RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 CSPG4Q6UVK1 2322 aa11.05□□□□□ -0.64
LINC00839-202ENST00000429940 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.05□□□□□ -0.64
LINC00839-202ENST00000429940 AVPP01185 164 aa11.05□□□□□ -0.64
LINC00839-202ENST00000429940 MXRA5Q9NR99 2828 aa11.05□□□□□ -0.64
LINC00839-202ENST00000429940 TRGV11A0A075B6L2 103 aa11.05□□□□□ -0.64
LINC00839-202ENST00000429940 A0A0J9YXY3 114 aa11.05□□□□□ -0.64
LINC00839-202ENST00000429940 M0R2P5 195 aa11.05□□□□□ -0.64
LINC00839-202ENST00000429940 Q1RN00 199 aa11.05□□□□□ -0.64
LINC00839-202ENST00000429940 FLNAP21333 2647 aaKnown RBP11.04□□□□□ -0.64
LINC00839-202ENST00000429940 SPXQ9BT56 116 aa11.04□□□□□ -0.64
LINC00839-202ENST00000429940 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
LINC00839-202ENST00000429940 M0QXV9 152 aa11.04□□□□□ -0.64
LINC00839-202ENST00000429940 IGHV3-30-3P0DP02 117 aa11.04□□□□□ -0.64
LINC00839-202ENST00000429940 CD28P10747 220 aa11.04□□□□□ -0.64
LINC00839-202ENST00000429940 TIMM21Q9BVV7 248 aa11.04□□□□□ -0.64
LINC00839-202ENST00000429940 IGHV4-59P01825 116 aa11.03□□□□□ -0.64
LINC00839-202ENST00000429940 SYNJ2BPP57105 145 aa11.03□□□□□ -0.64
LINC00839-202ENST00000429940 DEFB113Q30KQ7 82 aa11.03□□□□□ -0.64
LINC00839-202ENST00000429940 ACANP16112 2415 aa11.03□□□□□ -0.64
LINC00839-202ENST00000429940 IGHV3-73A0A0B4J1V6 119 aa11.02□□□□□ -0.64
LINC00839-202ENST00000429940 ADARB2-AS1A8MUL3 147 aa11.02□□□□□ -0.64
LINC00839-202ENST00000429940 TMEM262E9PQX1 116 aa11.02□□□□□ -0.64
LINC00839-202ENST00000429940 CREBBPQ92793 2442 aa11.02□□□□□ -0.64
LINC00839-202ENST00000429940 HTN1P15515 57 aa11.02□□□□□ -0.65
LINC00839-202ENST00000429940 PYGO1Q9Y3Y4 419 aa11.02□□□□□ -0.65
LINC00839-202ENST00000429940 ELANEP08246 267 aa11.01□□□□□ -0.65
LINC00839-202ENST00000429940 ATXN8Q156A1 80 aa11.01□□□□□ -0.65
LINC00839-202ENST00000429940 DUX5Q96PT3 197 aa11.01□□□□□ -0.65
LINC00839-202ENST00000429940 MRPS36P82909 103 aaKnown RBP11.01□□□□□ -0.65
LINC00839-202ENST00000429940 CEMP1Q6PRD7 247 aaPredicted RBP11.01□□□□□ -0.65
LINC00839-202ENST00000429940 MYO9AB2RTY4 2548 aa11.01□□□□□ -0.65
LINC00839-202ENST00000429940 TRAV26-1A0A087WT03 109 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 TRAV8-3A0A0A6YYJ7 113 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 TMEM89A2RUT3 159 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 B4DSR2 109 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 RBMY1A1P0DJD3 496 aaKnown RBP11□□□□□ -0.65
LINC00839-202ENST00000429940 RBMY1CP0DJD4 496 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 PROK1P58294 105 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 RBMY1FQ15415 496 aaKnown RBP11□□□□□ -0.65
LINC00839-202ENST00000429940 DEFB112Q30KQ8 113 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 Q5PR19 223 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 FAM104AQ969W3 186 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 CR1P17927 2039 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 RNASE13Q5GAN3 156 aaKnown RBP11□□□□□ -0.65
LINC00839-202ENST00000429940 RNF152Q8N8N0 203 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 LITAFQ99732 161 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 EDA2RQ9HAV5 297 aa11□□□□□ -0.65
LINC00839-202ENST00000429940 BEX4Q9NWD9 120 aaPredicted RBP11□□□□□ -0.65
LINC00839-202ENST00000429940 PRSS2P07478 247 aa10.99□□□□□ -0.65
LINC00839-202ENST00000429940 LINC01620Q4KN68 170 aa10.99□□□□□ -0.65
LINC00839-202ENST00000429940 TNFRSF18Q9Y5U5 241 aa10.99□□□□□ -0.65
LINC00839-202ENST00000429940 NTN5Q8WTR8 489 aaPredicted RBP10.98□□□□□ -0.65
LINC00839-202ENST00000429940 Q96MF0 132 aa10.98□□□□□ -0.65
LINC00839-202ENST00000429940 A0A096LNT2 108 aa10.98□□□□□ -0.65
LINC00839-202ENST00000429940 IGHV1-58A0A0C4DH39 117 aa10.98□□□□□ -0.65
LINC00839-202ENST00000429940 TRBV30A0A0K0K1B3 111 aa10.98□□□□□ -0.65
LINC00839-202ENST00000429940 TRIAP1O43715 76 aa10.98□□□□□ -0.65
LINC00839-202ENST00000429940 KRTAP1-3Q8IUG1 177 aa10.98□□□□□ -0.65
LINC00839-202ENST00000429940 CUBNO60494 3623 aa10.98□□□□□ -0.65
LINC00839-202ENST00000429940 KNCNA6PVL3 124 aa10.97□□□□□ -0.65
LINC00839-202ENST00000429940 WFDC11Q8NEX6 87 aa10.97□□□□□ -0.65
LINC00839-202ENST00000429940 SONP18583 2426 aaKnown RBP10.97□□□□□ -0.65
LINC00839-202ENST00000429940 OTOGQ6ZRI0 2925 aa10.97□□□□□ -0.65
LINC00839-202ENST00000429940 HOXD3P31249 432 aaPredicted RBP10.97□□□□□ -0.65
LINC00839-202ENST00000429940 ADAMTSL4-AS1Q5T5F5 129 aa10.97□□□□□ -0.65
LINC00839-202ENST00000429940 CLUHP3Q96NS8 147 aa10.97□□□□□ -0.65
LINC00839-202ENST00000429940 NDUFA12Q9UI09 145 aa10.97□□□□□ -0.65
LINC00839-202ENST00000429940 ZFAND6Q6FIF0 208 aa10.96□□□□□ -0.65
LINC00839-202ENST00000429940 SPANXDQ9BXN6 97 aa10.96□□□□□ -0.65
LINC00839-202ENST00000429940 SPANXCQ9NY87 97 aa10.96□□□□□ -0.65
LINC00839-202ENST00000429940 GATA3P23771 443 aa10.96□□□□□ -0.66
LINC00839-202ENST00000429940 DSCR9P59020 149 aa10.96□□□□□ -0.66
LINC00839-202ENST00000429940 TRBV10-2A0A0K0K1G8 114 aa10.95□□□□□ -0.66
LINC00839-202ENST00000429940 TINCRA0A1B0GVN0 87 aa10.95□□□□□ -0.66
LINC00839-202ENST00000429940 MIAQ16674 131 aa10.95□□□□□ -0.66
LINC00839-202ENST00000429940 TEX29Q8N6K0 151 aa10.95□□□□□ -0.66
LINC00839-202ENST00000429940 VSIG2Q96IQ7 327 aa10.95□□□□□ -0.66
LINC00839-202ENST00000429940 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
LINC00839-202ENST00000429940 Q9UF83 564 aa10.95□□□□□ -0.66
LINC00839-202ENST00000429940 SETXQ7Z333 2677 aaKnown RBP10.95□□□□□ -0.66
LINC00839-202ENST00000429940 PRM2P04554 102 aa10.95□□□□□ -0.66
LINC00839-202ENST00000429940 ICOSQ9Y6W8 199 aa10.95□□□□□ -0.66
LINC00839-202ENST00000429940 A8MZ25 164 aa10.94□□□□□ -0.66
LINC00839-202ENST00000429940 DEFB131AP59861 70 aa10.94□□□□□ -0.66
LINC00839-202ENST00000429940 NPC2P61916 151 aa10.94□□□□□ -0.66
LINC00839-202ENST00000429940 Q6ZSN1 163 aa10.94□□□□□ -0.66
LINC00839-202ENST00000429940 RNF183Q96D59 192 aa10.94□□□□□ -0.66
LINC00839-202ENST00000429940 CITED1Q99966 193 aa10.94□□□□□ -0.66
LINC00839-202ENST00000429940 CHCHD7Q9BUK0 85 aa10.94□□□□□ -0.66
LINC00839-202ENST00000429940 SPANXA1Q9NS26 97 aa10.94□□□□□ -0.66
LINC00839-202ENST00000429940 UBE2D4Q9Y2X8 147 aa10.94□□□□□ -0.66
LINC00839-202ENST00000429940 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
LINC00839-202ENST00000429940 TEX49A0A1B0GTD5 131 aa10.93□□□□□ -0.66
LINC00839-202ENST00000429940 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
LINC00839-202ENST00000429940 LINC01600Q96MT4 127 aa10.93□□□□□ -0.66
LINC00839-202ENST00000429940 ANAPC13Q9BS18 74 aa10.93□□□□□ -0.66
LINC00839-202ENST00000429940 RPL13AP40429 203 aaKnown RBP10.93□□□□□ -0.66
LINC00839-202ENST00000429940 LRRC75A-AS1Q8N1F1 130 aa10.92□□□□□ -0.66
LINC00839-202ENST00000429940 UBE2E2Q96LR5 201 aa10.92□□□□□ -0.66
LINC00839-202ENST00000429940 H3BMM0 161 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms