RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 GATCO43716 136 aaKnown RBP6.24□□□□□ -1.41
TRIM39-208ENST00000428555 SMR3BP02814 79 aaPredicted RBP6.24□□□□□ -1.41
TRIM39-208ENST00000428555 ANGP03950 147 aaKnown RBP6.24□□□□□ -1.41
TRIM39-208ENST00000428555 CTRLP40313 264 aa6.24□□□□□ -1.41
TRIM39-208ENST00000428555 FOXA3P55318 350 aaPredicted RBP6.24□□□□□ -1.41
TRIM39-208ENST00000428555 HAMPP81172 84 aa6.24□□□□□ -1.41
TRIM39-208ENST00000428555 Q0VG73 95 aa6.24□□□□□ -1.41
TRIM39-208ENST00000428555 TMEM97Q5BJF2 176 aa6.24□□□□□ -1.41
TRIM39-208ENST00000428555 RASL11AQ6T310 242 aa6.24□□□□□ -1.41
TRIM39-208ENST00000428555 DPH3P1Q9H4G8 78 aa6.24□□□□□ -1.41
TRIM39-208ENST00000428555 NIT2Q9NQR4 276 aa6.24□□□□□ -1.41
TRIM39-208ENST00000428555 FAM30AQ9NZY2 134 aa6.24□□□□□ -1.41
TRIM39-208ENST00000428555 TRBV25-1A0A075B6N4 114 aa6.23□□□□□ -1.41
TRIM39-208ENST00000428555 EPM2AB3EWF7 344 aa6.23□□□□□ -1.41
TRIM39-208ENST00000428555 RBX1P62877 108 aa6.23□□□□□ -1.41
TRIM39-208ENST00000428555 IQCJQ1A5X6 159 aa6.23□□□□□ -1.41
TRIM39-208ENST00000428555 DGAT2L7PQ6IED9 249 aa6.23□□□□□ -1.41
TRIM39-208ENST00000428555 PGLYRP4Q96LB8 373 aa6.23□□□□□ -1.41
TRIM39-208ENST00000428555 CNFNQ9BYD5 112 aa6.23□□□□□ -1.41
TRIM39-208ENST00000428555 TRAV26-2A0A0B4J265 109 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 IGHV1-24A0A0C4DH33 117 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 A8MWL6 223 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 SRP19P09132 144 aaKnown RBP6.22□□□□□ -1.41
TRIM39-208ENST00000428555 PKIAP61925 76 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 LINC01620Q4KN68 170 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 FAM231DQ6ZW35 169 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 LINC00528Q8N1L1 170 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 LINC00269Q8N2A0 174 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 GATD1Q8NB37 220 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 SMIM7Q9BQ49 75 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 TMEM70Q9BUB7 260 aa6.22□□□□□ -1.41
TRIM39-208ENST00000428555 ZNF727A8MUV8 499 aa6.21□□□□□ -1.42
TRIM39-208ENST00000428555 CRPP02741 224 aa6.21□□□□□ -1.42
TRIM39-208ENST00000428555 MALP21145 153 aa6.21□□□□□ -1.42
TRIM39-208ENST00000428555 CLPSL2Q6UWE3 100 aa6.21□□□□□ -1.42
TRIM39-208ENST00000428555 LINC01551Q86U37 167 aa6.21□□□□□ -1.42
TRIM39-208ENST00000428555 VPS13BQ7Z7G8 4022 aa6.21□□□□□ -1.42
TRIM39-208ENST00000428555 NDUFS6O75380 124 aaKnown RBP6.2□□□□□ -1.42
TRIM39-208ENST00000428555 MIAQ16674 131 aa6.2□□□□□ -1.42
TRIM39-208ENST00000428555 NDUFA5Q16718 116 aa6.2□□□□□ -1.42
TRIM39-208ENST00000428555 SMIM15Q7Z3B0 74 aa6.2□□□□□ -1.42
TRIM39-208ENST00000428555 TMEM243Q9BU79 118 aa6.2□□□□□ -1.42
TRIM39-208ENST00000428555 PRR34Q9NV39 138 aa6.2□□□□□ -1.42
TRIM39-208ENST00000428555 IGLV4-60A0A075B6I1 120 aa6.19□□□□□ -1.42
TRIM39-208ENST00000428555 C9JQL5 133 aa6.19□□□□□ -1.42
TRIM39-208ENST00000428555 TMEM241Q24JQ0 296 aa6.19□□□□□ -1.42
TRIM39-208ENST00000428555 Q5VSD8 79 aa6.19□□□□□ -1.42
TRIM39-208ENST00000428555 KRTAP26-1Q6PEX3 210 aa6.19□□□□□ -1.42
TRIM39-208ENST00000428555 C20orf203Q8NBC4 194 aa6.19□□□□□ -1.42
TRIM39-208ENST00000428555 FRZBQ92765 325 aa6.19□□□□□ -1.42
TRIM39-208ENST00000428555 RPL39LQ96EH5 51 aaKnown RBP6.19□□□□□ -1.42
TRIM39-208ENST00000428555 OSTCQ9NRP0 149 aa6.19□□□□□ -1.42
TRIM39-208ENST00000428555 HERC1Q15751 4861 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 IGLV10-54A0A075B6I4 117 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 A0A1B0GUV1 79 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 HIGD1CA8MV81 97 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 USP17L23D6RBM5 183 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 FAM229AH3BQW9 127 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 HLA-DQA1P01909 254 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 RAB4AP20338 218 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 AMTP48728 403 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 SRSF3P84103 164 aaKnown RBP6.18□□□□□ -1.42
TRIM39-208ENST00000428555 TEX261Q6UWH6 196 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 TSKUQ8WUA8 353 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 GFRA4Q9GZZ7 299 aa6.18□□□□□ -1.42
TRIM39-208ENST00000428555 A0A1B0GUT8 65 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 UBE2L6O14933 153 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 GAS8-AS1O95177 125 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 SNAPINO95295 136 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 PRSS1P07477 247 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 REG3AQ06141 175 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 C14orf177Q52M58 125 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 Q6ZSA8 131 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 BORCS7Q96B45 105 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 ALKBH7Q9BT30 221 aaPredicted RBP6.17□□□□□ -1.42
TRIM39-208ENST00000428555 CDIP1Q9H305 208 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 V9GYV3 84 aa6.17□□□□□ -1.42
TRIM39-208ENST00000428555 FAM231BA6NCW3 169 aa6.16□□□□□ -1.42
TRIM39-208ENST00000428555 SDHAF1A6NFY7 115 aa6.16□□□□□ -1.42
TRIM39-208ENST00000428555 C5orf52A6NGY3 159 aa6.16□□□□□ -1.42
TRIM39-208ENST00000428555 RPL23P62829 140 aaKnown RBP6.16□□□□□ -1.42
TRIM39-208ENST00000428555 PEA15Q15121 130 aa6.16□□□□□ -1.42
TRIM39-208ENST00000428555 FAM74A3Q4VXF1 159 aa6.16□□□□□ -1.42
TRIM39-208ENST00000428555 NUP35Q8NFH5 326 aa6.16□□□□□ -1.42
TRIM39-208ENST00000428555 ISOC2Q96AB3 205 aa6.16□□□□□ -1.42
TRIM39-208ENST00000428555 TMEM191AQ9H0A3 160 aa6.16□□□□□ -1.42
TRIM39-208ENST00000428555 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
TRIM39-208ENST00000428555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.15□□□□□ -1.42
TRIM39-208ENST00000428555 TRAV8-4A0A0B4J246 113 aa6.15□□□□□ -1.42
TRIM39-208ENST00000428555 IGKV2-29A2NJV5 120 aaPredicted RBP6.15□□□□□ -1.42
TRIM39-208ENST00000428555 PMCHP20382 165 aa6.15□□□□□ -1.42
TRIM39-208ENST00000428555 ADIRFQ15847 76 aa6.15□□□□□ -1.42
TRIM39-208ENST00000428555 RNF185Q96GF1 192 aa6.15□□□□□ -1.42
TRIM39-208ENST00000428555 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
TRIM39-208ENST00000428555 IGKV3OR2-268A0A0C4DH90 116 aa6.14□□□□□ -1.43
TRIM39-208ENST00000428555 TRBV6-5A0A0K0K1A5 114 aa6.14□□□□□ -1.43
TRIM39-208ENST00000428555 I3L3M4 83 aa6.14□□□□□ -1.43
TRIM39-208ENST00000428555 NCR2O95944 276 aa6.14□□□□□ -1.43
TRIM39-208ENST00000428555 CAMPP49913 170 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms