RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 PYY3Q5JQD4 70 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 C2orf66Q6UXQ4 117 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 LINC00173Q6ZV60 143 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 TOMM6Q96B49 74 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 CYSLTR1Q9Y271 337 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 LOC100131303A0A0U1RQF7 123 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 HTN3P15516 51 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 IFI27L1Q96BM0 104 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 ATP5LO75964 103 aa10.63□□□□□ -0.71
GINS3-203ENST00000426538 SMIM6P0DI80 62 aa10.63□□□□□ -0.71
GINS3-203ENST00000426538 GYPEP15421 78 aa10.63□□□□□ -0.71
GINS3-203ENST00000426538 C11orf45Q8TAV5 145 aa10.63□□□□□ -0.71
GINS3-203ENST00000426538 H0Y8G0 127 aa10.62□□□□□ -0.71
GINS3-203ENST00000426538 SCGB3A1Q96QR1 104 aa10.62□□□□□ -0.71
GINS3-203ENST00000426538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.61□□□□□ -0.71
GINS3-203ENST00000426538 SYS1-DBNDD2H3BUS1 97 aa10.61□□□□□ -0.71
GINS3-203ENST00000426538 B9D2Q9BPU9 175 aa10.61□□□□□ -0.71
GINS3-203ENST00000426538 A0A0J9YY99 117 aa10.61□□□□□ -0.71
GINS3-203ENST00000426538 C20orf203Q8NBC4 194 aa10.61□□□□□ -0.71
GINS3-203ENST00000426538 TRAV26-1A0A087WT03 109 aa10.6□□□□□ -0.71
GINS3-203ENST00000426538 PRSS1P07477 247 aa10.6□□□□□ -0.71
GINS3-203ENST00000426538 RPL39P62891 51 aaKnown RBP10.6□□□□□ -0.71
GINS3-203ENST00000426538 PET117Q6UWS5 81 aa10.6□□□□□ -0.71
GINS3-203ENST00000426538 ERASQ7Z444 233 aa10.6□□□□□ -0.71
GINS3-203ENST00000426538 LINC00518Q8N0U6 118 aa10.6□□□□□ -0.71
GINS3-203ENST00000426538 C12orf57Q99622 126 aa10.6□□□□□ -0.71
GINS3-203ENST00000426538 C20orf202A1L168 122 aa10.59□□□□□ -0.71
GINS3-203ENST00000426538 Q6ZN92 141 aa10.59□□□□□ -0.71
GINS3-203ENST00000426538 Q6ZTC4 211 aa10.59□□□□□ -0.71
GINS3-203ENST00000426538 VSIG2Q96IQ7 327 aa10.59□□□□□ -0.71
GINS3-203ENST00000426538 DNHD1Q96M86 4753 aa10.59□□□□□ -0.71
GINS3-203ENST00000426538 NANOS2P60321 138 aaKnown RBP10.58□□□□□ -0.72
GINS3-203ENST00000426538 SPATA12Q7Z6I5 190 aa10.58□□□□□ -0.72
GINS3-203ENST00000426538 ATP6V0E2Q8NHE4 81 aa10.58□□□□□ -0.72
GINS3-203ENST00000426538 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
GINS3-203ENST00000426538 TMEM97Q5BJF2 176 aa10.58□□□□□ -0.72
GINS3-203ENST00000426538 LINC00694P0DN24 101 aa10.57□□□□□ -0.72
GINS3-203ENST00000426538 DEFA6Q01524 100 aa10.57□□□□□ -0.72
GINS3-203ENST00000426538 TMEM141Q96I45 108 aa10.57□□□□□ -0.72
GINS3-203ENST00000426538 CHCHD7Q9BUK0 85 aa10.57□□□□□ -0.72
GINS3-203ENST00000426538 MRPL23Q16540 153 aaKnown RBP10.56□□□□□ -0.72
GINS3-203ENST00000426538 NTM-AS1Q6ZSK4 140 aa10.56□□□□□ -0.72
GINS3-203ENST00000426538 TIMM17AQ99595 171 aa10.56□□□□□ -0.72
GINS3-203ENST00000426538 TENM3Q9P273 2699 aa10.56□□□□□ -0.72
GINS3-203ENST00000426538 TRBV25-1A0A075B6N4 114 aa10.55□□□□□ -0.72
GINS3-203ENST00000426538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.55□□□□□ -0.72
GINS3-203ENST00000426538 IGKV2-29A2NJV5 120 aaPredicted RBP10.55□□□□□ -0.72
GINS3-203ENST00000426538 IGIPA6NJ69 53 aa10.55□□□□□ -0.72
GINS3-203ENST00000426538 S100A12P80511 92 aa10.55□□□□□ -0.72
GINS3-203ENST00000426538 Q8N976 141 aa10.55□□□□□ -0.72
GINS3-203ENST00000426538 ICOSQ9Y6W8 199 aa10.55□□□□□ -0.72
GINS3-203ENST00000426538 DEFB131BA0A096LNP1 70 aa10.55□□□□□ -0.72
GINS3-203ENST00000426538 A0A096LPF7 62 aa10.55□□□□□ -0.72
GINS3-203ENST00000426538 NHLRC4P0CG21 123 aaPredicted RBP10.55□□□□□ -0.72
GINS3-203ENST00000426538 LINC01545Q5VT33 79 aa10.55□□□□□ -0.72
GINS3-203ENST00000426538 SH2D6Q7Z4S9 175 aa10.55□□□□□ -0.72
GINS3-203ENST00000426538 TRBV6-8A0A0A6YYG3 113 aa10.54□□□□□ -0.72
GINS3-203ENST00000426538 UBE2L6O14933 153 aa10.54□□□□□ -0.72
GINS3-203ENST00000426538 SMAGPQ0VAQ4 97 aa10.54□□□□□ -0.72
GINS3-203ENST00000426538 LGALS9CQ6DKI2 356 aa10.54□□□□□ -0.72
GINS3-203ENST00000426538 TMEM243Q9BU79 118 aa10.54□□□□□ -0.72
GINS3-203ENST00000426538 PYGO1Q9Y3Y4 419 aa10.54□□□□□ -0.72
GINS3-203ENST00000426538 H3BNG1 76 aa10.53□□□□□ -0.72
GINS3-203ENST00000426538 PAPPA-AS1Q5QFB9 102 aa10.53□□□□□ -0.72
GINS3-203ENST00000426538 DGAT2L7PQ6IED9 249 aa10.53□□□□□ -0.72
GINS3-203ENST00000426538 CDPF1Q6NVV7 123 aa10.53□□□□□ -0.72
GINS3-203ENST00000426538 BAALCQ8WXS3 180 aa10.53□□□□□ -0.72
GINS3-203ENST00000426538 PMCHL2Q9BQD1 86 aa10.53□□□□□ -0.72
GINS3-203ENST00000426538 SPANXA1Q9NS26 97 aa10.53□□□□□ -0.72
GINS3-203ENST00000426538 TRAV12-1A0A0B4J245 112 aa10.52□□□□□ -0.73
GINS3-203ENST00000426538 ATOH7Q8N100 152 aa10.52□□□□□ -0.73
GINS3-203ENST00000426538 UBE2D4Q9Y2X8 147 aa10.52□□□□□ -0.73
GINS3-203ENST00000426538 A0A087WX48 190 aa10.51□□□□□ -0.73
GINS3-203ENST00000426538 TRAV10A0A0B4J240 114 aa10.51□□□□□ -0.73
GINS3-203ENST00000426538 H7C423 109 aa10.51□□□□□ -0.73
GINS3-203ENST00000426538 NPSP0C0P6 89 aa10.51□□□□□ -0.73
GINS3-203ENST00000426538 PMVKQ15126 192 aa10.51□□□□□ -0.73
GINS3-203ENST00000426538 VCX2Q9H322 139 aa10.51□□□□□ -0.73
GINS3-203ENST00000426538 HUWE1Q7Z6Z7 4374 aaKnown RBP10.5□□□□□ -0.73
GINS3-203ENST00000426538 ODF1Q14990 250 aa10.5□□□□□ -0.73
GINS3-203ENST00000426538 AMMECR1LQ6DCA0 310 aa10.5□□□□□ -0.73
GINS3-203ENST00000426538 CEMP1Q6PRD7 247 aaPredicted RBP10.5□□□□□ -0.73
GINS3-203ENST00000426538 TEX43Q6ZNM6 134 aa10.5□□□□□ -0.73
GINS3-203ENST00000426538 OPRPNQ99935 248 aaPredicted RBP10.5□□□□□ -0.73
GINS3-203ENST00000426538 CHCHD5Q9BSY4 110 aa10.5□□□□□ -0.73
GINS3-203ENST00000426538 TIMM21Q9BVV7 248 aa10.5□□□□□ -0.73
GINS3-203ENST00000426538 IGLV4-3A0A075B6K6 122 aa10.5□□□□□ -0.73
GINS3-203ENST00000426538 PRSS29PA6NIE9 313 aa10.5□□□□□ -0.73
GINS3-203ENST00000426538 FGF6P10767 208 aa10.5□□□□□ -0.73
GINS3-203ENST00000426538 VAMP8Q9BV40 100 aa10.5□□□□□ -0.73
GINS3-203ENST00000426538 CHTOPQ9Y3Y2 248 aaKnown RBP10.5□□□□□ -0.73
GINS3-203ENST00000426538 TMEM101Q96IK0 257 aa10.49□□□□□ -0.73
GINS3-203ENST00000426538 CST9LQ9H4G1 147 aa10.49□□□□□ -0.73
GINS3-203ENST00000426538 GAGE6Q13070 117 aa10.48□□□□□ -0.73
GINS3-203ENST00000426538 MRPL52Q86TS9 123 aaKnown RBP10.48□□□□□ -0.73
GINS3-203ENST00000426538 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
GINS3-203ENST00000426538 CSDC2Q9Y534 153 aaKnown RBP10.48□□□□□ -0.73
GINS3-203ENST00000426538 HSBP1L1C9JCN9 74 aa10.47□□□□□ -0.73
GINS3-203ENST00000426538 TMEM262E9PQX1 116 aa10.47□□□□□ -0.73
GINS3-203ENST00000426538 F8VRH5 84 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms