RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 LINC00474Q9P2X8 69 aa6.54□□□□□ -1.36
CDC42BPA-206ENST00000429440 MALRD1Q5VYJ5 2156 aa6.54□□□□□ -1.36
CDC42BPA-206ENST00000429440 IGHV3-64A0A075B6Q5 118 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 TRBV27A0A0K0K1C4 114 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 PRAC2D3DTV9 90 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 NXPH4O95158 308 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 RPL28P46779 137 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 C22orf34Q6ZV56 151 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 Q8N2B8 174 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 RNF7Q9UBF6 113 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 IGHV1-58A0A0C4DH39 117 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 MGPP08493 103 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 CIRBPQ14011 172 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 IGFL3Q6UXB1 125 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 OVOL2Q9BRP0 275 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 CACNA1AO00555 2505 aa6.53□□□□□ -1.36
CDC42BPA-206ENST00000429440 RBM3P98179 157 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-206ENST00000429440 IGFL4Q6B9Z1 124 aa6.52□□□□□ -1.37
CDC42BPA-206ENST00000429440 MUC6Q6W4X9 2439 aa6.52□□□□□ -1.37
CDC42BPA-206ENST00000429440 PIEZO2Q9H5I5 2752 aa6.52□□□□□ -1.37
CDC42BPA-206ENST00000429440 TRBV12-3P01733 135 aa6.52□□□□□ -1.37
CDC42BPA-206ENST00000429440 MRPL53Q96EL3 112 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-206ENST00000429440 CCL13Q99616 98 aa6.52□□□□□ -1.37
CDC42BPA-206ENST00000429440 LENEPQ9Y5L5 61 aa6.52□□□□□ -1.37
CDC42BPA-206ENST00000429440 A0A0J9YXV3 536 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 TRBV6-5A0A0K0K1A5 114 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 PLAC8L1A1L4L8 177 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 ADARB2-AS1A8MUL3 147 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 C9orf47Q6ZRZ4 202 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 Q96MF0 132 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 ZNF580Q9UK33 172 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 PHLDA3Q9Y5J5 127 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 SPTBN2O15020 2390 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 ACACAQ13085 2346 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 TRAV23DV6A0A075B6W5 121 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 SS18Q15532 418 aa6.51□□□□□ -1.37
CDC42BPA-206ENST00000429440 IGLV3-9A0A075B6K5 115 aa6.5□□□□□ -1.37
CDC42BPA-206ENST00000429440 CCL21O00585 134 aa6.5□□□□□ -1.37
CDC42BPA-206ENST00000429440 LINC00315P59091 139 aa6.5□□□□□ -1.37
CDC42BPA-206ENST00000429440 KIF25-AS1Q9Y6Z4 181 aa6.5□□□□□ -1.37
CDC42BPA-206ENST00000429440 ROS1P08922 2347 aa6.5□□□□□ -1.37
CDC42BPA-206ENST00000429440 PCNX1Q96RV3 2341 aa6.5□□□□□ -1.37
CDC42BPA-206ENST00000429440 HILS1P60008 231 aa6.5□□□□□ -1.37
CDC42BPA-206ENST00000429440 APC2O95996 2303 aa6.5□□□□□ -1.37
CDC42BPA-206ENST00000429440 RELNP78509 3460 aa6.5□□□□□ -1.37
CDC42BPA-206ENST00000429440 TRAV13-2A0A0B4J235 113 aa6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 BUB1B-PAK6H3BSN5 160 aa6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 S100A4P26447 101 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 C14orf132Q9NPU4 83 aa6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 CEP295Q9C0D2 2601 aa6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 IBA57-AS1B1ANH7 110 aa6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 M0R1B8 84 aa6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 SOCS3O14543 225 aa6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 RNASE4P34096 147 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 SNRPD3P62318 126 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 FAM218AQ96MZ4 157 aa6.49□□□□□ -1.37
CDC42BPA-206ENST00000429440 F8WEM9 126 aa6.48□□□□□ -1.37
CDC42BPA-206ENST00000429440 LINC00308Q8TCZ7 52 aa6.48□□□□□ -1.37
CDC42BPA-206ENST00000429440 IGLV4-3A0A075B6K6 122 aa6.48□□□□□ -1.37
CDC42BPA-206ENST00000429440 C20orf203Q8NBC4 194 aa6.48□□□□□ -1.37
CDC42BPA-206ENST00000429440 PRSS33Q8NF86 280 aa6.48□□□□□ -1.37
CDC42BPA-206ENST00000429440 OPRPNQ99935 248 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-206ENST00000429440 SPRY3O43610 288 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 PF4P02776 101 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 CCL3L1P16619 93 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 SAA4P35542 130 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 BLCAPP62952 87 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 HIST2H2BCQ6DN03 193 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 HIST2H2BDQ6DRA6 164 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 RNF5Q99942 180 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 TRAV21A0A0B4J279 112 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 F8W735 103 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 SUMO4Q6EEV6 95 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 MOB4Q9Y3A3 225 aa6.47□□□□□ -1.37
CDC42BPA-206ENST00000429440 DCHS2Q6V1P9 2916 aa6.46□□□□□ -1.37
CDC42BPA-206ENST00000429440 IGHV3-72A0A0B4J1Y9 119 aa6.46□□□□□ -1.37
CDC42BPA-206ENST00000429440 NDUFA1O15239 70 aa6.46□□□□□ -1.37
CDC42BPA-206ENST00000429440 IGHV1-46P01743 117 aa6.46□□□□□ -1.37
CDC42BPA-206ENST00000429440 LY6G5BQ8NDX9 201 aa6.46□□□□□ -1.37
CDC42BPA-206ENST00000429440 DEFB108BQ8NET1 73 aa6.46□□□□□ -1.37
CDC42BPA-206ENST00000429440 TLN1Q9Y490 2541 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-206ENST00000429440 PKDREJQ9NTG1 2253 aa6.46□□□□□ -1.38
CDC42BPA-206ENST00000429440 A8MZ25 164 aa6.46□□□□□ -1.38
CDC42BPA-206ENST00000429440 PAX4O43316 350 aa6.46□□□□□ -1.38
CDC42BPA-206ENST00000429440 Q9HAA7 133 aa6.46□□□□□ -1.38
CDC42BPA-206ENST00000429440 ARHGAP32A7KAX9 2087 aa6.46□□□□□ -1.38
CDC42BPA-206ENST00000429440 IGLV11-55A0A075B6I3 123 aa6.45□□□□□ -1.38
CDC42BPA-206ENST00000429440 C9orf129Q5T035 196 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-206ENST00000429440 VMO1Q7Z5L0 202 aa6.45□□□□□ -1.38
CDC42BPA-206ENST00000429440 ZZEF1O43149 2961 aa6.44□□□□□ -1.38
CDC42BPA-206ENST00000429440 PRR9Q5T870 116 aa6.44□□□□□ -1.38
CDC42BPA-206ENST00000429440 ENHOQ6UWT2 76 aa6.44□□□□□ -1.38
CDC42BPA-206ENST00000429440 Q8NA96 180 aa6.44□□□□□ -1.38
CDC42BPA-206ENST00000429440 RMI2Q96E14 147 aa6.44□□□□□ -1.38
CDC42BPA-206ENST00000429440 BPESC1Q9GZL8 116 aa6.44□□□□□ -1.38
CDC42BPA-206ENST00000429440 TACC2O95359 2948 aa6.44□□□□□ -1.38
CDC42BPA-206ENST00000429440 RNASE3P12724 160 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-206ENST00000429440 PTPRZ1P23471 2315 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-206ENST00000429440 POLEQ07864 2286 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms