RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 INSP01308 110 aa8.42□□□□□ -1.06
UBR4-207ENST00000425413 RPL32P62910 135 aaKnown RBP8.42□□□□□ -1.06
UBR4-207ENST00000425413 SRSF9Q13242 221 aaKnown RBP eCLIP8.42□□□□□ -1.06
UBR4-207ENST00000425413 E9PLD3 99 aa8.41□□□□□ -1.06
UBR4-207ENST00000425413 NBEAL2Q6ZNJ1 2754 aa8.41□□□□□ -1.06
UBR4-207ENST00000425413 ANK3Q12955 4377 aaKnown RBP8.41□□□□□ -1.06
UBR4-207ENST00000425413 H3BMG7 143 aa8.41□□□□□ -1.06
UBR4-207ENST00000425413 CFAP126Q5VTH2 177 aa8.41□□□□□ -1.06
UBR4-207ENST00000425413 C20orf203Q8NBC4 194 aa8.41□□□□□ -1.06
UBR4-207ENST00000425413 RPL35AP18077 110 aaKnown RBP8.4□□□□□ -1.06
UBR4-207ENST00000425413 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
UBR4-207ENST00000425413 COTL1Q14019 142 aa8.4□□□□□ -1.06
UBR4-207ENST00000425413 TMEM141Q96I45 108 aa8.4□□□□□ -1.06
UBR4-207ENST00000425413 TIMM17AQ99595 171 aa8.4□□□□□ -1.06
UBR4-207ENST00000425413 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.06
UBR4-207ENST00000425413 A0A0J9YXV3 536 aa8.4□□□□□ -1.06
UBR4-207ENST00000425413 OTOGQ6ZRI0 2925 aa8.4□□□□□ -1.07
UBR4-207ENST00000425413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.4□□□□□ -1.07
UBR4-207ENST00000425413 IGKV2-29A2NJV5 120 aaPredicted RBP8.4□□□□□ -1.07
UBR4-207ENST00000425413 C11orf72Q8NBR9 251 aa8.4□□□□□ -1.07
UBR4-207ENST00000425413 TRBV7-3A0A075B6L6 115 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 TEX48A0A1B0GUV7 120 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 G3V4G9 280 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 WFDC2Q14508 124 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 C1orf158Q8N1D5 194 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 VCX2Q9H322 139 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 TSSC4Q9Y5U2 329 aaPredicted RBP8.39□□□□□ -1.07
UBR4-207ENST00000425413 VWFP04275 2813 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 A8MTW9 85 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 A8MWV9 139 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 HERVK_113P61574 105 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 FHL3Q13643 280 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 TAL2Q16559 108 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 TEX29Q8N6K0 151 aa8.39□□□□□ -1.07
UBR4-207ENST00000425413 TRAV2A0A0B4J234 112 aa8.38□□□□□ -1.07
UBR4-207ENST00000425413 APOMO95445 188 aa8.38□□□□□ -1.07
UBR4-207ENST00000425413 RHOHQ15669 191 aa8.38□□□□□ -1.07
UBR4-207ENST00000425413 IGLV4-3A0A075B6K6 122 aa8.38□□□□□ -1.07
UBR4-207ENST00000425413 ADARB2-AS1A8MUL3 147 aa8.37□□□□□ -1.07
UBR4-207ENST00000425413 Q6ZTI0 123 aa8.37□□□□□ -1.07
UBR4-207ENST00000425413 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
UBR4-207ENST00000425413 ZNF418Q8TF45 676 aaPredicted RBP8.37□□□□□ -1.07
UBR4-207ENST00000425413 PGPEP1Q9NXJ5 209 aa8.37□□□□□ -1.07
UBR4-207ENST00000425413 RNASE1P07998 156 aaKnown RBP8.37□□□□□ -1.07
UBR4-207ENST00000425413 RRN3P1Q2M238 152 aa8.37□□□□□ -1.07
UBR4-207ENST00000425413 SPXQ9BT56 116 aa8.37□□□□□ -1.07
UBR4-207ENST00000425413 LOC107984156A0A0G2JMH3 177 aa8.36□□□□□ -1.07
UBR4-207ENST00000425413 ARL17AQ8IVW1 177 aa8.36□□□□□ -1.07
UBR4-207ENST00000425413 LINC01549A6NIU2 74 aa8.36□□□□□ -1.07
UBR4-207ENST00000425413 ETDBQ3ZM63 59 aa8.36□□□□□ -1.07
UBR4-207ENST00000425413 J3QQQ9 107 aa8.35□□□□□ -1.07
UBR4-207ENST00000425413 LGALS3P17931 250 aaKnown RBP8.35□□□□□ -1.07
UBR4-207ENST00000425413 PAPPA-AS1Q5QFB9 102 aa8.35□□□□□ -1.07
UBR4-207ENST00000425413 NOP10Q9NPE3 64 aaKnown RBP8.35□□□□□ -1.07
UBR4-207ENST00000425413 LINC00467Q9BRT7 94 aa8.35□□□□□ -1.07
UBR4-207ENST00000425413 ATRQ13535 2644 aa8.34□□□□□ -1.07
UBR4-207ENST00000425413 TRAV8-3A0A0A6YYJ7 113 aa8.34□□□□□ -1.07
UBR4-207ENST00000425413 A8MZ25 164 aa8.34□□□□□ -1.07
UBR4-207ENST00000425413 ZNF22P17026 224 aaPredicted RBP8.34□□□□□ -1.07
UBR4-207ENST00000425413 TENM1Q9UKZ4 2725 aa8.34□□□□□ -1.07
UBR4-207ENST00000425413 TRAV25A0A0B4J276 109 aa8.34□□□□□ -1.08
UBR4-207ENST00000425413 GAGE13Q4V321 117 aa8.34□□□□□ -1.08
UBR4-207ENST00000425413 FAM104AQ969W3 186 aa8.34□□□□□ -1.08
UBR4-207ENST00000425413 A0A0J9YY99 117 aa8.33□□□□□ -1.08
UBR4-207ENST00000425413 Q6ZUT4 128 aa8.33□□□□□ -1.08
UBR4-207ENST00000425413 CHCHD7Q9BUK0 85 aa8.33□□□□□ -1.08
UBR4-207ENST00000425413 TMEM238LA0A1B0GVL6 79 aa8.33□□□□□ -1.08
UBR4-207ENST00000425413 A6NJY4 79 aa8.33□□□□□ -1.08
UBR4-207ENST00000425413 RHODO00212 210 aa8.33□□□□□ -1.08
UBR4-207ENST00000425413 PSMB2P49721 201 aa8.33□□□□□ -1.08
UBR4-207ENST00000425413 HILS1P60008 231 aa8.33□□□□□ -1.08
UBR4-207ENST00000425413 GAGE7O76087 117 aa8.32□□□□□ -1.08
UBR4-207ENST00000425413 GAGE12FP0CL80 117 aa8.32□□□□□ -1.08
UBR4-207ENST00000425413 GAGE12GP0CL81 117 aa8.32□□□□□ -1.08
UBR4-207ENST00000425413 GAGE12IP0CL82 117 aa8.32□□□□□ -1.08
UBR4-207ENST00000425413 A0A1B0GWB2 263 aa8.32□□□□□ -1.08
UBR4-207ENST00000425413 F8W1H4 67 aa8.32□□□□□ -1.08
UBR4-207ENST00000425413 RS1O15537 224 aa8.32□□□□□ -1.08
UBR4-207ENST00000425413 GIG44P09565 113 aaPredicted RBP8.32□□□□□ -1.08
UBR4-207ENST00000425413 TMEM223A0PJW6 202 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 GAGE12JA6NER3 117 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 LY6G6DO95868 133 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 GAGE4Q13068 117 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 GAGE5Q13069 117 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 BEAN1Q3B7T3 259 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 NFE4Q86UQ8 179 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 FLNBO75369 2602 aaKnown RBP8.31□□□□□ -1.08
UBR4-207ENST00000425413 KRTAP10-3P60369 221 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 DGAT2L7PQ6IED9 249 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 C16orf95Q9H693 158 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
UBR4-207ENST00000425413 NSD1Q96L73 2696 aaPredicted RBP8.31□□□□□ -1.08
UBR4-207ENST00000425413 TRGV2A0A075B6R0 118 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 NDUFA7O95182 113 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 SPINK8P0C7L1 97 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 AMELXQ99217 191 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 GTSF1LQ9H1H1 148 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 UBE2D4Q9Y2X8 147 aa8.31□□□□□ -1.08
UBR4-207ENST00000425413 HIVEP1P15822 2718 aa8.3□□□□□ -1.08
UBR4-207ENST00000425413 H7C2G1 150 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms