RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 HNRNPA3P51991 378 aaKnown RBP11.12□□□□□ -0.63
DDR1-235ENST00000428153 NKX2-5P52952 324 aaPredicted RBP11.12□□□□□ -0.63
DDR1-235ENST00000428153 C9orf62Q8N4C0 152 aa11.12□□□□□ -0.63
DDR1-235ENST00000428153 CNFNQ9BYD5 112 aa11.12□□□□□ -0.63
DDR1-235ENST00000428153 IGLV4-60A0A075B6I1 120 aa11.11□□□□□ -0.63
DDR1-235ENST00000428153 MEF2BQ02080 365 aaPredicted RBP11.11□□□□□ -0.63
DDR1-235ENST00000428153 UBE2L6O14933 153 aa11.1□□□□□ -0.63
DDR1-235ENST00000428153 IFNA1P01562 189 aa11.1□□□□□ -0.63
DDR1-235ENST00000428153 NTF3P20783 257 aa11.1□□□□□ -0.63
DDR1-235ENST00000428153 COTL1Q14019 142 aa11.1□□□□□ -0.63
DDR1-235ENST00000428153 CTRLP40313 264 aa11.09□□□□□ -0.63
DDR1-235ENST00000428153 CFAP161Q6P656 301 aa11.09□□□□□ -0.63
DDR1-235ENST00000428153 LYZL1Q6UWQ5 148 aa11.09□□□□□ -0.63
DDR1-235ENST00000428153 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
DDR1-235ENST00000428153 TRBV20OR9-2A0A075B6H5 130 aa11.08□□□□□ -0.64
DDR1-235ENST00000428153 RAB19A4D1S5 217 aa11.08□□□□□ -0.64
DDR1-235ENST00000428153 TAGLN2P37802 199 aaKnown RBP11.08□□□□□ -0.64
DDR1-235ENST00000428153 AMTP48728 403 aa11.08□□□□□ -0.64
DDR1-235ENST00000428153 SULT1A2P50226 295 aa11.08□□□□□ -0.64
DDR1-235ENST00000428153 SPACA4Q8TDM5 124 aa11.08□□□□□ -0.64
DDR1-235ENST00000428153 SLPIP03973 132 aa11.07□□□□□ -0.64
DDR1-235ENST00000428153 MED9Q9NWA0 146 aa11.07□□□□□ -0.64
DDR1-235ENST00000428153 A0A087WYN8 130 aa11.06□□□□□ -0.64
DDR1-235ENST00000428153 NCR2O95944 276 aa11.06□□□□□ -0.64
DDR1-235ENST00000428153 MT1HL1P0DM35 61 aa11.06□□□□□ -0.64
DDR1-235ENST00000428153 BCL2P10415 239 aa11.06□□□□□ -0.64
DDR1-235ENST00000428153 PLAC8Q9NZF1 115 aa11.06□□□□□ -0.64
DDR1-235ENST00000428153 H7C423 109 aa11.05□□□□□ -0.64
DDR1-235ENST00000428153 NUDT10Q8NFP7 164 aa11.05□□□□□ -0.64
DDR1-235ENST00000428153 NUDT11Q96G61 164 aa11.05□□□□□ -0.64
DDR1-235ENST00000428153 TWIST1Q15672 202 aa11.04□□□□□ -0.64
DDR1-235ENST00000428153 TEX261Q6UWH6 196 aa11.04□□□□□ -0.64
DDR1-235ENST00000428153 C15orf56Q8N910 161 aa11.04□□□□□ -0.64
DDR1-235ENST00000428153 DPH3Q96FX2 82 aa11.04□□□□□ -0.64
DDR1-235ENST00000428153 RPS10P46783 165 aaKnown RBP11.03□□□□□ -0.64
DDR1-235ENST00000428153 GATD1Q8NB37 220 aa11.03□□□□□ -0.64
DDR1-235ENST00000428153 FAM210AQ96ND0 272 aa11.03□□□□□ -0.64
DDR1-235ENST00000428153 C7orf33Q8WU49 177 aa11.02□□□□□ -0.65
DDR1-235ENST00000428153 RPP21Q9H633 154 aaKnown RBP11.02□□□□□ -0.65
DDR1-235ENST00000428153 GAGE12HA6NDE8 117 aa11.01□□□□□ -0.65
DDR1-235ENST00000428153 NDUFS6O75380 124 aaKnown RBP11.01□□□□□ -0.65
DDR1-235ENST00000428153 CHTF8P0CG12 524 aa11.01□□□□□ -0.65
DDR1-235ENST00000428153 SMIM15Q7Z3B0 74 aa11.01□□□□□ -0.65
DDR1-235ENST00000428153 GVQW2A0A096LPI5 108 aaPredicted RBP11□□□□□ -0.65
DDR1-235ENST00000428153 ZNF25P17030 456 aaPredicted RBP11□□□□□ -0.65
DDR1-235ENST00000428153 AMMECR1LQ6DCA0 310 aa11□□□□□ -0.65
DDR1-235ENST00000428153 PKIGQ9Y2B9 76 aa11□□□□□ -0.65
DDR1-235ENST00000428153 APCSP02743 223 aa10.99□□□□□ -0.65
DDR1-235ENST00000428153 COX6A2Q02221 97 aa10.99□□□□□ -0.65
DDR1-235ENST00000428153 Q6ZNX1 250 aa10.99□□□□□ -0.65
DDR1-235ENST00000428153 SLC51BQ86UW2 128 aa10.99□□□□□ -0.65
DDR1-235ENST00000428153 CHCHD10Q8WYQ3 142 aaPredicted RBP10.99□□□□□ -0.65
DDR1-235ENST00000428153 PHOX2AO14813 284 aa10.98□□□□□ -0.65
DDR1-235ENST00000428153 OCC1Q8TAD7 63 aa10.98□□□□□ -0.65
DDR1-235ENST00000428153 RNASE7Q9H1E1 156 aaKnown RBP10.98□□□□□ -0.65
DDR1-235ENST00000428153 LINC00474Q9P2X8 69 aa10.98□□□□□ -0.65
DDR1-235ENST00000428153 TNXBP22105 4242 aa10.98□□□□□ -0.65
DDR1-235ENST00000428153 TRAV26-2A0A0B4J265 109 aa10.97□□□□□ -0.65
DDR1-235ENST00000428153 SDHAF1A6NFY7 115 aa10.97□□□□□ -0.65
DDR1-235ENST00000428153 K7EN84 100 aa10.97□□□□□ -0.65
DDR1-235ENST00000428153 FGF6P10767 208 aa10.97□□□□□ -0.65
DDR1-235ENST00000428153 TCTE3Q8IZS6 198 aa10.97□□□□□ -0.65
DDR1-235ENST00000428153 TRBV6-5A0A0K0K1A5 114 aa10.96□□□□□ -0.65
DDR1-235ENST00000428153 TMEM250H0YL14 139 aa10.96□□□□□ -0.65
DDR1-235ENST00000428153 RNASEKQ6P5S7 137 aaKnown RBP10.96□□□□□ -0.65
DDR1-235ENST00000428153 FAM231DQ6ZW35 169 aa10.96□□□□□ -0.65
DDR1-235ENST00000428153 OR5A1Q8NGJ0 315 aa10.96□□□□□ -0.65
DDR1-235ENST00000428153 PRSS3P2Q8NHM4 247 aa10.96□□□□□ -0.65
DDR1-235ENST00000428153 GTSF1Q8WW33 167 aa10.96□□□□□ -0.65
DDR1-235ENST00000428153 hCG_2014768A0A024R1R8 64 aa10.95□□□□□ -0.66
DDR1-235ENST00000428153 IGKV3OR2-268A0A0C4DH90 116 aa10.95□□□□□ -0.66
DDR1-235ENST00000428153 A8MWL6 223 aa10.95□□□□□ -0.66
DDR1-235ENST00000428153 I3L3M4 83 aa10.95□□□□□ -0.66
DDR1-235ENST00000428153 FOXA3P55318 350 aaPredicted RBP10.95□□□□□ -0.66
DDR1-235ENST00000428153 FOXI1Q12951 378 aa10.95□□□□□ -0.66
DDR1-235ENST00000428153 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
DDR1-235ENST00000428153 HIGD2BQ4VC39 106 aa10.95□□□□□ -0.66
DDR1-235ENST00000428153 CT83Q5H943 113 aa10.95□□□□□ -0.66
DDR1-235ENST00000428153 RPL39LQ96EH5 51 aaKnown RBP10.95□□□□□ -0.66
DDR1-235ENST00000428153 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
DDR1-235ENST00000428153 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.94□□□□□ -0.66
DDR1-235ENST00000428153 IGKV2-29A2NJV5 120 aaPredicted RBP10.94□□□□□ -0.66
DDR1-235ENST00000428153 TMEM101Q96IK0 257 aa10.94□□□□□ -0.66
DDR1-235ENST00000428153 ESDP10768 282 aa10.93□□□□□ -0.66
DDR1-235ENST00000428153 PRR3P79522 188 aaKnown RBP10.93□□□□□ -0.66
DDR1-235ENST00000428153 STPG4Q8N801 248 aa10.93□□□□□ -0.66
DDR1-235ENST00000428153 LINC01600Q96MT4 127 aa10.93□□□□□ -0.66
DDR1-235ENST00000428153 IGHV1-58A0A0C4DH39 117 aa10.92□□□□□ -0.66
DDR1-235ENST00000428153 IGKV2-24A0A0C4DH68 120 aa10.92□□□□□ -0.66
DDR1-235ENST00000428153 FAM231BA6NCW3 169 aa10.92□□□□□ -0.66
DDR1-235ENST00000428153 GATCO43716 136 aaKnown RBP10.92□□□□□ -0.66
DDR1-235ENST00000428153 PMCHP20382 165 aa10.92□□□□□ -0.66
DDR1-235ENST00000428153 LRP2P98164 4655 aa10.92□□□□□ -0.66
DDR1-235ENST00000428153 MRPL52Q86TS9 123 aaKnown RBP10.91□□□□□ -0.66
DDR1-235ENST00000428153 A0A096LNI7 61 aa10.9□□□□□ -0.66
DDR1-235ENST00000428153 LINC00959A0A1B0GUT2 108 aa10.9□□□□□ -0.66
DDR1-235ENST00000428153 BORCS7Q96B45 105 aa10.9□□□□□ -0.66
DDR1-235ENST00000428153 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
DDR1-235ENST00000428153 TRBV27A0A0K0K1C4 114 aa10.89□□□□□ -0.67
DDR1-235ENST00000428153 A0A1B0GVG6 124 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms