RNA–Protein interactions for RNA: ENST00000423692.5

SRRT-201, Transcript of serrate, RNA effector molecule, humanhuman

TSL 5

Gene SRRT, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-201ENST00000423692 HMCN2Q8NDA2 5059 aa9.48□□□□□ -0.89
SRRT-201ENST00000423692 IGLV4-60A0A075B6I1 120 aa9.48□□□□□ -0.89
SRRT-201ENST00000423692 SDIM1Q6ZPB5 146 aa9.48□□□□□ -0.89
SRRT-201ENST00000423692 K7EN84 100 aa9.47□□□□□ -0.89
SRRT-201ENST00000423692 CNBPP62633 177 aaKnown RBP9.47□□□□□ -0.89
SRRT-201ENST00000423692 GFRA4Q9GZZ7 299 aa9.47□□□□□ -0.89
SRRT-201ENST00000423692 RPP21Q9H633 154 aaKnown RBP9.47□□□□□ -0.89
SRRT-201ENST00000423692 IGLV10-54A0A075B6I4 117 aa9.46□□□□□ -0.9
SRRT-201ENST00000423692 OXTP01178 125 aa9.46□□□□□ -0.9
SRRT-201ENST00000423692 GATD1Q8NB37 220 aa9.46□□□□□ -0.9
SRRT-201ENST00000423692 OCC1Q8TAD7 63 aa9.46□□□□□ -0.9
SRRT-201ENST00000423692 RNASE7Q9H1E1 156 aaKnown RBP9.46□□□□□ -0.9
SRRT-201ENST00000423692 COTL1Q14019 142 aa9.45□□□□□ -0.9
SRRT-201ENST00000423692 TWIST1Q15672 202 aa9.45□□□□□ -0.9
SRRT-201ENST00000423692 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.45□□□□□ -0.9
SRRT-201ENST00000423692 PANO1I0J062 215 aa9.44□□□□□ -0.9
SRRT-201ENST00000423692 AMTP48728 403 aa9.44□□□□□ -0.9
SRRT-201ENST00000423692 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
SRRT-201ENST00000423692 GTSF1Q8WW33 167 aa9.44□□□□□ -0.9
SRRT-201ENST00000423692 TMEM250H0YL14 139 aa9.43□□□□□ -0.9
SRRT-201ENST00000423692 UBE2L6O14933 153 aa9.43□□□□□ -0.9
SRRT-201ENST00000423692 RPL37AP61513 92 aaKnown RBP9.43□□□□□ -0.9
SRRT-201ENST00000423692 Q6ZNX1 250 aa9.43□□□□□ -0.9
SRRT-201ENST00000423692 TRAV26-2A0A0B4J265 109 aa9.42□□□□□ -0.9
SRRT-201ENST00000423692 hDV102S1A0JD36 115 aa9.42□□□□□ -0.9
SRRT-201ENST00000423692 NCR2O95944 276 aa9.42□□□□□ -0.9
SRRT-201ENST00000423692 SLPIP03973 132 aa9.42□□□□□ -0.9
SRRT-201ENST00000423692 FAM231DQ6ZW35 169 aa9.42□□□□□ -0.9
SRRT-201ENST00000423692 LYPD6BQ8NI32 183 aa9.42□□□□□ -0.9
SRRT-201ENST00000423692 FOXA3P55318 350 aaPredicted RBP9.41□□□□□ -0.9
SRRT-201ENST00000423692 BLOC1S1P78537 153 aa9.41□□□□□ -0.9
SRRT-201ENST00000423692 TEX261Q6UWH6 196 aa9.41□□□□□ -0.9
SRRT-201ENST00000423692 IGHV3-64A0A075B6Q5 118 aa9.4□□□□□ -0.9
SRRT-201ENST00000423692 H7C423 109 aa9.4□□□□□ -0.9
SRRT-201ENST00000423692 SMIM15Q7Z3B0 74 aa9.4□□□□□ -0.9
SRRT-201ENST00000423692 RPL39LQ96EH5 51 aaKnown RBP9.4□□□□□ -0.9
SRRT-201ENST00000423692 AP5S1Q9NUS5 200 aa9.4□□□□□ -0.9
SRRT-201ENST00000423692 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.39□□□□□ -0.91
SRRT-201ENST00000423692 A8MWL6 223 aa9.39□□□□□ -0.91
SRRT-201ENST00000423692 GATCO43716 136 aaKnown RBP9.39□□□□□ -0.91
SRRT-201ENST00000423692 HNRNPA3P51991 378 aaKnown RBP9.39□□□□□ -0.91
SRRT-201ENST00000423692 CT83Q5H943 113 aa9.39□□□□□ -0.91
SRRT-201ENST00000423692 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
SRRT-201ENST00000423692 RNF185Q96GF1 192 aa9.39□□□□□ -0.91
SRRT-201ENST00000423692 TRBV6-5A0A0K0K1A5 114 aa9.38□□□□□ -0.91
SRRT-201ENST00000423692 GAGE12HA6NDE8 117 aa9.38□□□□□ -0.91
SRRT-201ENST00000423692 NDUFS6O75380 124 aaKnown RBP9.38□□□□□ -0.91
SRRT-201ENST00000423692 SERTAD4-AS1Q5TG53 156 aa9.38□□□□□ -0.91
SRRT-201ENST00000423692 CFAP161Q6P656 301 aa9.38□□□□□ -0.91
SRRT-201ENST00000423692 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
SRRT-201ENST00000423692 AKAP14Q86UN6 197 aa9.38□□□□□ -0.91
SRRT-201ENST00000423692 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
SRRT-201ENST00000423692 FAM210AQ96ND0 272 aa9.37□□□□□ -0.91
SRRT-201ENST00000423692 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
SRRT-201ENST00000423692 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
SRRT-201ENST00000423692 FAM231BA6NCW3 169 aa9.36□□□□□ -0.91
SRRT-201ENST00000423692 APCSP02743 223 aa9.36□□□□□ -0.91
SRRT-201ENST00000423692 FGF6P10767 208 aa9.36□□□□□ -0.91
SRRT-201ENST00000423692 AMMECR1LQ6DCA0 310 aa9.36□□□□□ -0.91
SRRT-201ENST00000423692 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
SRRT-201ENST00000423692 A0A087WYN8 130 aa9.35□□□□□ -0.91
SRRT-201ENST00000423692 I3L3M4 83 aa9.35□□□□□ -0.91
SRRT-201ENST00000423692 ZNF25P17030 456 aaPredicted RBP9.35□□□□□ -0.91
SRRT-201ENST00000423692 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
SRRT-201ENST00000423692 PLAC8Q9NZF1 115 aa9.35□□□□□ -0.91
SRRT-201ENST00000423692 CHTF8P0CG12 524 aa9.34□□□□□ -0.91
SRRT-201ENST00000423692 ESDP10768 282 aa9.34□□□□□ -0.91
SRRT-201ENST00000423692 RPS10P46783 165 aaKnown RBP9.34□□□□□ -0.91
SRRT-201ENST00000423692 RNASEKQ6P5S7 137 aaKnown RBP9.34□□□□□ -0.91
SRRT-201ENST00000423692 LINC01551Q86U37 167 aa9.34□□□□□ -0.91
SRRT-201ENST00000423692 TSKUQ8WUA8 353 aa9.34□□□□□ -0.91
SRRT-201ENST00000423692 TMEM191AQ9H0A3 160 aa9.34□□□□□ -0.91
SRRT-201ENST00000423692 GVQW2A0A096LPI5 108 aaPredicted RBP9.33□□□□□ -0.92
SRRT-201ENST00000423692 IGKV3OR2-268A0A0C4DH90 116 aa9.33□□□□□ -0.92
SRRT-201ENST00000423692 GAS8-AS1O95177 125 aa9.33□□□□□ -0.92
SRRT-201ENST00000423692 TSHBP01222 138 aa9.33□□□□□ -0.92
SRRT-201ENST00000423692 PMCHP20382 165 aa9.33□□□□□ -0.92
SRRT-201ENST00000423692 FOXI1Q12951 378 aa9.33□□□□□ -0.92
SRRT-201ENST00000423692 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
SRRT-201ENST00000423692 OSTCQ9NRP0 149 aa9.33□□□□□ -0.92
SRRT-201ENST00000423692 A0A1B0GUT8 65 aa9.32□□□□□ -0.92
SRRT-201ENST00000423692 CEBPGP53567 150 aa9.32□□□□□ -0.92
SRRT-201ENST00000423692 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
SRRT-201ENST00000423692 Q6ZRU5 148 aa9.32□□□□□ -0.92
SRRT-201ENST00000423692 BORCS7Q96B45 105 aa9.32□□□□□ -0.92
SRRT-201ENST00000423692 SMIM7Q9BQ49 75 aa9.32□□□□□ -0.92
SRRT-201ENST00000423692 ST20Q9HBF5 79 aa9.32□□□□□ -0.92
SRRT-201ENST00000423692 TRBV27A0A0K0K1C4 114 aa9.31□□□□□ -0.92
SRRT-201ENST00000423692 HIGD1CA8MV81 97 aa9.31□□□□□ -0.92
SRRT-201ENST00000423692 RAB4AP20338 218 aa9.31□□□□□ -0.92
SRRT-201ENST00000423692 COX6A2Q02221 97 aa9.31□□□□□ -0.92
SRRT-201ENST00000423692 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
SRRT-201ENST00000423692 MRPL52Q86TS9 123 aaKnown RBP9.31□□□□□ -0.92
SRRT-201ENST00000423692 DPH3Q96FX2 82 aa9.31□□□□□ -0.92
SRRT-201ENST00000423692 TMEM101Q96IK0 257 aa9.31□□□□□ -0.92
SRRT-201ENST00000423692 EIF5A2Q9GZV4 153 aaKnown RBP9.31□□□□□ -0.92
SRRT-201ENST00000423692 UBR4Q5T4S7 5183 aa9.3□□□□□ -0.92
SRRT-201ENST00000423692 LINC00959A0A1B0GUT2 108 aa9.3□□□□□ -0.92
SRRT-201ENST00000423692 ZNF727A8MUV8 499 aa9.3□□□□□ -0.92
SRRT-201ENST00000423692 SRP19P09132 144 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms