD5 112 aa10.94□□□□□ -0.66
CPSF4-203ENST00000430038 TEX46H3BTG2 121 aa10.93□□□□□ -0.66
CPSF4-203ENST00000430038 TRGC1P0CF51 173 aa10.93□□□□□ -0.66
CPSF4-203ENST00000430038 WDR73Q6P4I2 378 aa10.93□□□□□ -0.66
CPSF4-203ENST00000430038 RPL39LQ96EH5 51 aaKnown RBP10.93□□□□□ -0.66
CPSF4-203ENST00000430038 PGLYRP4Q96LB8 373 aa10.93□□□□□ -0.66
CPSF4-203ENST00000430038 XKRY2A2RUG3 117 aa10.92□□□□□ -0.66
CPSF4-203ENST00000430038 TWIST1Q15672 202 aa10.92□□□□□ -0.66
CPSF4-203ENST00000430038 RPP21Q9H633 154 aaKnown RBP10.92□□□□□ -0.66
CPSF4-203ENST00000430038 GAS8-AS1O95177 125 aa10.91□□□□□ -0.66
CPSF4-203ENST00000430038 Q6ZNX1 250 aa10.91□□□□□ -0.66
CPSF4-203ENST00000430038 RPL37AP61513 92 aaKnown RBP10.9□□□□□ -0.66
CPSF4-203ENST00000430038 CNBPP62633 177 aaKnown RBP10.9□□□□□ -0.66
CPSF4-203ENST00000430038 TRAV8-4A0A0B4J246 113 aa10.89□□□□□ -0.67
CPSF4-203ENST00000430038 hDV102S1A0JD36 115 aa10.89□□□□□ -0.67
CPSF4-203ENST00000430038 CHTF8P0CG12 524 aa10.89□□□□□ -0.67
CPSF4-203ENST00000430038 AMTP48728 403 aa10.89□□□□□ -0.67
CPSF4-203ENST00000430038 CIRBPQ14011 172 aaKnown RBP10.89□□□□□ -0.67
CPSF4-203ENST00000430038 C15orf56Q8N910 161 aa10.89□□□□□ -0.67
CPSF4-203ENST00000430038 CLRN3Q8NCR9 226 aa10.89□□□□□ -0.67
CPSF4-203ENST00000430038 BIN3Q9NQY0 253 aa10.89□□□□□ -0.67
CPSF4-203ENST00000430038 COTL1Q14019 142 aa10.88□□□□□ -0.67
CPSF4-203ENST00000430038 ALKAL2Q6UX46 152 aa10.88□□□□□ -0.67
CPSF4-203ENST00000430038 OXTP01178 125 aa10.87□□□□□ -0.67
CPSF4-203ENST00000430038 LYPD6BQ8NI32 183 aa10.87□□□□□ -0.67
CPSF4-203ENST00000430038 UBR4Q5T4S7 5183 aa10.87□□□□□ -0.67
CPSF4-203ENST00000430038 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-203ENST00000430038 IGKV3OR2-268A0A0C4DH90 116 aa10.86□□□□□ -0.67
CPSF4-203ENST00000430038 IGKV2-29A2NJV5 120 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-203ENST00000430038 FAM231BA6NCW3 169 aa10.86□□□□□ -0.67
CPSF4-203ENST00000430038 GAGE12HA6NDE8 117 aa10.86□□□□□ -0.67
CPSF4-203ENST00000430038 UBE2L6O14933 153 aa10.85□□□□□ -0.67
CPSF4-203ENST00000430038 GATCO43716 136 aaKnown RBP10.84□□□□□ -0.67
CPSF4-203ENST00000430038 TAGLN2P37802 199 aaKnown RBP10.84□□□□□ -0.67
CPSF4-203ENST00000430038 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
CPSF4-203ENST00000430038 A0A087WYN8 130 aa10.83□□□□□ -0.68
CPSF4-203ENST00000430038 SDHAF1A6NFY7 115 aa10.83□□□□□ -0.68
CPSF4-203ENST00000430038 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
CPSF4-203ENST00000430038 MT1HL1P0DM35 61 aa10.83□□□□□ -0.68
CPSF4-203ENST00000430038 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
CPSF4-203ENST00000430038 IGHV3-64A0A075B6Q5 118 aa10.82□□□□□ -0.68
CPSF4-203ENST00000430038 HIGD2BQ4VC39 106 aa10.82□□□□□ -0.68
CPSF4-203ENST00000430038 SPACA4Q8TDM5 124 aa10.82□□□□□ -0.68
CPSF4-203ENST00000430038 CHCHD10Q8WYQ3 142 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-203ENST00000430038 TNXBP22105 4242 aa10.81□□□□□ -0.68
CPSF4-203ENST00000430038 FGF6P10767 208 aa10.81□□□□□ -0.68
CPSF4-203ENST00000430038 CEBPGP53567 150 aa10.81□□□□□ -0.68
CPSF4-203ENST00000430038 PRSS3P2Q8NHM4 247 aa10.81□□□□□ -0.68
CPSF4-203ENST00000430038 RNF185Q96GF1 192 aa10.81□□□□□ -0.68
CPSF4-203ENST00000430038 TSHBP01222 138 aa10.8□□□□□ -0.68
CPSF4-203ENST00000430038 RPS10P46783 165 aaKnown RBP10.8□□□□□ -0.68
CPSF4-203ENST00000430038 BLOC1S1P78537 153 aa10.8□□□□□ -0.68
CPSF4-203ENST00000430038 COX6A2Q02221 97 aa10.8□□□□□ -0.68
CPSF4-203ENST00000430038 FOXI1Q12951 378 aa10.8□□□□□ -0.68
CPSF4-203ENST00000430038 RNASEKQ6P5S7 137 aaKnown RBP10.8□□□□□ -0.68
CPSF4-203ENST00000430038 AKAP14Q86UN6 197 aa10.8□□□□□ -0.68
CPSF4-203ENST00000430038 TRBV6-5A0A0K0K1A5 114 aa10.79□□□□□ -0.68
CPSF4-203ENST00000430038 A8MWL6 223 aa10.79□□□□□ -0.68
CPSF4-203ENST00000430038 NCR2O95944 276 aa10.79□□□□□ -0.68
CPSF4-203ENST00000430038 ESDP10768 282 aa10.79□□□□□ -0.68
CPSF4-203ENST00000430038 LINC01551Q86U37 167 aa10.79□□□□□ -0.68
CPSF4-203ENST00000430038 AP5S1Q9NUS5 200 aa10.79□□□□□ -0.68
CPSF4-203ENST00000430038 APCSP02743 223 aa10.78□□□□□ -0.68
CPSF4-203ENST00000430038 SERTAD4-AS1Q5TG53 156 aa10.78□□□□□ -0.68
CPSF4-203ENST00000430038 AMMECR1LQ6DCA0 310 aa10.78□□□□□ -0.68
CPSF4-203ENST00000430038 LINC00526Q96FQ7 95 aa10.78□□□□□ -0.68
CPSF4-203ENST00000430038 PLAC8Q9NZF1 115 aa10.78□□□□□ -0.68
CPSF4-203ENST00000430038 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-203ENST00000430038 H7C423 109 aa10.77□□□□□ -0.69
CPSF4-203ENST00000430038 I3L3M4 83 aa10.77□□□□□ -0.69
CPSF4-203ENST00000430038 SRP19P09132 144 aaKnown RBP10.77□□□□□ -0.69
CPSF4-203ENST00000430038 RAB4AP20338 218 aa10.77□□□□□ -0.69
CPSF4-203ENST00000430038 PMCHP20382 165 aa10.77□□□□□ -0.69
CPSF4-203ENST00000430038 POLR2KP53803 58 aaKnown RBP10.77□□□□□ -0.69
CPSF4-203ENST00000430038 CT83Q5H943 113 aa10.77□□□□□ -0.69
CPSF4-203ENST00000430038 DPH3Q96FX2 82 aa10.77□□□□□ -0.69
CPSF4-203ENST00000430038 TMEM242Q9NWH2 141 aa10.77□□□□□ -0.69
CPSF4-203ENST00000430038 HIGD1CA8MV81 97 aa10.76□□□□□ -0.69
CPSF4-203ENST00000430038 TEX261Q6UWH6 196 aa10.76□□□□□ -0.69
CPSF4-203ENST00000430038 SMIM15Q7Z3B0 74 aa10.76□□□□□ -0.69
CPSF4-203ENST00000430038 OR5A1Q8NGJ0 315 aa10.76□□□□□ -0.69
CPSF4-203ENST00000430038 TSKUQ8WUA8 353 aa10.76□□□□□ -0.69
CPSF4-203ENST00000430038 SMIM7Q9BQ49 75 aa10.76□□□□□ -0.69
CPSF4-203ENST00000430038 GVQW2A0A096LPI5 108 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-203ENST00000430038 LINC00959A0A1B0GUT2 108 aa10.75□□□□□ -0.69
CPSF4-203ENST00000430038 SMKR1H3BMG3 65 aa10.75□□□□□ -0.69
CPSF4-203ENST00000430038 PHOX2AO14813 284 aa10.75□□□□□ -0.69
CPSF4-203ENST00000430038 AMN1Q8IY45 258 aa10.75□□□□□ -0.69
CPSF4-203ENST00000430038 FAM210AQ96ND0 272 aa10.75□□□□□ -0.69
CPSF4-203ENST00000430038 TMEM191AQ9H0A3 160 aa10.75□□□□□ -0.69
CPSF4-203ENST00000430038 V9GYV3 84 aa10.75□□□□□ -0.69
CPSF4-203ENST00000430038 A0A1B0GUT8 65 aa10.74□□□□□ -0.69
CPSF4-203ENST00000430038 A0A1B0GVG6 124 aa10.74□□□□□ -0.69
CPSF4-203ENST00000430038 XCL1P47992 114 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms