RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 PRSS2P07478 247 aa10.55□□□□□ -0.72
ERCC3-202ENST00000426778 RHODO00212 210 aa10.55□□□□□ -0.72
ERCC3-202ENST00000426778 CD28P10747 220 aa10.55□□□□□ -0.72
ERCC3-202ENST00000426778 Q1RN00 199 aa10.55□□□□□ -0.72
ERCC3-202ENST00000426778 PRO1854Q9UHT4 67 aa10.55□□□□□ -0.72
ERCC3-202ENST00000426778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.54□□□□□ -0.72
ERCC3-202ENST00000426778 TRBV6-5A0A0K0K1A5 114 aa10.54□□□□□ -0.72
ERCC3-202ENST00000426778 IGKV2-29A2NJV5 120 aaPredicted RBP10.54□□□□□ -0.72
ERCC3-202ENST00000426778 I3L3M4 83 aa10.54□□□□□ -0.72
ERCC3-202ENST00000426778 MT-ATP8P03928 68 aa10.54□□□□□ -0.72
ERCC3-202ENST00000426778 RPL32P62910 135 aaKnown RBP10.54□□□□□ -0.72
ERCC3-202ENST00000426778 ITPR3Q14573 2671 aa10.54□□□□□ -0.72
ERCC3-202ENST00000426778 FLNAP21333 2647 aaKnown RBP10.54□□□□□ -0.72
ERCC3-202ENST00000426778 CDIP1Q9H305 208 aa10.54□□□□□ -0.72
ERCC3-202ENST00000426778 APCP25054 2843 aa10.54□□□□□ -0.72
ERCC3-202ENST00000426778 PRB1P04280 392 aa10.53□□□□□ -0.72
ERCC3-202ENST00000426778 C11orf44Q8N8P7 122 aa10.53□□□□□ -0.72
ERCC3-202ENST00000426778 RBMY1BA6NDE4 496 aaKnown RBP10.53□□□□□ -0.72
ERCC3-202ENST00000426778 RBMY1EA6NEQ0 496 aaKnown RBP10.53□□□□□ -0.72
ERCC3-202ENST00000426778 RBMY1DP0C7P1 496 aaKnown RBP10.53□□□□□ -0.72
ERCC3-202ENST00000426778 DAND5Q8N907 189 aa10.53□□□□□ -0.72
ERCC3-202ENST00000426778 FN1P02751 2386 aaKnown RBP10.53□□□□□ -0.72
ERCC3-202ENST00000426778 C9JAW5 83 aa10.52□□□□□ -0.72
ERCC3-202ENST00000426778 NSUN5P1Q3KNT7 163 aa10.52□□□□□ -0.72
ERCC3-202ENST00000426778 ANKRD29Q8N6D5 301 aa10.52□□□□□ -0.72
ERCC3-202ENST00000426778 FAM104AQ969W3 186 aa10.52□□□□□ -0.72
ERCC3-202ENST00000426778 IGHV3OR16-12A0A075B7B8 117 aa10.51□□□□□ -0.73
ERCC3-202ENST00000426778 LEPROTO15243 131 aa10.51□□□□□ -0.73
ERCC3-202ENST00000426778 SPINK8P0C7L1 97 aa10.51□□□□□ -0.73
ERCC3-202ENST00000426778 IGHV3-30-3P0DP02 117 aa10.51□□□□□ -0.73
ERCC3-202ENST00000426778 XGP55808 180 aa10.51□□□□□ -0.73
ERCC3-202ENST00000426778 A0A0U1RRA0 63 aa10.51□□□□□ -0.73
ERCC3-202ENST00000426778 ADAMTSL4-AS1Q5T5F5 129 aa10.51□□□□□ -0.73
ERCC3-202ENST00000426778 A0A0J9YXY3 114 aa10.5□□□□□ -0.73
ERCC3-202ENST00000426778 NBEAL2Q6ZNJ1 2754 aa10.5□□□□□ -0.73
ERCC3-202ENST00000426778 IGHV3-33P01772 117 aa10.5□□□□□ -0.73
ERCC3-202ENST00000426778 RHOHQ15669 191 aa10.5□□□□□ -0.73
ERCC3-202ENST00000426778 TMEM61Q8N0U2 210 aa10.5□□□□□ -0.73
ERCC3-202ENST00000426778 TNFRSF18Q9Y5U5 241 aa10.5□□□□□ -0.73
ERCC3-202ENST00000426778 A8MWV9 139 aa10.49□□□□□ -0.73
ERCC3-202ENST00000426778 TIMM21Q9BVV7 248 aa10.49□□□□□ -0.73
ERCC3-202ENST00000426778 TEN1Q86WV5 123 aa10.49□□□□□ -0.73
ERCC3-202ENST00000426778 LINC01356Q8N9X3 169 aa10.49□□□□□ -0.73
ERCC3-202ENST00000426778 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
ERCC3-202ENST00000426778 ZNF702PQ9H963 129 aa10.49□□□□□ -0.73
ERCC3-202ENST00000426778 ERG28Q9UKR5 140 aa10.49□□□□□ -0.73
ERCC3-202ENST00000426778 TRGV11A0A075B6L2 103 aa10.48□□□□□ -0.73
ERCC3-202ENST00000426778 SLC25A20O43772 301 aa10.47□□□□□ -0.73
ERCC3-202ENST00000426778 Q6ZUT4 128 aa10.47□□□□□ -0.73
ERCC3-202ENST00000426778 ZNF625Q96I27 306 aaPredicted RBP10.47□□□□□ -0.73
ERCC3-202ENST00000426778 VPREB3Q9UKI3 123 aa10.47□□□□□ -0.73
ERCC3-202ENST00000426778 KRTAP10-9P60411 292 aa10.47□□□□□ -0.73
ERCC3-202ENST00000426778 ODF3Q96PU9 254 aa10.47□□□□□ -0.73
ERCC3-202ENST00000426778 LINC01587Q99440 93 aa10.47□□□□□ -0.73
ERCC3-202ENST00000426778 CKS1BP61024 79 aa10.47□□□□□ -0.73
ERCC3-202ENST00000426778 PPDPFLQ8WWR9 84 aa10.47□□□□□ -0.73
ERCC3-202ENST00000426778 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
ERCC3-202ENST00000426778 GCN1Q92616 2671 aaKnown RBP10.47□□□□□ -0.73
ERCC3-202ENST00000426778 H3BMM0 161 aa10.46□□□□□ -0.73
ERCC3-202ENST00000426778 NDUFA7O95182 113 aa10.46□□□□□ -0.73
ERCC3-202ENST00000426778 Q5PR19 223 aa10.46□□□□□ -0.73
ERCC3-202ENST00000426778 UBE2E2Q96LR5 201 aa10.46□□□□□ -0.73
ERCC3-202ENST00000426778 XCL2Q9UBD3 114 aa10.46□□□□□ -0.73
ERCC3-202ENST00000426778 NDUFA12Q9UI09 145 aa10.45□□□□□ -0.74
ERCC3-202ENST00000426778 A0A1W2PRX2 142 aa10.45□□□□□ -0.74
ERCC3-202ENST00000426778 IGHV3-53P01767 116 aa10.45□□□□□ -0.74
ERCC3-202ENST00000426778 LYRM7Q5U5X0 104 aa10.45□□□□□ -0.74
ERCC3-202ENST00000426778 CR1P17927 2039 aa10.45□□□□□ -0.74
ERCC3-202ENST00000426778 TRBV20-1A0A075B6N2 111 aa10.44□□□□□ -0.74
ERCC3-202ENST00000426778 M0R2P5 195 aa10.44□□□□□ -0.74
ERCC3-202ENST00000426778 TRIAP1O43715 76 aa10.44□□□□□ -0.74
ERCC3-202ENST00000426778 NTN5Q8WTR8 489 aaPredicted RBP10.44□□□□□ -0.74
ERCC3-202ENST00000426778 CHCHD7Q9BUK0 85 aa10.44□□□□□ -0.74
ERCC3-202ENST00000426778 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.44□□□□□ -0.74
ERCC3-202ENST00000426778 ATP6V0E2Q8NHE4 81 aa10.44□□□□□ -0.74
ERCC3-202ENST00000426778 LITAFQ99732 161 aa10.44□□□□□ -0.74
ERCC3-202ENST00000426778 TEX49A0A1B0GTD5 131 aa10.43□□□□□ -0.74
ERCC3-202ENST00000426778 CLEC2BQ92478 149 aa10.43□□□□□ -0.74
ERCC3-202ENST00000426778 UBR5O95071 2799 aaPredicted RBP10.43□□□□□ -0.74
ERCC3-202ENST00000426778 A0A096LNT2 108 aa10.43□□□□□ -0.74
ERCC3-202ENST00000426778 CDKN2A-AS1Q9UH64 79 aa10.43□□□□□ -0.74
ERCC3-202ENST00000426778 UBE2D4Q9Y2X8 147 aa10.42□□□□□ -0.74
ERCC3-202ENST00000426778 CRYBA4P53673 196 aa10.42□□□□□ -0.74
ERCC3-202ENST00000426778 DYNLRB2Q8TF09 96 aa10.42□□□□□ -0.74
ERCC3-202ENST00000426778 SCGB1A1P11684 91 aa10.41□□□□□ -0.74
ERCC3-202ENST00000426778 MRPS36P82909 103 aaKnown RBP10.41□□□□□ -0.74
ERCC3-202ENST00000426778 MAP6D1Q9H9H5 199 aa10.41□□□□□ -0.74
ERCC3-202ENST00000426778 A0A1B0GV72 72 aa10.41□□□□□ -0.74
ERCC3-202ENST00000426778 CIDEAO60543 219 aa10.41□□□□□ -0.74
ERCC3-202ENST00000426778 COX6A2Q02221 97 aa10.41□□□□□ -0.74
ERCC3-202ENST00000426778 Q6YL49 198 aa10.41□□□□□ -0.74
ERCC3-202ENST00000426778 GEMIN7Q9H840 131 aaKnown RBP10.41□□□□□ -0.74
ERCC3-202ENST00000426778 IGHV1-58A0A0C4DH39 117 aa10.4□□□□□ -0.74
ERCC3-202ENST00000426778 GATA3P23771 443 aa10.4□□□□□ -0.74
ERCC3-202ENST00000426778 TMEM89A2RUT3 159 aa10.4□□□□□ -0.75
ERCC3-202ENST00000426778 VSIG2Q96IQ7 327 aa10.4□□□□□ -0.75
ERCC3-202ENST00000426778 ITPR2Q14571 2701 aa10.39□□□□□ -0.75
ERCC3-202ENST00000426778 A0A0B4J2C4 111 aa10.39□□□□□ -0.75
ERCC3-202ENST00000426778 LINC00694P0DN24 101 aa10.39□□□□□ -0.75
ERCC3-202ENST00000426778 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms