RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 KRTAP17-1Q9BYP8 105 aa12.18□□□□□ -0.46
MSH5-207ENST00000425703 TMEM191AQ9H0A3 160 aa12.18□□□□□ -0.46
MSH5-207ENST00000425703 LECT2O14960 151 aa12.17□□□□□ -0.46
MSH5-207ENST00000425703 SRSF3P84103 164 aaKnown RBP12.17□□□□□ -0.46
MSH5-207ENST00000425703 TMEM70Q9BUB7 260 aa12.17□□□□□ -0.46
MSH5-207ENST00000425703 KRTAP4-5Q9BYR2 181 aa12.17□□□□□ -0.46
MSH5-207ENST00000425703 NCR2O95944 276 aa12.16□□□□□ -0.46
MSH5-207ENST00000425703 LINC00269Q8N2A0 174 aa12.16□□□□□ -0.46
MSH5-207ENST00000425703 ABCA13Q86UQ4 5058 aa12.15□□□□□ -0.46
MSH5-207ENST00000425703 TRBV6-5A0A0K0K1A5 114 aa12.15□□□□□ -0.46
MSH5-207ENST00000425703 AMTP48728 403 aa12.15□□□□□ -0.46
MSH5-207ENST00000425703 ADIRFQ15847 76 aa12.15□□□□□ -0.46
MSH5-207ENST00000425703 RPL39LQ96EH5 51 aaKnown RBP12.15□□□□□ -0.46
MSH5-207ENST00000425703 NAT8BQ9UHF3 227 aa12.15□□□□□ -0.46
MSH5-207ENST00000425703 UBE2L6O14933 153 aa12.14□□□□□ -0.47
MSH5-207ENST00000425703 RIGQ13278 110 aa12.14□□□□□ -0.47
MSH5-207ENST00000425703 C14orf177Q52M58 125 aa12.14□□□□□ -0.47
MSH5-207ENST00000425703 NUP35Q8NFH5 326 aa12.14□□□□□ -0.47
MSH5-207ENST00000425703 SDHAF1A6NFY7 115 aa12.13□□□□□ -0.47
MSH5-207ENST00000425703 REG3AQ06141 175 aa12.13□□□□□ -0.47
MSH5-207ENST00000425703 C20orf203Q8NBC4 194 aa12.13□□□□□ -0.47
MSH5-207ENST00000425703 TRAV8-4A0A0B4J246 113 aa12.12□□□□□ -0.47
MSH5-207ENST00000425703 SMIM27A0A1W2PRY6 76 aa12.12□□□□□ -0.47
MSH5-207ENST00000425703 H7C423 109 aa12.12□□□□□ -0.47
MSH5-207ENST00000425703 MRAP2Q96G30 205 aa12.12□□□□□ -0.47
MSH5-207ENST00000425703 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.11□□□□□ -0.47
MSH5-207ENST00000425703 RAB4AP20338 218 aa12.11□□□□□ -0.47
MSH5-207ENST00000425703 RNF185Q96GF1 192 aa12.11□□□□□ -0.47
MSH5-207ENST00000425703 IGLV4-60A0A075B6I1 120 aa12.1□□□□□ -0.47
MSH5-207ENST00000425703 I3L3M4 83 aa12.1□□□□□ -0.47
MSH5-207ENST00000425703 RAB14P61106 215 aa12.1□□□□□ -0.47
MSH5-207ENST00000425703 KRTAP26-1Q6PEX3 210 aa12.1□□□□□ -0.47
MSH5-207ENST00000425703 ST20Q9HBF5 79 aa12.1□□□□□ -0.47
MSH5-207ENST00000425703 A0A1B0GW15 77 aa12.09□□□□□ -0.47
MSH5-207ENST00000425703 APCSP02743 223 aa12.09□□□□□ -0.47
MSH5-207ENST00000425703 CLPSL2Q6UWE3 100 aa12.09□□□□□ -0.47
MSH5-207ENST00000425703 AMN1Q8IY45 258 aa12.09□□□□□ -0.47
MSH5-207ENST00000425703 DEFB104AQ8WTQ1 72 aa12.09□□□□□ -0.47
MSH5-207ENST00000425703 PPP1R17O96001 155 aa12.08□□□□□ -0.48
MSH5-207ENST00000425703 HLA-DQA1P01909 254 aa12.08□□□□□ -0.48
MSH5-207ENST00000425703 PMCHP20382 165 aa12.08□□□□□ -0.48
MSH5-207ENST00000425703 Q6ZSA8 131 aa12.08□□□□□ -0.48
MSH5-207ENST00000425703 TRBV27A0A0K0K1C4 114 aa12.07□□□□□ -0.48
MSH5-207ENST00000425703 EPM2AB3EWF7 344 aa12.07□□□□□ -0.48
MSH5-207ENST00000425703 USP17L23D6RBM5 183 aa12.07□□□□□ -0.48
MSH5-207ENST00000425703 GAS8-AS1O95177 125 aa12.07□□□□□ -0.48
MSH5-207ENST00000425703 POLR2KP53803 58 aaKnown RBP12.07□□□□□ -0.48
MSH5-207ENST00000425703 FAM30AQ9NZY2 134 aa12.06□□□□□ -0.48
MSH5-207ENST00000425703 ZNF25P17030 456 aaPredicted RBP12.05□□□□□ -0.48
MSH5-207ENST00000425703 RPS10P46783 165 aaKnown RBP12.05□□□□□ -0.48
MSH5-207ENST00000425703 FAM104BQ5XKR9 115 aa12.05□□□□□ -0.48
MSH5-207ENST00000425703 AMMECR1LQ6DCA0 310 aa12.05□□□□□ -0.48
MSH5-207ENST00000425703 DNAH8Q96JB1 4490 aa12.04□□□□□ -0.48
MSH5-207ENST00000425703 IGLV10-54A0A075B6I4 117 aa12.04□□□□□ -0.48
MSH5-207ENST00000425703 TSHBP01222 138 aa12.04□□□□□ -0.48
MSH5-207ENST00000425703 S100A8P05109 93 aa12.04□□□□□ -0.48
MSH5-207ENST00000425703 ESDP10768 282 aa12.04□□□□□ -0.48
MSH5-207ENST00000425703 DGAT2L7PQ6IED9 249 aa12.04□□□□□ -0.48
MSH5-207ENST00000425703 CLRN3Q8NCR9 226 aa12.04□□□□□ -0.48
MSH5-207ENST00000425703 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.03□□□□□ -0.48
MSH5-207ENST00000425703 IGKV2-29A2NJV5 120 aaPredicted RBP12.03□□□□□ -0.48
MSH5-207ENST00000425703 LINC00862A6NCI5 91 aa12.03□□□□□ -0.48
MSH5-207ENST00000425703 VCYO14598 125 aa12.03□□□□□ -0.48
MSH5-207ENST00000425703 PPP1R2P9O14990 202 aa12.03□□□□□ -0.48
MSH5-207ENST00000425703 FGF6P10767 208 aa12.03□□□□□ -0.48
MSH5-207ENST00000425703 PNRC1Q12796 327 aaPredicted RBP12.03□□□□□ -0.48
MSH5-207ENST00000425703 CLLU1Q5K131 121 aa12.03□□□□□ -0.48
MSH5-207ENST00000425703 NRACQ8N912 160 aa12.03□□□□□ -0.48
MSH5-207ENST00000425703 FAT1Q14517 4588 aa12.02□□□□□ -0.48
MSH5-207ENST00000425703 PRSS1P07477 247 aa12.02□□□□□ -0.49
MSH5-207ENST00000425703 CAMPP49913 170 aa12.02□□□□□ -0.49
MSH5-207ENST00000425703 RNASEKQ6P5S7 137 aaKnown RBP12.02□□□□□ -0.49
MSH5-207ENST00000425703 TMEM242Q9NWH2 141 aa12.02□□□□□ -0.49
MSH5-207ENST00000425703 SUMO2P61956 95 aaKnown RBP12.01□□□□□ -0.49
MSH5-207ENST00000425703 HBBP68871 147 aa12.01□□□□□ -0.49
MSH5-207ENST00000425703 MRPL51Q4U2R6 128 aaKnown RBP12.01□□□□□ -0.49
MSH5-207ENST00000425703 Q5VSD8 79 aa12.01□□□□□ -0.49
MSH5-207ENST00000425703 BTF3L4Q96K17 158 aa12.01□□□□□ -0.49
MSH5-207ENST00000425703 TRBV24-1A0A075B6N3 115 aa12□□□□□ -0.49
MSH5-207ENST00000425703 A0A1B0GXF2 115 aa12□□□□□ -0.49
MSH5-207ENST00000425703 F8W036 122 aa12□□□□□ -0.49
MSH5-207ENST00000425703 SMKR1H3BMG3 65 aa12□□□□□ -0.49
MSH5-207ENST00000425703 LINC01620Q4KN68 170 aa12□□□□□ -0.49
MSH5-207ENST00000425703 ATP5L2Q7Z4Y8 100 aa12□□□□□ -0.49
MSH5-207ENST00000425703 MRPL52Q86TS9 123 aaKnown RBP12□□□□□ -0.49
MSH5-207ENST00000425703 TMEM101Q96IK0 257 aa12□□□□□ -0.49
MSH5-207ENST00000425703 C20orf78Q9BR46 151 aa12□□□□□ -0.49
MSH5-207ENST00000425703 C7orf77A4D0Y5 90 aa11.99□□□□□ -0.49
MSH5-207ENST00000425703 FAM229AH3BQW9 127 aa11.99□□□□□ -0.49
MSH5-207ENST00000425703 SMR3BP02814 79 aaPredicted RBP11.99□□□□□ -0.49
MSH5-207ENST00000425703 RPL32P62910 135 aaKnown RBP11.99□□□□□ -0.49
MSH5-207ENST00000425703 HAMPP81172 84 aa11.99□□□□□ -0.49
MSH5-207ENST00000425703 KIR2DL4Q99706 377 aa11.99□□□□□ -0.49
MSH5-207ENST00000425703 FCER1GP30273 86 aa11.98□□□□□ -0.49
MSH5-207ENST00000425703 CKS2P33552 79 aa11.98□□□□□ -0.49
MSH5-207ENST00000425703 CNBPP62633 177 aaKnown RBP11.98□□□□□ -0.49
MSH5-207ENST00000425703 MRPL54Q6P161 138 aaKnown RBP11.98□□□□□ -0.49
MSH5-207ENST00000425703 OR5A1Q8NGJ0 315 aa11.98□□□□□ -0.49
MSH5-207ENST00000425703 ANAPC16Q96DE5 110 aa11.98□□□□□ -0.49
MSH5-207ENST00000425703 SMAGPQ0VAQ4 97 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms