RNA–Protein interactions for RNA: ENST00000428394.6

HCLS1-202, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2 BASIC

Gene HCLS1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-202ENST00000428394 SPINK8P0C7L1 97 aa12.37□□□□□ -0.43
HCLS1-202ENST00000428394 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
HCLS1-202ENST00000428394 RPL13AP40429 203 aaKnown RBP12.37□□□□□ -0.43
HCLS1-202ENST00000428394 MUSTN1Q8IVN3 82 aa12.37□□□□□ -0.43
HCLS1-202ENST00000428394 MED13LQ71F56 2210 aa12.37□□□□□ -0.43
HCLS1-202ENST00000428394 EDN2P20800 178 aa12.36□□□□□ -0.43
HCLS1-202ENST00000428394 DEFB112Q30KQ8 113 aa12.36□□□□□ -0.43
HCLS1-202ENST00000428394 HIST2H2BCQ6DN03 193 aa12.36□□□□□ -0.43
HCLS1-202ENST00000428394 IGHV4-59P01825 116 aa12.35□□□□□ -0.43
HCLS1-202ENST00000428394 LITAFQ99732 161 aa12.35□□□□□ -0.43
HCLS1-202ENST00000428394 AVPP01185 164 aa12.35□□□□□ -0.43
HCLS1-202ENST00000428394 COX6CP09669 75 aa12.35□□□□□ -0.43
HCLS1-202ENST00000428394 HOXD3P31249 432 aaPredicted RBP12.35□□□□□ -0.43
HCLS1-202ENST00000428394 SYNJ2BPP57105 145 aa12.35□□□□□ -0.43
HCLS1-202ENST00000428394 MIAQ16674 131 aa12.35□□□□□ -0.43
HCLS1-202ENST00000428394 COPS9Q8WXC6 57 aa12.35□□□□□ -0.43
HCLS1-202ENST00000428394 PPDPFQ9H3Y8 114 aa12.35□□□□□ -0.43
HCLS1-202ENST00000428394 H3BT86 120 aa12.34□□□□□ -0.43
HCLS1-202ENST00000428394 FSHBP01225 129 aa12.34□□□□□ -0.43
HCLS1-202ENST00000428394 LINC01620Q4KN68 170 aa12.34□□□□□ -0.43
HCLS1-202ENST00000428394 VSIG2Q96IQ7 327 aa12.34□□□□□ -0.43
HCLS1-202ENST00000428394 TRBV10-2A0A0K0K1G8 114 aa12.33□□□□□ -0.44
HCLS1-202ENST00000428394 C9JAW5 83 aa12.33□□□□□ -0.44
HCLS1-202ENST00000428394 TIRAPP58753 221 aa12.33□□□□□ -0.44
HCLS1-202ENST00000428394 BEAN1Q3B7T3 259 aa12.33□□□□□ -0.44
HCLS1-202ENST00000428394 TMEM95Q3KNT9 176 aa12.33□□□□□ -0.44
HCLS1-202ENST00000428394 ZFAND6Q6FIF0 208 aa12.33□□□□□ -0.44
HCLS1-202ENST00000428394 OPRPNQ99935 248 aaPredicted RBP12.33□□□□□ -0.44
HCLS1-202ENST00000428394 PEMTQ9UBM1 199 aa12.33□□□□□ -0.44
HCLS1-202ENST00000428394 IGLV5-45A0A087WSX0 123 aa12.32□□□□□ -0.44
HCLS1-202ENST00000428394 H3BMM0 161 aa12.32□□□□□ -0.44
HCLS1-202ENST00000428394 IGHV3-53P01767 116 aa12.32□□□□□ -0.44
HCLS1-202ENST00000428394 WFDC12Q8WWY7 111 aa12.32□□□□□ -0.44
HCLS1-202ENST00000428394 ANKRD17O75179 2603 aaKnown RBP12.32□□□□□ -0.44
HCLS1-202ENST00000428394 EIF4EBP3O60516 100 aaPredicted RBP12.31□□□□□ -0.44
HCLS1-202ENST00000428394 IGKV3-20P01619 116 aa12.31□□□□□ -0.44
HCLS1-202ENST00000428394 XGP55808 180 aa12.31□□□□□ -0.44
HCLS1-202ENST00000428394 MRPL23Q16540 153 aaKnown RBP12.31□□□□□ -0.44
HCLS1-202ENST00000428394 Q1RN00 199 aa12.31□□□□□ -0.44
HCLS1-202ENST00000428394 FAM104AQ969W3 186 aa12.31□□□□□ -0.44
HCLS1-202ENST00000428394 NDUFA12Q9UI09 145 aa12.31□□□□□ -0.44
HCLS1-202ENST00000428394 UBE2D4Q9Y2X8 147 aa12.31□□□□□ -0.44
HCLS1-202ENST00000428394 Q6Q795 121 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 Q6YL49 198 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 FAM19A3Q7Z5A8 133 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 Q8N2B8 174 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 ZNF702PQ9H963 129 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 ABCA12Q86UK0 2595 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 FHL3Q13643 280 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 SFTA2Q6UW10 78 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 RAX2Q96IS3 184 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
HCLS1-202ENST00000428394 GEMIN7Q9H840 131 aaKnown RBP12.3□□□□□ -0.44
HCLS1-202ENST00000428394 A0A096LNT2 108 aa12.29□□□□□ -0.44
HCLS1-202ENST00000428394 MT-ATP8P03928 68 aa12.29□□□□□ -0.44
HCLS1-202ENST00000428394 CELSR2Q9HCU4 2923 aa12.28□□□□□ -0.44
HCLS1-202ENST00000428394 FAM240AA0A1B0GVK7 77 aa12.28□□□□□ -0.44
HCLS1-202ENST00000428394 NDUFA1O15239 70 aa12.28□□□□□ -0.44
HCLS1-202ENST00000428394 RS1O15537 224 aa12.28□□□□□ -0.44
HCLS1-202ENST00000428394 CITED1Q99966 193 aa12.28□□□□□ -0.44
HCLS1-202ENST00000428394 ICOSQ9Y6W8 199 aa12.28□□□□□ -0.44
HCLS1-202ENST00000428394 INSP01308 110 aa12.27□□□□□ -0.44
HCLS1-202ENST00000428394 RBMY1A1P0DJD3 496 aaKnown RBP12.27□□□□□ -0.44
HCLS1-202ENST00000428394 RBMY1CP0DJD4 496 aa12.27□□□□□ -0.44
HCLS1-202ENST00000428394 RBMY1FQ15415 496 aaKnown RBP12.27□□□□□ -0.44
HCLS1-202ENST00000428394 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.27□□□□□ -0.45
HCLS1-202ENST00000428394 DEFB131AP59861 70 aa12.26□□□□□ -0.45
HCLS1-202ENST00000428394 CIRBPQ14011 172 aaKnown RBP12.26□□□□□ -0.45
HCLS1-202ENST00000428394 TRIAP1O43715 76 aa12.26□□□□□ -0.45
HCLS1-202ENST00000428394 TMEM61Q8N0U2 210 aa12.26□□□□□ -0.45
HCLS1-202ENST00000428394 TEX29Q8N6K0 151 aa12.26□□□□□ -0.45
HCLS1-202ENST00000428394 C4orf3Q8WVX3 66 aa12.26□□□□□ -0.45
HCLS1-202ENST00000428394 CSDC2Q9Y534 153 aaKnown RBP12.26□□□□□ -0.45
HCLS1-202ENST00000428394 TRAV25A0A0B4J276 109 aa12.25□□□□□ -0.45
HCLS1-202ENST00000428394 HERVK_113P63121 156 aa12.25□□□□□ -0.45
HCLS1-202ENST00000428394 DEFB121Q5J5C9 76 aa12.25□□□□□ -0.45
HCLS1-202ENST00000428394 C10orf99Q6UWK7 81 aa12.25□□□□□ -0.45
HCLS1-202ENST00000428394 C11orf72Q8NBR9 251 aa12.25□□□□□ -0.45
HCLS1-202ENST00000428394 UBE2WQ96B02 151 aa12.25□□□□□ -0.45
HCLS1-202ENST00000428394 CRYBG3Q68DQ2 2970 aa12.25□□□□□ -0.45
HCLS1-202ENST00000428394 IGHV3-64A0A075B6Q5 118 aa12.24□□□□□ -0.45
HCLS1-202ENST00000428394 KNCNA6PVL3 124 aa12.24□□□□□ -0.45
HCLS1-202ENST00000428394 IGLV5-39A0A0G2JS06 123 aa12.23□□□□□ -0.45
HCLS1-202ENST00000428394 TRBV10-1A0A0K0K1A3 114 aa12.23□□□□□ -0.45
HCLS1-202ENST00000428394 LST1O00453 97 aa12.23□□□□□ -0.45
HCLS1-202ENST00000428394 DEFB104AQ8WTQ1 72 aa12.23□□□□□ -0.45
HCLS1-202ENST00000428394 NTN5Q8WTR8 489 aaPredicted RBP12.23□□□□□ -0.45
HCLS1-202ENST00000428394 POLQO75417 2590 aa12.23□□□□□ -0.45
HCLS1-202ENST00000428394 RBMY1BA6NDE4 496 aaKnown RBP12.22□□□□□ -0.45
HCLS1-202ENST00000428394 RBMY1EA6NEQ0 496 aaKnown RBP12.22□□□□□ -0.45
HCLS1-202ENST00000428394 SNCGO76070 127 aa12.22□□□□□ -0.45
HCLS1-202ENST00000428394 PRSS2P07478 247 aa12.22□□□□□ -0.45
HCLS1-202ENST00000428394 RBMY1DP0C7P1 496 aaKnown RBP12.22□□□□□ -0.45
HCLS1-202ENST00000428394 C2CD3Q4AC94 2353 aa12.22□□□□□ -0.45
HCLS1-202ENST00000428394 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
HCLS1-202ENST00000428394 MAP6D1Q9H9H5 199 aa12.22□□□□□ -0.45
HCLS1-202ENST00000428394 TRAV8-3A0A0A6YYJ7 113 aa12.21□□□□□ -0.46
HCLS1-202ENST00000428394 H7C2G1 150 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms