RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.22□□□□□ -0.13
CASC4-203ENST00000429162 NOP10Q9NPE3 64 aaKnown RBP14.22□□□□□ -0.13
CASC4-203ENST00000429162 Q9UF83 564 aa14.22□□□□□ -0.13
CASC4-203ENST00000429162 IGLV4-3A0A075B6K6 122 aa14.21□□□□□ -0.13
CASC4-203ENST00000429162 A6NDN8 102 aa14.21□□□□□ -0.13
CASC4-203ENST00000429162 TAX1BP3O14907 124 aa14.21□□□□□ -0.13
CASC4-203ENST00000429162 NPSP0C0P6 89 aa14.21□□□□□ -0.13
CASC4-203ENST00000429162 MAPKAPK5-AS1Q8N8E1 139 aa14.21□□□□□ -0.13
CASC4-203ENST00000429162 ZNF479Q96JC4 524 aa14.21□□□□□ -0.13
CASC4-203ENST00000429162 PRADC1Q9BSG0 188 aa14.21□□□□□ -0.13
CASC4-203ENST00000429162 EMP1P54849 157 aa14.21□□□□□ -0.14
CASC4-203ENST00000429162 COTL1Q14019 142 aa14.21□□□□□ -0.14
CASC4-203ENST00000429162 TRBV10-1A0A0K0K1A3 114 aa14.2□□□□□ -0.14
CASC4-203ENST00000429162 PLAC8L1A1L4L8 177 aa14.2□□□□□ -0.14
CASC4-203ENST00000429162 NFE4Q86UQ8 179 aa14.2□□□□□ -0.14
CASC4-203ENST00000429162 OPRPNQ99935 248 aaPredicted RBP14.2□□□□□ -0.14
CASC4-203ENST00000429162 CITED1Q99966 193 aa14.2□□□□□ -0.14
CASC4-203ENST00000429162 MYMXA0A1B0GTQ4 84 aa14.19□□□□□ -0.14
CASC4-203ENST00000429162 K7EQD1 137 aa14.19□□□□□ -0.14
CASC4-203ENST00000429162 CRYBA4P53673 196 aa14.19□□□□□ -0.14
CASC4-203ENST00000429162 Q6ZVH6 145 aa14.19□□□□□ -0.14
CASC4-203ENST00000429162 CHCHD7Q9BUK0 85 aa14.19□□□□□ -0.14
CASC4-203ENST00000429162 VCX2Q9H322 139 aa14.19□□□□□ -0.14
CASC4-203ENST00000429162 OVOL2Q9BRP0 275 aa14.19□□□□□ -0.14
CASC4-203ENST00000429162 SPANXA1Q9NS26 97 aa14.19□□□□□ -0.14
CASC4-203ENST00000429162 CYSRT1A8MQ03 144 aa14.18□□□□□ -0.14
CASC4-203ENST00000429162 PHLDA1Q8WV24 401 aaPredicted RBP14.18□□□□□ -0.14
CASC4-203ENST00000429162 CIDEAO60543 219 aa14.17□□□□□ -0.14
CASC4-203ENST00000429162 RPL36AP83881 106 aaKnown RBP14.17□□□□□ -0.14
CASC4-203ENST00000429162 TMEM170BQ5T4T1 132 aa14.17□□□□□ -0.14
CASC4-203ENST00000429162 ZNRF2Q8NHG8 242 aa14.17□□□□□ -0.14
CASC4-203ENST00000429162 RPL36ALQ969Q0 106 aaKnown RBP14.17□□□□□ -0.14
CASC4-203ENST00000429162 FN1P02751 2386 aaKnown RBP14.17□□□□□ -0.14
CASC4-203ENST00000429162 TRBV7-3A0A075B6L6 115 aa14.17□□□□□ -0.14
CASC4-203ENST00000429162 IGHV3-38A0A0C4DH36 116 aa14.17□□□□□ -0.14
CASC4-203ENST00000429162 TAL2Q16559 108 aa14.16□□□□□ -0.14
CASC4-203ENST00000429162 TRGV2A0A075B6R0 118 aa14.15□□□□□ -0.14
CASC4-203ENST00000429162 GAGE12BA1L429 117 aa14.15□□□□□ -0.14
CASC4-203ENST00000429162 GAGE7O76087 117 aa14.15□□□□□ -0.14
CASC4-203ENST00000429162 GAGE12FP0CL80 117 aa14.15□□□□□ -0.14
CASC4-203ENST00000429162 GAGE12GP0CL81 117 aa14.15□□□□□ -0.14
CASC4-203ENST00000429162 GAGE12IP0CL82 117 aa14.15□□□□□ -0.14
CASC4-203ENST00000429162 GCSHP23434 173 aa14.15□□□□□ -0.14
CASC4-203ENST00000429162 AMELXQ99217 191 aa14.15□□□□□ -0.14
CASC4-203ENST00000429162 UBE2D4Q9Y2X8 147 aa14.15□□□□□ -0.14
CASC4-203ENST00000429162 C2CD3Q4AC94 2353 aa14.14□□□□□ -0.15
CASC4-203ENST00000429162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.14□□□□□ -0.15
CASC4-203ENST00000429162 IGKV2-29A2NJV5 120 aaPredicted RBP14.14□□□□□ -0.15
CASC4-203ENST00000429162 ZNF815PA8K554 130 aa14.14□□□□□ -0.15
CASC4-203ENST00000429162 SPATA3Q8NHX4 192 aa14.14□□□□□ -0.15
CASC4-203ENST00000429162 NIPBLQ6KC79 2804 aaeCLIP14.14□□□□□ -0.157e-6■□□□□ 10.5
CASC4-203ENST00000429162 HIVEP1P15822 2718 aa14.13□□□□□ -0.15
CASC4-203ENST00000429162 H3BRM9 83 aa14.13□□□□□ -0.15
CASC4-203ENST00000429162 DAZ4Q86SG3 579 aaKnown RBP14.13□□□□□ -0.15
CASC4-203ENST00000429162 DAZ3Q9NR90 486 aaKnown RBP14.13□□□□□ -0.15
CASC4-203ENST00000429162 CEND1Q8N111 149 aa14.13□□□□□ -0.15
CASC4-203ENST00000429162 SLC25A29Q8N8R3 303 aa14.13□□□□□ -0.15
CASC4-203ENST00000429162 TM2D2Q9BX73 214 aa14.13□□□□□ -0.15
CASC4-203ENST00000429162 FAM104AQ969W3 186 aa14.12□□□□□ -0.15
CASC4-203ENST00000429162 A0A0J9YXV3 536 aa14.11□□□□□ -0.15
CASC4-203ENST00000429162 ZNF22P17026 224 aaPredicted RBP14.11□□□□□ -0.15
CASC4-203ENST00000429162 FXYD2P54710 66 aa14.11□□□□□ -0.15
CASC4-203ENST00000429162 UBE2D3P61077 147 aa14.11□□□□□ -0.15
CASC4-203ENST00000429162 UBE2D2P62837 147 aa14.11□□□□□ -0.15
CASC4-203ENST00000429162 CEMP1Q6PRD7 247 aaPredicted RBP14.11□□□□□ -0.15
CASC4-203ENST00000429162 HIST1H4GQ99525 98 aa14.11□□□□□ -0.15
CASC4-203ENST00000429162 TIMM21Q9BVV7 248 aa14.11□□□□□ -0.15
CASC4-203ENST00000429162 JMJD1CQ15652 2540 aa14.1□□□□□ -0.15
CASC4-203ENST00000429162 TMEM223A0PJW6 202 aa14.1□□□□□ -0.15
CASC4-203ENST00000429162 PTTG1IPP53801 180 aa14.1□□□□□ -0.15
CASC4-203ENST00000429162 VAMP3Q15836 100 aa14.1□□□□□ -0.15
CASC4-203ENST00000429162 TRBV6-4A0A1B0GX49 114 aa14.09□□□□□ -0.15
CASC4-203ENST00000429162 GAGE12JA6NER3 117 aa14.09□□□□□ -0.15
CASC4-203ENST00000429162 MRPS36P82909 103 aaKnown RBP14.09□□□□□ -0.15
CASC4-203ENST00000429162 GAGE4Q13068 117 aa14.09□□□□□ -0.15
CASC4-203ENST00000429162 GAGE5Q13069 117 aa14.09□□□□□ -0.15
CASC4-203ENST00000429162 GAGE13Q4V321 117 aa14.09□□□□□ -0.15
CASC4-203ENST00000429162 SCGB1D4Q6XE38 83 aa14.09□□□□□ -0.15
CASC4-203ENST00000429162 Q6ZUT4 128 aa14.09□□□□□ -0.15
CASC4-203ENST00000429162 TRGV4A0A0C4DH28 118 aa14.08□□□□□ -0.16
CASC4-203ENST00000429162 UBE2V1Q13404 147 aa14.08□□□□□ -0.16
CASC4-203ENST00000429162 SMIM9A6NGZ8 99 aa14.07□□□□□ -0.16
CASC4-203ENST00000429162 J3QQQ9 107 aa14.07□□□□□ -0.16
CASC4-203ENST00000429162 LEPROTO15243 131 aa14.07□□□□□ -0.16
CASC4-203ENST00000429162 SMIM13P0DJ93 91 aa14.07□□□□□ -0.16
CASC4-203ENST00000429162 LGALS3P17931 250 aaKnown RBP14.07□□□□□ -0.16
CASC4-203ENST00000429162 C9orf118A6NHY6 69 aa14.07□□□□□ -0.16
CASC4-203ENST00000429162 TSPEAR-AS2P59090 65 aa14.07□□□□□ -0.16
CASC4-203ENST00000429162 SMAGPQ0VAQ4 97 aa14.07□□□□□ -0.16
CASC4-203ENST00000429162 DGAT2L7PQ6IED9 249 aa14.07□□□□□ -0.16
CASC4-203ENST00000429162 KIR2DL5BQ8NHK3 375 aa14.07□□□□□ -0.16
CASC4-203ENST00000429162 RNASE13Q5GAN3 156 aaKnown RBP14.06□□□□□ -0.16
CASC4-203ENST00000429162 TINCRA0A1B0GVN0 87 aa14.05□□□□□ -0.16
CASC4-203ENST00000429162 WFDC9Q8NEX5 89 aa14.05□□□□□ -0.16
CASC4-203ENST00000429162 PLEKHB2Q96CS7 222 aa14.05□□□□□ -0.16
CASC4-203ENST00000429162 X6R8D5 127 aa14.05□□□□□ -0.16
CASC4-203ENST00000429162 K7EP13 123 aa14.05□□□□□ -0.16
CASC4-203ENST00000429162 APOC4P55056 127 aa14.05□□□□□ -0.16
CASC4-203ENST00000429162 LINC00612Q8N6U2 182 aa14.05□□□□□ -0.16
CASC4-203ENST00000429162 GTSF1LQ9H1H1 148 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms