RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 LECT2O14960 151 aa8.44□□□□□ -1.06
GPC1-204ENST00000426280 RHEBQ15382 184 aa8.44□□□□□ -1.06
GPC1-204ENST00000426280 ATP5L2Q7Z4Y8 100 aa8.44□□□□□ -1.06
GPC1-204ENST00000426280 BTF3L4Q96K17 158 aa8.44□□□□□ -1.06
GPC1-204ENST00000426280 IMMP2LQ96T52 175 aa8.44□□□□□ -1.06
GPC1-204ENST00000426280 KLK12Q9UKR0 248 aa8.44□□□□□ -1.06
GPC1-204ENST00000426280 URGCP-MRPS24S4R325 110 aa8.44□□□□□ -1.06
GPC1-204ENST00000426280 A0A087WWC5 75 aa8.43□□□□□ -1.06
GPC1-204ENST00000426280 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
GPC1-204ENST00000426280 PSCAO43653 123 aa8.43□□□□□ -1.06
GPC1-204ENST00000426280 S100A8P05109 93 aa8.43□□□□□ -1.06
GPC1-204ENST00000426280 HAMPP81172 84 aa8.43□□□□□ -1.06
GPC1-204ENST00000426280 NDUFA5Q16718 116 aa8.43□□□□□ -1.06
GPC1-204ENST00000426280 ATRAIDQ6UW56 229 aa8.43□□□□□ -1.06
GPC1-204ENST00000426280 MRAP2Q96G30 205 aa8.43□□□□□ -1.06
GPC1-204ENST00000426280 EREGO14944 169 aa8.42□□□□□ -1.06
GPC1-204ENST00000426280 KCNIP4Q6PIL6 250 aa8.42□□□□□ -1.06
GPC1-204ENST00000426280 Q8N1X5 172 aa8.42□□□□□ -1.06
GPC1-204ENST00000426280 SVBPQ8N300 66 aa8.42□□□□□ -1.06
GPC1-204ENST00000426280 Q8N814 137 aa8.42□□□□□ -1.06
GPC1-204ENST00000426280 NRACQ8N912 160 aa8.42□□□□□ -1.06
GPC1-204ENST00000426280 BAALCQ8WXS3 180 aa8.42□□□□□ -1.06
GPC1-204ENST00000426280 TMEM242Q9NWH2 141 aa8.42□□□□□ -1.06
GPC1-204ENST00000426280 FAM30AQ9NZY2 134 aa8.42□□□□□ -1.06
GPC1-204ENST00000426280 SDHAF1A6NFY7 115 aa8.41□□□□□ -1.06
GPC1-204ENST00000426280 SNAPINO95295 136 aa8.41□□□□□ -1.06
GPC1-204ENST00000426280 LAGE3Q14657 143 aa8.41□□□□□ -1.06
GPC1-204ENST00000426280 ENHOQ6UWT2 76 aa8.41□□□□□ -1.06
GPC1-204ENST00000426280 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.41□□□□□ -1.06
GPC1-204ENST00000426280 FRZBQ92765 325 aa8.41□□□□□ -1.06
GPC1-204ENST00000426280 ST20Q9HBF5 79 aa8.41□□□□□ -1.06
GPC1-204ENST00000426280 TRBV6-5A0A0K0K1A5 114 aa8.4□□□□□ -1.06
GPC1-204ENST00000426280 D6R8Y8 96 aa8.4□□□□□ -1.06
GPC1-204ENST00000426280 GCSHP23434 173 aa8.4□□□□□ -1.06
GPC1-204ENST00000426280 S100PP25815 95 aa8.4□□□□□ -1.06
GPC1-204ENST00000426280 CKS2P33552 79 aa8.4□□□□□ -1.06
GPC1-204ENST00000426280 MPV17L2Q567V2 206 aa8.4□□□□□ -1.06
GPC1-204ENST00000426280 CDPF1Q6NVV7 123 aa8.4□□□□□ -1.06
GPC1-204ENST00000426280 Q8N976 141 aa8.4□□□□□ -1.06
GPC1-204ENST00000426280 UBE2WQ96B02 151 aa8.4□□□□□ -1.06
GPC1-204ENST00000426280 TMEM70Q9BUB7 260 aa8.4□□□□□ -1.06
GPC1-204ENST00000426280 IGLV5-52A0A0A0MRZ9 124 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 TRAV8-3A0A0A6YYJ7 113 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 IGHV1-24A0A0C4DH33 117 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 TMEM262E9PQX1 116 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 NPYP01303 97 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 POLR2KP53803 58 aaKnown RBP8.39□□□□□ -1.07
GPC1-204ENST00000426280 GAGE6Q13070 117 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 COTL1Q14019 142 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 IQCJQ1A5X6 159 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 LINC01620Q4KN68 170 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 TMEM97Q5BJF2 176 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 TMEM136Q6ZRR5 245 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 CHCHD5Q9BSY4 110 aa8.39□□□□□ -1.07
GPC1-204ENST00000426280 TRBV25-1A0A075B6N4 114 aa8.38□□□□□ -1.07
GPC1-204ENST00000426280 IGKV2D-24A0A075B6R9 120 aa8.38□□□□□ -1.07
GPC1-204ENST00000426280 TRAV9-1A0A075B6T8 112 aa8.38□□□□□ -1.07
GPC1-204ENST00000426280 TNFRSF6BO95407 300 aa8.38□□□□□ -1.07
GPC1-204ENST00000426280 PMCHP20382 165 aa8.38□□□□□ -1.07
GPC1-204ENST00000426280 TM2D2Q9BX73 214 aa8.38□□□□□ -1.07
GPC1-204ENST00000426280 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.37□□□□□ -1.07
GPC1-204ENST00000426280 A0A087WX48 190 aa8.37□□□□□ -1.07
GPC1-204ENST00000426280 TGIF2-C20orf24A0A0A6YYL0 155 aa8.37□□□□□ -1.07
GPC1-204ENST00000426280 I3L3M4 83 aa8.37□□□□□ -1.07
GPC1-204ENST00000426280 TSHBP01222 138 aa8.37□□□□□ -1.07
GPC1-204ENST00000426280 SMR3BP02814 79 aaPredicted RBP8.37□□□□□ -1.07
GPC1-204ENST00000426280 AMTP48728 403 aa8.37□□□□□ -1.07
GPC1-204ENST00000426280 SUMO2P61956 95 aaKnown RBP8.37□□□□□ -1.07
GPC1-204ENST00000426280 KIAA1644Q3SXP7 199 aa8.37□□□□□ -1.07
GPC1-204ENST00000426280 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
GPC1-204ENST00000426280 TMEM243Q9BU79 118 aa8.37□□□□□ -1.07
GPC1-204ENST00000426280 DNAH8Q96JB1 4490 aa8.36□□□□□ -1.07
GPC1-204ENST00000426280 TRBV24-1A0A075B6N3 115 aa8.36□□□□□ -1.07
GPC1-204ENST00000426280 RBX1P62877 108 aa8.36□□□□□ -1.07
GPC1-204ENST00000426280 ELOBQ15370 118 aa8.36□□□□□ -1.07
GPC1-204ENST00000426280 KRTAP26-1Q6PEX3 210 aa8.36□□□□□ -1.07
GPC1-204ENST00000426280 ORMDL3Q8N138 153 aa8.36□□□□□ -1.07
GPC1-204ENST00000426280 PRELID3AQ96N28 172 aa8.36□□□□□ -1.07
GPC1-204ENST00000426280 FAT1Q14517 4588 aa8.36□□□□□ -1.07
GPC1-204ENST00000426280 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.35□□□□□ -1.07
GPC1-204ENST00000426280 TRBV27A0A0K0K1C4 114 aa8.35□□□□□ -1.07
GPC1-204ENST00000426280 IGKV2-29A2NJV5 120 aaPredicted RBP8.35□□□□□ -1.07
GPC1-204ENST00000426280 PPP1R17O96001 155 aa8.35□□□□□ -1.07
GPC1-204ENST00000426280 APCSP02743 223 aa8.35□□□□□ -1.07
GPC1-204ENST00000426280 PPBPP02775 128 aa8.35□□□□□ -1.07
GPC1-204ENST00000426280 CLPSL2Q6UWE3 100 aa8.35□□□□□ -1.07
GPC1-204ENST00000426280 CBLN2Q8IUK8 224 aa8.35□□□□□ -1.07
GPC1-204ENST00000426280 CHCHD7Q9BUK0 85 aa8.35□□□□□ -1.07
GPC1-204ENST00000426280 IGLV4-60A0A075B6I1 120 aa8.34□□□□□ -1.07
GPC1-204ENST00000426280 VCYO14598 125 aa8.34□□□□□ -1.07
GPC1-204ENST00000426280 ANGP03950 147 aaKnown RBP8.34□□□□□ -1.07
GPC1-204ENST00000426280 YPEL4Q96NS1 127 aa8.34□□□□□ -1.07
GPC1-204ENST00000426280 C20orf78Q9BR46 151 aa8.34□□□□□ -1.07
GPC1-204ENST00000426280 LOC389332A0A1B0GUA5 103 aa8.33□□□□□ -1.08
GPC1-204ENST00000426280 HLA-DQA1P01909 254 aa8.33□□□□□ -1.08
GPC1-204ENST00000426280 ESDP10768 282 aa8.33□□□□□ -1.08
GPC1-204ENST00000426280 LINC00269Q8N2A0 174 aa8.33□□□□□ -1.08
GPC1-204ENST00000426280 C20orf203Q8NBC4 194 aa8.33□□□□□ -1.08
GPC1-204ENST00000426280 SMIM2Q9BVW6 85 aa8.33□□□□□ -1.08
GPC1-204ENST00000426280 GNB1LQ9BYB4 327 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms