RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 PHOX2AO14813 284 aa11.55□□□□□ -0.56
FOXN4-203ENST00000423960 HLA-DQA1P01909 254 aa11.55□□□□□ -0.56
FOXN4-203ENST00000423960 NIT1Q86X76 327 aa11.55□□□□□ -0.56
FOXN4-203ENST00000423960 CHCHD5Q9BSY4 110 aa11.55□□□□□ -0.56
FOXN4-203ENST00000423960 TRBV27A0A0K0K1C4 114 aa11.54□□□□□ -0.56
FOXN4-203ENST00000423960 NPYP01303 97 aa11.54□□□□□ -0.56
FOXN4-203ENST00000423960 IGHV3-30P01768 117 aa11.54□□□□□ -0.56
FOXN4-203ENST00000423960 IGHV3-33P01772 117 aa11.54□□□□□ -0.56
FOXN4-203ENST00000423960 IGHV3-30-3P0DP02 117 aa11.54□□□□□ -0.56
FOXN4-203ENST00000423960 IGHV3-30-5P0DP03 117 aa11.54□□□□□ -0.56
FOXN4-203ENST00000423960 YPEL4Q96NS1 127 aa11.54□□□□□ -0.56
FOXN4-203ENST00000423960 MT-ND6P03923 174 aa11.53□□□□□ -0.56
FOXN4-203ENST00000423960 AMTP48728 403 aa11.53□□□□□ -0.56
FOXN4-203ENST00000423960 RPL32P62910 135 aaKnown RBP11.53□□□□□ -0.56
FOXN4-203ENST00000423960 CBLN2Q8IUK8 224 aa11.53□□□□□ -0.56
FOXN4-203ENST00000423960 TMEM243Q9BU79 118 aa11.53□□□□□ -0.56
FOXN4-203ENST00000423960 KRTAP1-5Q9BYS1 174 aa11.53□□□□□ -0.56
FOXN4-203ENST00000423960 LAMTOR2Q9Y2Q5 125 aa11.53□□□□□ -0.56
FOXN4-203ENST00000423960 DNAH2Q9P225 4427 aa11.52□□□□□ -0.56
FOXN4-203ENST00000423960 A0A087WX48 190 aa11.52□□□□□ -0.57
FOXN4-203ENST00000423960 PKIAP61925 76 aa11.52□□□□□ -0.57
FOXN4-203ENST00000423960 KIAA1644Q3SXP7 199 aa11.52□□□□□ -0.57
FOXN4-203ENST00000423960 C10orf126Q8N4M7 172 aa11.52□□□□□ -0.57
FOXN4-203ENST00000423960 KIR2DL4Q99706 377 aa11.52□□□□□ -0.57
FOXN4-203ENST00000423960 TSHBP01222 138 aa11.51□□□□□ -0.57
FOXN4-203ENST00000423960 FABP9Q0Z7S8 132 aa11.51□□□□□ -0.57
FOXN4-203ENST00000423960 GAGE6Q13070 117 aa11.51□□□□□ -0.57
FOXN4-203ENST00000423960 Q8N3U1 123 aa11.51□□□□□ -0.57
FOXN4-203ENST00000423960 CHCHD7Q9BUK0 85 aa11.51□□□□□ -0.57
FOXN4-203ENST00000423960 MRPL18Q9H0U6 180 aaKnown RBP11.51□□□□□ -0.57
FOXN4-203ENST00000423960 FCER1GP30273 86 aa11.5□□□□□ -0.57
FOXN4-203ENST00000423960 C1orf134Q5TEV5 83 aa11.5□□□□□ -0.57
FOXN4-203ENST00000423960 SMIM2Q9BVW6 85 aa11.5□□□□□ -0.57
FOXN4-203ENST00000423960 TRAPPC1Q9Y5R8 145 aa11.5□□□□□ -0.57
FOXN4-203ENST00000423960 PRSS47A8MTI9 375 aa11.49□□□□□ -0.57
FOXN4-203ENST00000423960 IBA57-AS1B1ANH7 110 aa11.49□□□□□ -0.57
FOXN4-203ENST00000423960 UBE2L6O14933 153 aa11.49□□□□□ -0.57
FOXN4-203ENST00000423960 BTF3P20290 206 aaKnown RBP11.49□□□□□ -0.57
FOXN4-203ENST00000423960 C6orf223Q8N319 242 aa11.49□□□□□ -0.57
FOXN4-203ENST00000423960 MAP1LC3AQ9H492 121 aa11.49□□□□□ -0.57
FOXN4-203ENST00000423960 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
FOXN4-203ENST00000423960 TCAPO15273 167 aa11.48□□□□□ -0.57
FOXN4-203ENST00000423960 MPV17L2Q567V2 206 aa11.48□□□□□ -0.57
FOXN4-203ENST00000423960 H7C423 109 aa11.47□□□□□ -0.57
FOXN4-203ENST00000423960 ESDP10768 282 aa11.47□□□□□ -0.57
FOXN4-203ENST00000423960 RBX1P62877 108 aa11.47□□□□□ -0.57
FOXN4-203ENST00000423960 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.46□□□□□ -0.57
FOXN4-203ENST00000423960 IGKV2-29A2NJV5 120 aaPredicted RBP11.46□□□□□ -0.57
FOXN4-203ENST00000423960 Q8N976 141 aa11.46□□□□□ -0.57
FOXN4-203ENST00000423960 ALKBH7Q9BT30 221 aaPredicted RBP11.46□□□□□ -0.57
FOXN4-203ENST00000423960 KLK12Q9UKR0 248 aa11.46□□□□□ -0.57
FOXN4-203ENST00000423960 A0A1B0GUV1 79 aa11.45□□□□□ -0.58
FOXN4-203ENST00000423960 RAB5AP20339 215 aa11.45□□□□□ -0.58
FOXN4-203ENST00000423960 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
FOXN4-203ENST00000423960 Q8N8P6 123 aa11.45□□□□□ -0.58
FOXN4-203ENST00000423960 HECTD4Q9Y4D8 3996 aa11.44□□□□□ -0.58
FOXN4-203ENST00000423960 SCO1O75880 301 aa11.44□□□□□ -0.58
FOXN4-203ENST00000423960 ANGP03950 147 aaKnown RBP11.44□□□□□ -0.58
FOXN4-203ENST00000423960 S100A1P23297 94 aa11.44□□□□□ -0.58
FOXN4-203ENST00000423960 LAGE3Q14657 143 aa11.44□□□□□ -0.58
FOXN4-203ENST00000423960 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
FOXN4-203ENST00000423960 RTL8CO15255 209 aa11.43□□□□□ -0.58
FOXN4-203ENST00000423960 Q9HAA7 133 aa11.43□□□□□ -0.58
FOXN4-203ENST00000423960 NXT2Q9NPJ8 142 aaKnown RBP11.43□□□□□ -0.58
FOXN4-203ENST00000423960 DNAH17Q9UFH2 4485 aa11.43□□□□□ -0.58
FOXN4-203ENST00000423960 IGLV4-60A0A075B6I1 120 aa11.42□□□□□ -0.58
FOXN4-203ENST00000423960 TRAV8-3A0A0A6YYJ7 113 aa11.42□□□□□ -0.58
FOXN4-203ENST00000423960 COLCA2A8K830 154 aa11.42□□□□□ -0.58
FOXN4-203ENST00000423960 FGF6P10767 208 aa11.42□□□□□ -0.58
FOXN4-203ENST00000423960 IFI27P40305 119 aaPredicted RBP11.42□□□□□ -0.58
FOXN4-203ENST00000423960 RNASEKQ6P5S7 137 aaKnown RBP11.42□□□□□ -0.58
FOXN4-203ENST00000423960 UBE2WQ96B02 151 aa11.42□□□□□ -0.58
FOXN4-203ENST00000423960 TMEM18Q96B42 140 aa11.42□□□□□ -0.58
FOXN4-203ENST00000423960 ATP6V1G1O75348 118 aa11.41□□□□□ -0.58
FOXN4-203ENST00000423960 LINC00269Q8N2A0 174 aa11.41□□□□□ -0.58
FOXN4-203ENST00000423960 C20orf203Q8NBC4 194 aa11.41□□□□□ -0.58
FOXN4-203ENST00000423960 PRSS3P2Q8NHM4 247 aa11.41□□□□□ -0.58
FOXN4-203ENST00000423960 K7EMI3 77 aa11.4□□□□□ -0.58
FOXN4-203ENST00000423960 ZNF25P17030 456 aaPredicted RBP11.4□□□□□ -0.58
FOXN4-203ENST00000423960 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.58
FOXN4-203ENST00000423960 Q0VG73 95 aa11.4□□□□□ -0.58
FOXN4-203ENST00000423960 ENHOQ6UWT2 76 aa11.4□□□□□ -0.58
FOXN4-203ENST00000423960 LINC00336Q6ZUF6 198 aa11.4□□□□□ -0.58
FOXN4-203ENST00000423960 MRPL52Q86TS9 123 aaKnown RBP11.4□□□□□ -0.58
FOXN4-203ENST00000423960 TMEM101Q96IK0 257 aa11.4□□□□□ -0.58
FOXN4-203ENST00000423960 FAT2Q9NYQ8 4349 aa11.4□□□□□ -0.58
FOXN4-203ENST00000423960 CRPP02741 224 aa11.39□□□□□ -0.59
FOXN4-203ENST00000423960 ORMDL2Q53FV1 153 aa11.39□□□□□ -0.59
FOXN4-203ENST00000423960 Q6ZRN7 208 aaPredicted RBP11.39□□□□□ -0.59
FOXN4-203ENST00000423960 PRR34Q9NV39 138 aa11.39□□□□□ -0.59
FOXN4-203ENST00000423960 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
FOXN4-203ENST00000423960 OR5A1Q8NGJ0 315 aa11.38□□□□□ -0.59
FOXN4-203ENST00000423960 TM2D2Q9BX73 214 aa11.38□□□□□ -0.59
FOXN4-203ENST00000423960 PRSS29PA6NIE9 313 aa11.37□□□□□ -0.59
FOXN4-203ENST00000423960 TRGC2P03986 189 aa11.37□□□□□ -0.59
FOXN4-203ENST00000423960 RPL39P62891 51 aaKnown RBP11.37□□□□□ -0.59
FOXN4-203ENST00000423960 REG3AQ06141 175 aa11.37□□□□□ -0.59
FOXN4-203ENST00000423960 CLPSL2Q6UWE3 100 aa11.37□□□□□ -0.59
FOXN4-203ENST00000423960 RMI2Q96E14 147 aa11.37□□□□□ -0.59
FOXN4-203ENST00000423960 UBE2D4Q9Y2X8 147 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms