RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 DEFB104AQ8WTQ1 72 aa11.81□□□□□ -0.52
LINC00887-203ENST00000429578 URB1-AS1Q96HZ7 61 aa11.81□□□□□ -0.52
LINC00887-203ENST00000429578 GTSF1LQ9H1H1 148 aa11.81□□□□□ -0.52
LINC00887-203ENST00000429578 LINC01546A6NGU7 62 aa11.8□□□□□ -0.52
LINC00887-203ENST00000429578 TCAPO15273 167 aa11.8□□□□□ -0.52
LINC00887-203ENST00000429578 TSHBP01222 138 aa11.8□□□□□ -0.52
LINC00887-203ENST00000429578 TMEM97Q5BJF2 176 aa11.8□□□□□ -0.52
LINC00887-203ENST00000429578 FA2HQ7L5A8 372 aa11.8□□□□□ -0.52
LINC00887-203ENST00000429578 RYR2Q92736 4967 aa11.8□□□□□ -0.52
LINC00887-203ENST00000429578 FCER1GP30273 86 aa11.8□□□□□ -0.52
LINC00887-203ENST00000429578 AP5S1Q9NUS5 200 aa11.8□□□□□ -0.52
LINC00887-203ENST00000429578 TCTAP57738 103 aa11.79□□□□□ -0.52
LINC00887-203ENST00000429578 LYPD5Q6UWN5 251 aa11.79□□□□□ -0.52
LINC00887-203ENST00000429578 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
LINC00887-203ENST00000429578 APLNQ9ULZ1 77 aa11.79□□□□□ -0.52
LINC00887-203ENST00000429578 LAGE3Q14657 143 aa11.78□□□□□ -0.52
LINC00887-203ENST00000429578 RNASEKQ6P5S7 137 aaKnown RBP11.78□□□□□ -0.52
LINC00887-203ENST00000429578 CHCHD1Q96BP2 118 aaKnown RBP11.78□□□□□ -0.52
LINC00887-203ENST00000429578 TRBV6-8A0A0A6YYG3 113 aa11.77□□□□□ -0.52
LINC00887-203ENST00000429578 SERF1AO75920 110 aa11.77□□□□□ -0.52
LINC00887-203ENST00000429578 NDUFA6P56556 154 aa11.77□□□□□ -0.52
LINC00887-203ENST00000429578 TIRAPP58753 221 aa11.77□□□□□ -0.52
LINC00887-203ENST00000429578 ORMDL2Q53FV1 153 aa11.77□□□□□ -0.52
LINC00887-203ENST00000429578 COA6Q5JTJ3 125 aaKnown RBP11.77□□□□□ -0.52
LINC00887-203ENST00000429578 LCE6AA0A183 80 aa11.77□□□□□ -0.53
LINC00887-203ENST00000429578 LINC00310P59036 64 aa11.77□□□□□ -0.53
LINC00887-203ENST00000429578 TENM2Q9NT68 2774 aa11.76□□□□□ -0.53
LINC00887-203ENST00000429578 TRBV25-1A0A075B6N4 114 aa11.76□□□□□ -0.53
LINC00887-203ENST00000429578 AMTP48728 403 aa11.76□□□□□ -0.53
LINC00887-203ENST00000429578 ESRGQ1W209 222 aa11.76□□□□□ -0.53
LINC00887-203ENST00000429578 IGHV1-24A0A0C4DH33 117 aa11.75□□□□□ -0.53
LINC00887-203ENST00000429578 ESDP10768 282 aa11.75□□□□□ -0.53
LINC00887-203ENST00000429578 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
LINC00887-203ENST00000429578 LYSTQ99698 3801 aa11.75□□□□□ -0.53
LINC00887-203ENST00000429578 NUPR1O60356 82 aa11.74□□□□□ -0.53
LINC00887-203ENST00000429578 HSBP1O75506 76 aa11.74□□□□□ -0.53
LINC00887-203ENST00000429578 LELP1Q5T871 98 aa11.74□□□□□ -0.53
LINC00887-203ENST00000429578 S100A6P06703 90 aa11.74□□□□□ -0.53
LINC00887-203ENST00000429578 TMEM238LA0A1B0GVL6 79 aa11.73□□□□□ -0.53
LINC00887-203ENST00000429578 C20orf203Q8NBC4 194 aa11.73□□□□□ -0.53
LINC00887-203ENST00000429578 TMEM243Q9BU79 118 aa11.73□□□□□ -0.53
LINC00887-203ENST00000429578 G0S2P27469 103 aa11.72□□□□□ -0.53
LINC00887-203ENST00000429578 CCL18P55774 89 aa11.72□□□□□ -0.53
LINC00887-203ENST00000429578 PMCHL1Q16048 86 aa11.72□□□□□ -0.53
LINC00887-203ENST00000429578 A0A096LNJ9 63 aa11.71□□□□□ -0.54
LINC00887-203ENST00000429578 BTF3P20290 206 aaKnown RBP11.71□□□□□ -0.54
LINC00887-203ENST00000429578 C2orf66Q6UXQ4 117 aa11.71□□□□□ -0.54
LINC00887-203ENST00000429578 TMEM18Q96B42 140 aa11.71□□□□□ -0.54
LINC00887-203ENST00000429578 CHCHD5Q9BSY4 110 aa11.71□□□□□ -0.54
LINC00887-203ENST00000429578 LINC00588Q9Y4M8 146 aa11.71□□□□□ -0.54
LINC00887-203ENST00000429578 DNAH1Q9P2D7 4330 aa11.71□□□□□ -0.54
LINC00887-203ENST00000429578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.7□□□□□ -0.54
LINC00887-203ENST00000429578 TRAV8-6A0A0B4J262 113 aa11.7□□□□□ -0.54
LINC00887-203ENST00000429578 IGKV2-29A2NJV5 120 aaPredicted RBP11.7□□□□□ -0.54
LINC00887-203ENST00000429578 H7C423 109 aa11.7□□□□□ -0.54
LINC00887-203ENST00000429578 HBDP02042 147 aa11.7□□□□□ -0.54
LINC00887-203ENST00000429578 FAM19A2Q8N3H0 131 aa11.7□□□□□ -0.54
LINC00887-203ENST00000429578 CYSLTR1Q9Y271 337 aa11.7□□□□□ -0.54
LINC00887-203ENST00000429578 UBE2L6O14933 153 aa11.69□□□□□ -0.54
LINC00887-203ENST00000429578 RPL39P62891 51 aaKnown RBP11.69□□□□□ -0.54
LINC00887-203ENST00000429578 MRPS16Q9Y3D3 137 aaKnown RBP11.69□□□□□ -0.54
LINC00887-203ENST00000429578 LINC01549A6NIU2 74 aa11.69□□□□□ -0.54
LINC00887-203ENST00000429578 CTAG1AP78358 180 aa11.69□□□□□ -0.54
LINC00887-203ENST00000429578 TOMM6Q96B49 74 aa11.69□□□□□ -0.54
LINC00887-203ENST00000429578 SNRPEP62304 92 aaKnown RBP11.68□□□□□ -0.54
LINC00887-203ENST00000429578 C5orf52A6NGY3 159 aa11.67□□□□□ -0.54
LINC00887-203ENST00000429578 GAGE6Q13070 117 aa11.67□□□□□ -0.54
LINC00887-203ENST00000429578 UPK3BQ9BT76 320 aa11.67□□□□□ -0.54
LINC00887-203ENST00000429578 HYDINQ4G0P3 5121 aa11.67□□□□□ -0.54
LINC00887-203ENST00000429578 PLECQ15149 4684 aaKnown RBP11.67□□□□□ -0.54
LINC00887-203ENST00000429578 FGF6P10767 208 aa11.66□□□□□ -0.54
LINC00887-203ENST00000429578 WFDC10BQ8IUB3 73 aa11.66□□□□□ -0.54
LINC00887-203ENST00000429578 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
LINC00887-203ENST00000429578 TMEM262E9PQX1 116 aa11.66□□□□□ -0.54
LINC00887-203ENST00000429578 PKIAP61925 76 aa11.66□□□□□ -0.54
LINC00887-203ENST00000429578 SMAGPQ0VAQ4 97 aa11.66□□□□□ -0.54
LINC00887-203ENST00000429578 PDZD11Q5EBL8 140 aa11.66□□□□□ -0.54
LINC00887-203ENST00000429578 MRPL52Q86TS9 123 aaKnown RBP11.66□□□□□ -0.54
LINC00887-203ENST00000429578 ZNF25P17030 456 aaPredicted RBP11.65□□□□□ -0.54
LINC00887-203ENST00000429578 UBE2DNLQ8IWF7 75 aa11.65□□□□□ -0.54
LINC00887-203ENST00000429578 HIST3H2BBQ8N257 126 aa11.65□□□□□ -0.54
LINC00887-203ENST00000429578 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
LINC00887-203ENST00000429578 PYGO1Q9Y3Y4 419 aa11.65□□□□□ -0.54
LINC00887-203ENST00000429578 CSDC2Q9Y534 153 aaKnown RBP11.65□□□□□ -0.54
LINC00887-203ENST00000429578 A0A1B0GUV1 79 aa11.64□□□□□ -0.55
LINC00887-203ENST00000429578 IGIPA6NJ69 53 aa11.64□□□□□ -0.55
LINC00887-203ENST00000429578 MPV17L2Q567V2 206 aa11.64□□□□□ -0.55
LINC00887-203ENST00000429578 AMMECR1LQ6DCA0 310 aa11.64□□□□□ -0.55
LINC00887-203ENST00000429578 ERASQ7Z444 233 aa11.64□□□□□ -0.55
LINC00887-203ENST00000429578 SPANXA1Q9NS26 97 aa11.64□□□□□ -0.55
LINC00887-203ENST00000429578 A0A087WX48 190 aa11.63□□□□□ -0.55
LINC00887-203ENST00000429578 LEPROTL1O95214 131 aa11.63□□□□□ -0.55
LINC00887-203ENST00000429578 SCGB3A1Q96QR1 104 aa11.63□□□□□ -0.55
LINC00887-203ENST00000429578 DGAT2L7PQ6IED9 249 aa11.63□□□□□ -0.55
LINC00887-203ENST00000429578 PACRGQ96M98 296 aaPredicted RBP11.63□□□□□ -0.55
LINC00887-203ENST00000429578 TIMM17AQ99595 171 aa11.63□□□□□ -0.55
LINC00887-203ENST00000429578 SIVA1O15304 175 aa11.62□□□□□ -0.55
LINC00887-203ENST00000429578 S100A2P29034 98 aa11.62□□□□□ -0.55
LINC00887-203ENST00000429578 RBX1P62877 108 aa11.62□□□□□ -0.55
LINC00887-203ENST00000429578 Q8N976 141 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms