RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TRAV26-2A0A0B4J265 109 aa9.9□□□□□ -0.82
SEC13-210ENST00000428626 K7EN84 100 aa9.9□□□□□ -0.82
SEC13-210ENST00000428626 TRGC1P0CF51 173 aa9.9□□□□□ -0.82
SEC13-210ENST00000428626 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
SEC13-210ENST00000428626 CLRN3Q8NCR9 226 aa9.9□□□□□ -0.82
SEC13-210ENST00000428626 CNFNQ9BYD5 112 aa9.9□□□□□ -0.82
SEC13-210ENST00000428626 TRAV8-4A0A0B4J246 113 aa9.89□□□□□ -0.83
SEC13-210ENST00000428626 hDV102S1A0JD36 115 aa9.89□□□□□ -0.83
SEC13-210ENST00000428626 CHTF8P0CG12 524 aa9.89□□□□□ -0.83
SEC13-210ENST00000428626 GATD1Q8NB37 220 aa9.89□□□□□ -0.83
SEC13-210ENST00000428626 RNASE7Q9H1E1 156 aaKnown RBP9.89□□□□□ -0.83
SEC13-210ENST00000428626 XKRY2A2RUG3 117 aa9.88□□□□□ -0.83
SEC13-210ENST00000428626 FOXA3P55318 350 aaPredicted RBP9.88□□□□□ -0.83
SEC13-210ENST00000428626 EIF5AL1Q6IS14 154 aaKnown RBP9.88□□□□□ -0.83
SEC13-210ENST00000428626 WDR73Q6P4I2 378 aa9.88□□□□□ -0.83
SEC13-210ENST00000428626 C15orf56Q8N910 161 aa9.88□□□□□ -0.83
SEC13-210ENST00000428626 UBR4Q5T4S7 5183 aa9.88□□□□□ -0.83
SEC13-210ENST00000428626 TEX46H3BTG2 121 aa9.87□□□□□ -0.83
SEC13-210ENST00000428626 AMTP48728 403 aa9.87□□□□□ -0.83
SEC13-210ENST00000428626 SERTAD4-AS1Q5TG53 156 aa9.87□□□□□ -0.83
SEC13-210ENST00000428626 Q6ZNX1 250 aa9.87□□□□□ -0.83
SEC13-210ENST00000428626 OCC1Q8TAD7 63 aa9.87□□□□□ -0.83
SEC13-210ENST00000428626 GTSF1Q8WW33 167 aa9.87□□□□□ -0.83
SEC13-210ENST00000428626 RPL39LQ96EH5 51 aaKnown RBP9.87□□□□□ -0.83
SEC13-210ENST00000428626 MT1HL1P0DM35 61 aa9.86□□□□□ -0.83
SEC13-210ENST00000428626 COTL1Q14019 142 aa9.86□□□□□ -0.83
SEC13-210ENST00000428626 TWIST1Q15672 202 aa9.86□□□□□ -0.83
SEC13-210ENST00000428626 TCTE3Q8IZS6 198 aa9.86□□□□□ -0.83
SEC13-210ENST00000428626 RPP21Q9H633 154 aaKnown RBP9.86□□□□□ -0.83
SEC13-210ENST00000428626 A0A087WYN8 130 aa9.85□□□□□ -0.83
SEC13-210ENST00000428626 SLC51BQ86UW2 128 aa9.85□□□□□ -0.83
SEC13-210ENST00000428626 BIN3Q9NQY0 253 aa9.85□□□□□ -0.83
SEC13-210ENST00000428626 IGHV3-64A0A075B6Q5 118 aa9.84□□□□□ -0.83
SEC13-210ENST00000428626 IGKV3OR2-268A0A0C4DH90 116 aa9.84□□□□□ -0.83
SEC13-210ENST00000428626 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
SEC13-210ENST00000428626 UBE2L6O14933 153 aa9.84□□□□□ -0.83
SEC13-210ENST00000428626 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
SEC13-210ENST00000428626 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.83□□□□□ -0.84
SEC13-210ENST00000428626 IGKV2-29A2NJV5 120 aaPredicted RBP9.83□□□□□ -0.84
SEC13-210ENST00000428626 GAS8-AS1O95177 125 aa9.83□□□□□ -0.84
SEC13-210ENST00000428626 HIGD2BQ4VC39 106 aa9.82□□□□□ -0.84
SEC13-210ENST00000428626 AP5S1Q9NUS5 200 aa9.82□□□□□ -0.84
SEC13-210ENST00000428626 FAM231BA6NCW3 169 aa9.81□□□□□ -0.84
SEC13-210ENST00000428626 CHCHD10Q8WYQ3 142 aaPredicted RBP9.81□□□□□ -0.84
SEC13-210ENST00000428626 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.8□□□□□ -0.84
SEC13-210ENST00000428626 TAGLN2P37802 199 aaKnown RBP9.8□□□□□ -0.84
SEC13-210ENST00000428626 COX6A2Q02221 97 aa9.8□□□□□ -0.84
SEC13-210ENST00000428626 PRSS3P2Q8NHM4 247 aa9.8□□□□□ -0.84
SEC13-210ENST00000428626 PLAC8Q9NZF1 115 aa9.8□□□□□ -0.84
SEC13-210ENST00000428626 PLA2G2DQ9UNK4 145 aa9.8□□□□□ -0.84
SEC13-210ENST00000428626 TNXBP22105 4242 aa9.8□□□□□ -0.84
SEC13-210ENST00000428626 SDHAF1A6NFY7 115 aa9.79□□□□□ -0.84
SEC13-210ENST00000428626 FGF6P10767 208 aa9.79□□□□□ -0.84
SEC13-210ENST00000428626 RNF185Q96GF1 192 aa9.79□□□□□ -0.84
SEC13-210ENST00000428626 PHOX2AO14813 284 aa9.78□□□□□ -0.84
SEC13-210ENST00000428626 GATCO43716 136 aaKnown RBP9.78□□□□□ -0.84
SEC13-210ENST00000428626 NCR2O95944 276 aa9.78□□□□□ -0.84
SEC13-210ENST00000428626 APCSP02743 223 aa9.78□□□□□ -0.84
SEC13-210ENST00000428626 FOXI1Q12951 378 aa9.78□□□□□ -0.84
SEC13-210ENST00000428626 AMMECR1LQ6DCA0 310 aa9.78□□□□□ -0.84
SEC13-210ENST00000428626 RNASEKQ6P5S7 137 aaKnown RBP9.78□□□□□ -0.84
SEC13-210ENST00000428626 ALKAL2Q6UX46 152 aa9.78□□□□□ -0.84
SEC13-210ENST00000428626 Q6ZRU5 148 aa9.78□□□□□ -0.84
SEC13-210ENST00000428626 FAM231DQ6ZW35 169 aa9.78□□□□□ -0.84
SEC13-210ENST00000428626 DPH3Q96FX2 82 aa9.78□□□□□ -0.84
SEC13-210ENST00000428626 TMEM250H0YL14 139 aa9.77□□□□□ -0.85
SEC13-210ENST00000428626 RPS10P46783 165 aaKnown RBP9.77□□□□□ -0.85
SEC13-210ENST00000428626 LYPD6BQ8NI32 183 aa9.77□□□□□ -0.85
SEC13-210ENST00000428626 GVQW2A0A096LPI5 108 aaPredicted RBP9.76□□□□□ -0.85
SEC13-210ENST00000428626 TRBV6-5A0A0K0K1A5 114 aa9.76□□□□□ -0.85
SEC13-210ENST00000428626 H7C423 109 aa9.76□□□□□ -0.85
SEC13-210ENST00000428626 TSHBP01222 138 aa9.76□□□□□ -0.85
SEC13-210ENST00000428626 ESDP10768 282 aa9.76□□□□□ -0.85
SEC13-210ENST00000428626 CFAP161Q6P656 301 aa9.76□□□□□ -0.85
SEC13-210ENST00000428626 LINC00526Q96FQ7 95 aa9.76□□□□□ -0.85
SEC13-210ENST00000428626 IGKV2-24A0A0C4DH68 120 aa9.75□□□□□ -0.85
SEC13-210ENST00000428626 A8MWL6 223 aa9.75□□□□□ -0.85
SEC13-210ENST00000428626 TMEM242Q9NWH2 141 aa9.75□□□□□ -0.85
SEC13-210ENST00000428626 A0A096LNI7 61 aa9.74□□□□□ -0.85
SEC13-210ENST00000428626 I3L3M4 83 aa9.74□□□□□ -0.85
SEC13-210ENST00000428626 NDUFS6O75380 124 aaKnown RBP9.74□□□□□ -0.85
SEC13-210ENST00000428626 PMCHP20382 165 aa9.74□□□□□ -0.85
SEC13-210ENST00000428626 XCL1P47992 114 aa9.74□□□□□ -0.85
SEC13-210ENST00000428626 CEBPGP53567 150 aa9.74□□□□□ -0.85
SEC13-210ENST00000428626 MAJINQ3KP22 176 aa9.74□□□□□ -0.85
SEC13-210ENST00000428626 TEX261Q6UWH6 196 aa9.74□□□□□ -0.85
SEC13-210ENST00000428626 SMIM15Q7Z3B0 74 aa9.74□□□□□ -0.85
SEC13-210ENST00000428626 OR5A1Q8NGJ0 315 aa9.74□□□□□ -0.85
SEC13-210ENST00000428626 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
SEC13-210ENST00000428626 POLR2KP53803 58 aaKnown RBP9.73□□□□□ -0.85
SEC13-210ENST00000428626 BLOC1S1P78537 153 aa9.73□□□□□ -0.85
SEC13-210ENST00000428626 CT83Q5H943 113 aa9.73□□□□□ -0.85
SEC13-210ENST00000428626 CCL25O15444 150 aa9.72□□□□□ -0.85
SEC13-210ENST00000428626 ZNF25P17030 456 aaPredicted RBP9.72□□□□□ -0.85
SEC13-210ENST00000428626 LINC01551Q86U37 167 aa9.72□□□□□ -0.85
SEC13-210ENST00000428626 STPG4Q8N801 248 aa9.72□□□□□ -0.85
SEC13-210ENST00000428626 HIGD1CA8MV81 97 aa9.71□□□□□ -0.86
SEC13-210ENST00000428626 RAB4AP20338 218 aa9.71□□□□□ -0.86
SEC13-210ENST00000428626 ODF1Q14990 250 aa9.71□□□□□ -0.86
SEC13-210ENST00000428626 TSKUQ8WUA8 353 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms