RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 BTF3L4Q96K17 158 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 KIF25-AS1Q9Y6Z4 181 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 IGLV4-60A0A075B6I1 120 aa7.77□□□□□ -1.17
HLA-DQB3-203ENST00000425319 IGKV2-24A0A0C4DH68 120 aa7.77□□□□□ -1.17
HLA-DQB3-203ENST00000425319 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
HLA-DQB3-203ENST00000425319 IFNA1P01562 189 aa7.77□□□□□ -1.17
HLA-DQB3-203ENST00000425319 CHTF8P0CG12 524 aa7.77□□□□□ -1.17
HLA-DQB3-203ENST00000425319 LYPD6BQ8NI32 183 aa7.77□□□□□ -1.17
HLA-DQB3-203ENST00000425319 A0A1B0GV50 99 aa7.76□□□□□ -1.17
HLA-DQB3-203ENST00000425319 RPL35P42766 123 aaKnown RBP7.76□□□□□ -1.17
HLA-DQB3-203ENST00000425319 RNASEKQ6P5S7 137 aaKnown RBP7.76□□□□□ -1.17
HLA-DQB3-203ENST00000425319 SMIM12Q96EX1 92 aa7.76□□□□□ -1.17
HLA-DQB3-203ENST00000425319 TMEM101Q96IK0 257 aa7.76□□□□□ -1.17
HLA-DQB3-203ENST00000425319 MANBALQ9NQG1 85 aa7.76□□□□□ -1.17
HLA-DQB3-203ENST00000425319 KANTRA0A1W2PQU2 76 aa7.75□□□□□ -1.17
HLA-DQB3-203ENST00000425319 H7C423 109 aa7.75□□□□□ -1.17
HLA-DQB3-203ENST00000425319 TEX261Q6UWH6 196 aa7.75□□□□□ -1.17
HLA-DQB3-203ENST00000425319 NCR2O95944 276 aa7.74□□□□□ -1.17
HLA-DQB3-203ENST00000425319 NTF3P20783 257 aa7.74□□□□□ -1.17
HLA-DQB3-203ENST00000425319 GNG4P50150 75 aa7.74□□□□□ -1.17
HLA-DQB3-203ENST00000425319 TWIST1Q15672 202 aa7.74□□□□□ -1.17
HLA-DQB3-203ENST00000425319 HIGD2BQ4VC39 106 aa7.74□□□□□ -1.17
HLA-DQB3-203ENST00000425319 Q6ZNX1 250 aa7.74□□□□□ -1.17
HLA-DQB3-203ENST00000425319 Q6ZRP5 223 aa7.74□□□□□ -1.17
HLA-DQB3-203ENST00000425319 PRSS3P2Q8NHM4 247 aa7.74□□□□□ -1.17
HLA-DQB3-203ENST00000425319 A0A0J9YXV3 536 aa7.73□□□□□ -1.17
HLA-DQB3-203ENST00000425319 ZNF561-AS1K7EIQ3 104 aa7.73□□□□□ -1.17
HLA-DQB3-203ENST00000425319 SLPIP03973 132 aa7.73□□□□□ -1.17
HLA-DQB3-203ENST00000425319 IGLC6P0CF74 106 aa7.73□□□□□ -1.17
HLA-DQB3-203ENST00000425319 ODF1Q14990 250 aa7.73□□□□□ -1.17
HLA-DQB3-203ENST00000425319 EIF5AL1Q6IS14 154 aaKnown RBP7.73□□□□□ -1.17
HLA-DQB3-203ENST00000425319 LYZL1Q6UWQ5 148 aa7.73□□□□□ -1.17
HLA-DQB3-203ENST00000425319 CHCHD10Q8WYQ3 142 aaPredicted RBP7.73□□□□□ -1.17
HLA-DQB3-203ENST00000425319 ISOC2Q96AB3 205 aa7.73□□□□□ -1.17
HLA-DQB3-203ENST00000425319 CYTL1Q9NRR1 136 aa7.73□□□□□ -1.17
HLA-DQB3-203ENST00000425319 HMCN2Q8NDA2 5059 aa7.72□□□□□ -1.17
HLA-DQB3-203ENST00000425319 APCSP02743 223 aa7.72□□□□□ -1.17
HLA-DQB3-203ENST00000425319 PRR3P79522 188 aaKnown RBP7.72□□□□□ -1.17
HLA-DQB3-203ENST00000425319 SS18Q15532 418 aa7.72□□□□□ -1.17
HLA-DQB3-203ENST00000425319 FAM210AQ96ND0 272 aa7.72□□□□□ -1.17
HLA-DQB3-203ENST00000425319 GNG13Q9P2W3 67 aa7.72□□□□□ -1.17
HLA-DQB3-203ENST00000425319 IGHV1-58A0A0C4DH39 117 aa7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 FAM231BA6NCW3 169 aa7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 PDE6DO43924 150 aa7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 ZNF25P17030 456 aaPredicted RBP7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 PMCHP20382 165 aa7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 CCL20P78556 96 aa7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 SMAGPQ0VAQ4 97 aa7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 ZNF345Q14585 488 aa7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 CENPWQ5EE01 88 aa7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 MED9Q9NWA0 146 aa7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.18
HLA-DQB3-203ENST00000425319 GVQW2A0A096LPI5 108 aaPredicted RBP7.7□□□□□ -1.18
HLA-DQB3-203ENST00000425319 A0A1B0GVG6 124 aa7.7□□□□□ -1.18
HLA-DQB3-203ENST00000425319 C9orf62Q8N4C0 152 aa7.7□□□□□ -1.18
HLA-DQB3-203ENST00000425319 C15orf56Q8N910 161 aa7.7□□□□□ -1.18
HLA-DQB3-203ENST00000425319 GFRA4Q9GZZ7 299 aa7.7□□□□□ -1.18
HLA-DQB3-203ENST00000425319 LRP1Q07954 4544 aaKnown RBP7.7□□□□□ -1.18
HLA-DQB3-203ENST00000425319 hCG_2014768A0A024R1R8 64 aa7.69□□□□□ -1.18
HLA-DQB3-203ENST00000425319 MALP21145 153 aa7.69□□□□□ -1.18
HLA-DQB3-203ENST00000425319 OR5A1Q8NGJ0 315 aa7.69□□□□□ -1.18
HLA-DQB3-203ENST00000425319 C11orf52Q96A22 123 aa7.69□□□□□ -1.18
HLA-DQB3-203ENST00000425319 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
HLA-DQB3-203ENST00000425319 CARD19Q96LW7 228 aa7.69□□□□□ -1.18
HLA-DQB3-203ENST00000425319 C19orf71A6NCJ1 209 aa7.68□□□□□ -1.18
HLA-DQB3-203ENST00000425319 FGF6P10767 208 aa7.68□□□□□ -1.18
HLA-DQB3-203ENST00000425319 TAGLN2P37802 199 aaKnown RBP7.68□□□□□ -1.18
HLA-DQB3-203ENST00000425319 A0A096LNI7 61 aa7.67□□□□□ -1.18
HLA-DQB3-203ENST00000425319 RAB19A4D1S5 217 aa7.67□□□□□ -1.18
HLA-DQB3-203ENST00000425319 HMSDA8MTL9 139 aa7.67□□□□□ -1.18
HLA-DQB3-203ENST00000425319 I3L3M4 83 aa7.67□□□□□ -1.18
HLA-DQB3-203ENST00000425319 XCL1P47992 114 aa7.67□□□□□ -1.18
HLA-DQB3-203ENST00000425319 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
HLA-DQB3-203ENST00000425319 SYCNQ0VAF6 134 aa7.67□□□□□ -1.18
HLA-DQB3-203ENST00000425319 FAT3Q8TDW7 4589 aa7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 TRAV1-1A0A0B4J248 108 aa7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 LOC107984640A0A0U1RRK4 108 aa7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 IGKV2-29A2NJV5 120 aaPredicted RBP7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 CCL25O15444 150 aa7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 BCL2L11O43521 198 aa7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 MEF2BQ02080 365 aaPredicted RBP7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 ZNF664Q8N3J9 261 aa7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 GATD1Q8NB37 220 aa7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 NUDT10Q8NFP7 164 aa7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 NUDT11Q96G61 164 aa7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 PKHD1L1Q86WI1 4243 aa7.66□□□□□ -1.18
HLA-DQB3-203ENST00000425319 LINC00959A0A1B0GUT2 108 aa7.65□□□□□ -1.18
HLA-DQB3-203ENST00000425319 SDHAF1A6NFY7 115 aa7.65□□□□□ -1.18
HLA-DQB3-203ENST00000425319 MT-ND6P03923 174 aa7.65□□□□□ -1.18
HLA-DQB3-203ENST00000425319 FOXI1Q12951 378 aa7.65□□□□□ -1.18
HLA-DQB3-203ENST00000425319 GAGE2BQ13066 116 aa7.65□□□□□ -1.18
HLA-DQB3-203ENST00000425319 TSKUQ8WUA8 353 aa7.65□□□□□ -1.18
HLA-DQB3-203ENST00000425319 MRAP2Q96G30 205 aa7.65□□□□□ -1.18
HLA-DQB3-203ENST00000425319 G3V3Q6 166 aa7.64□□□□□ -1.19
HLA-DQB3-203ENST00000425319 APOMO95445 188 aa7.64□□□□□ -1.19
HLA-DQB3-203ENST00000425319 SRSF9Q13242 221 aaKnown RBP eCLIP7.64□□□□□ -1.19
HLA-DQB3-203ENST00000425319 CD164L2Q6UWJ8 174 aa7.64□□□□□ -1.19
HLA-DQB3-203ENST00000425319 RPP21Q9H633 154 aaKnown RBP7.64□□□□□ -1.19
HLA-DQB3-203ENST00000425319 ST20Q9HBF5 79 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms