RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
CECR3-201ENST00000428828 IGHV3-30P01768 117 aa8.54□□□□□ -1.04
CECR3-201ENST00000428828 IGHV3-30-5P0DP03 117 aa8.54□□□□□ -1.04
CECR3-201ENST00000428828 ORMDL2Q53FV1 153 aa8.54□□□□□ -1.04
CECR3-201ENST00000428828 ZNF575Q86XF7 245 aa8.54□□□□□ -1.04
CECR3-201ENST00000428828 NRACQ8N912 160 aa8.54□□□□□ -1.04
CECR3-201ENST00000428828 NTN5Q8WTR8 489 aaPredicted RBP8.54□□□□□ -1.04
CECR3-201ENST00000428828 UQCRQO14949 82 aa8.53□□□□□ -1.04
CECR3-201ENST00000428828 CTSGP08311 255 aa8.53□□□□□ -1.04
CECR3-201ENST00000428828 LYZP61626 148 aa8.53□□□□□ -1.04
CECR3-201ENST00000428828 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
CECR3-201ENST00000428828 SLC25A29Q8N8R3 303 aa8.53□□□□□ -1.04
CECR3-201ENST00000428828 OR13C6PQ8NH95 151 aa8.53□□□□□ -1.04
CECR3-201ENST00000428828 TOMM6Q96B49 74 aa8.53□□□□□ -1.04
CECR3-201ENST00000428828 TMEM101Q96IK0 257 aa8.53□□□□□ -1.04
CECR3-201ENST00000428828 ADARB2-AS1A8MUL3 147 aa8.52□□□□□ -1.04
CECR3-201ENST00000428828 IGKV1-17P01599 117 aa8.52□□□□□ -1.04
CECR3-201ENST00000428828 SLURP1P55000 103 aa8.52□□□□□ -1.04
CECR3-201ENST00000428828 LINC01620Q4KN68 170 aa8.52□□□□□ -1.04
CECR3-201ENST00000428828 LINC00526Q96FQ7 95 aa8.52□□□□□ -1.04
CECR3-201ENST00000428828 H3BMM0 161 aa8.52□□□□□ -1.05
CECR3-201ENST00000428828 H3BT86 120 aa8.52□□□□□ -1.05
CECR3-201ENST00000428828 LINC00694P0DN24 101 aa8.52□□□□□ -1.05
CECR3-201ENST00000428828 HERVK_113P61574 105 aa8.52□□□□□ -1.05
CECR3-201ENST00000428828 UBE2WQ96B02 151 aa8.52□□□□□ -1.05
CECR3-201ENST00000428828 MDFIQ99750 246 aa8.52□□□□□ -1.05
CECR3-201ENST00000428828 IGHV4-4A0A075B6R2 117 aa8.51□□□□□ -1.05
CECR3-201ENST00000428828 IGHV3-33P01772 117 aa8.51□□□□□ -1.05
CECR3-201ENST00000428828 ACYP1P07311 99 aa8.51□□□□□ -1.05
CECR3-201ENST00000428828 PLEKHB2Q96CS7 222 aa8.51□□□□□ -1.05
CECR3-201ENST00000428828 GAS8-AS1O95177 125 aa8.5□□□□□ -1.05
CECR3-201ENST00000428828 HOXD3P31249 432 aaPredicted RBP8.5□□□□□ -1.05
CECR3-201ENST00000428828 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
CECR3-201ENST00000428828 POM121L12Q8N7R1 296 aa8.5□□□□□ -1.05
CECR3-201ENST00000428828 ASCL2Q99929 193 aa8.5□□□□□ -1.05
CECR3-201ENST00000428828 VWFP04275 2813 aa8.5□□□□□ -1.05
CECR3-201ENST00000428828 CCL24O00175 119 aa8.5□□□□□ -1.05
CECR3-201ENST00000428828 ERCC8Q13216 396 aa8.5□□□□□ -1.05
CECR3-201ENST00000428828 UNQ9165/PRO28630Q6UXU0 137 aa8.5□□□□□ -1.05
CECR3-201ENST00000428828 ZNRF2Q8NHG8 242 aa8.5□□□□□ -1.05
CECR3-201ENST00000428828 SCGB3A1Q96QR1 104 aa8.5□□□□□ -1.05
CECR3-201ENST00000428828 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
CECR3-201ENST00000428828 PF4P02776 101 aa8.49□□□□□ -1.05
CECR3-201ENST00000428828 SYNJ2BPP57105 145 aa8.49□□□□□ -1.05
CECR3-201ENST00000428828 SFTA2Q6UW10 78 aa8.49□□□□□ -1.05
CECR3-201ENST00000428828 FAM19A5Q7Z5A7 132 aaPredicted RBP8.49□□□□□ -1.05
CECR3-201ENST00000428828 C17orf77Q96MU5 243 aa8.49□□□□□ -1.05
CECR3-201ENST00000428828 CHCHD5Q9BSY4 110 aa8.49□□□□□ -1.05
CECR3-201ENST00000428828 SMIM2Q9BVW6 85 aa8.49□□□□□ -1.05
CECR3-201ENST00000428828 MSRB1Q9NZV6 116 aa8.49□□□□□ -1.05
CECR3-201ENST00000428828 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.48□□□□□ -1.05
CECR3-201ENST00000428828 M0R3E3 92 aa8.48□□□□□ -1.05
CECR3-201ENST00000428828 C9orf153Q5TBE3 101 aa8.48□□□□□ -1.05
CECR3-201ENST00000428828 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
CECR3-201ENST00000428828 IGHV3-49A0A0A0MS15 119 aa8.48□□□□□ -1.05
CECR3-201ENST00000428828 NDUFA4O00483 81 aa8.48□□□□□ -1.05
CECR3-201ENST00000428828 EDN2P20800 178 aa8.48□□□□□ -1.05
CECR3-201ENST00000428828 RNF125Q96EQ8 232 aa8.48□□□□□ -1.05
CECR3-201ENST00000428828 ZFAND3Q9H8U3 227 aa8.48□□□□□ -1.05
CECR3-201ENST00000428828 IGHV3OR16-13A0A075B7E8 117 aa8.47□□□□□ -1.05
CECR3-201ENST00000428828 IGHV3-74A0A0B4J1X5 117 aa8.47□□□□□ -1.05
CECR3-201ENST00000428828 GATA1P15976 413 aaPredicted RBP8.47□□□□□ -1.05
CECR3-201ENST00000428828 SLC50A1Q9BRV3 221 aa8.47□□□□□ -1.05
CECR3-201ENST00000428828 AGRNO00468 2067 aa8.47□□□□□ -1.05
CECR3-201ENST00000428828 TEX49A0A1B0GTD5 131 aa8.46□□□□□ -1.05
CECR3-201ENST00000428828 CRYGAP11844 174 aa8.46□□□□□ -1.05
CECR3-201ENST00000428828 RPL7P18124 248 aaKnown RBP8.46□□□□□ -1.05
CECR3-201ENST00000428828 ZNF80P51504 273 aaPredicted RBP8.46□□□□□ -1.05
CECR3-201ENST00000428828 HERVK_113P63121 156 aa8.46□□□□□ -1.05
CECR3-201ENST00000428828 GPHB5Q86YW7 130 aa8.46□□□□□ -1.05
CECR3-201ENST00000428828 IGHV3-66A0A0C4DH42 116 aa8.46□□□□□ -1.06
CECR3-201ENST00000428828 TRPT1Q86TN4 253 aaKnown RBP8.46□□□□□ -1.06
CECR3-201ENST00000428828 C11orf86A6NJI1 115 aa8.45□□□□□ -1.06
CECR3-201ENST00000428828 ORM1P02763 201 aa8.45□□□□□ -1.06
CECR3-201ENST00000428828 CXCL5P42830 114 aa8.45□□□□□ -1.06
CECR3-201ENST00000428828 RBAKDNA6NC62 111 aa8.44□□□□□ -1.06
CECR3-201ENST00000428828 OVOL1O14753 267 aa8.44□□□□□ -1.06
CECR3-201ENST00000428828 ZNF56Q15929 161 aa8.44□□□□□ -1.06
CECR3-201ENST00000428828 MRAPQ8TCY5 172 aa8.44□□□□□ -1.06
CECR3-201ENST00000428828 METTL26Q96S19 204 aa8.44□□□□□ -1.06
CECR3-201ENST00000428828 DAZ1Q9NQZ3 744 aaKnown RBP8.44□□□□□ -1.06
CECR3-201ENST00000428828 M0R381 172 aa8.44□□□□□ -1.06
CECR3-201ENST00000428828 C2orf82Q6UX34 121 aa8.44□□□□□ -1.06
CECR3-201ENST00000428828 SPATA3Q8NHX4 192 aa8.44□□□□□ -1.06
CECR3-201ENST00000428828 AMELXQ99217 191 aa8.44□□□□□ -1.06
CECR3-201ENST00000428828 IGKV2-40A0A087WW87 121 aaPredicted RBP8.43□□□□□ -1.06
CECR3-201ENST00000428828 A0A0J9YX75 114 aa8.43□□□□□ -1.06
CECR3-201ENST00000428828 FAM236AA0A1B0GUQ0 79 aa8.43□□□□□ -1.06
CECR3-201ENST00000428828 FAM236BA0A1B0GV22 79 aa8.43□□□□□ -1.06
CECR3-201ENST00000428828 PPP1R17O96001 155 aa8.43□□□□□ -1.06
CECR3-201ENST00000428828 IGKV2D-40P01614 121 aaPredicted RBP8.43□□□□□ -1.06
CECR3-201ENST00000428828 COX7CP15954 63 aa8.43□□□□□ -1.06
CECR3-201ENST00000428828 SDIM1Q6ZPB5 146 aa8.43□□□□□ -1.06
CECR3-201ENST00000428828 LINC00643Q86TS7 51 aa8.43□□□□□ -1.06
CECR3-201ENST00000428828 LINC00482Q8N8I6 264 aa8.43□□□□□ -1.06
CECR3-201ENST00000428828 PEMTQ9UBM1 199 aa8.43□□□□□ -1.06
CECR3-201ENST00000428828 TRRAPQ9Y4A5 3859 aa8.43□□□□□ -1.06
CECR3-201ENST00000428828 TRGV11A0A075B6L2 103 aa8.42□□□□□ -1.06
CECR3-201ENST00000428828 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
CECR3-201ENST00000428828 A4D1N5 150 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms