RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 CRIP1P50238 77 aa3.81□□□□□ -1.8
LINC00458-201ENST00000423442 RPS20P60866 119 aaKnown RBP3.81□□□□□ -1.8
LINC00458-201ENST00000423442 SSTP61278 116 aa3.81□□□□□ -1.8
LINC00458-201ENST00000423442 CCL20P78556 96 aa3.81□□□□□ -1.8
LINC00458-201ENST00000423442 MEF2BQ02080 365 aaPredicted RBP3.81□□□□□ -1.8
LINC00458-201ENST00000423442 SFRP2Q96HF1 295 aa3.81□□□□□ -1.8
LINC00458-201ENST00000423442 VAX2Q9UIW0 290 aa3.81□□□□□ -1.8
LINC00458-201ENST00000423442 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
LINC00458-201ENST00000423442 VPS13BQ7Z7G8 4022 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 LOC100131303A0A0U1RQF7 123 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 EPM2AB3EWF7 344 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 F2Z2F3 143 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 P01737 135 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 DNAH10OSP0CZ25 163 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 LINC00315P59091 139 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 RAB4BP61018 213 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 GAGE1Q13065 139 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 GAGE4Q13068 117 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 GAGE5Q13069 117 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 ELOBQ15370 118 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 ZNF56Q15929 161 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 LELP1Q5T871 98 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 CD164L2Q6UWJ8 174 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 SPATA12Q7Z6I5 190 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 PARLQ9H300 379 aa3.8□□□□□ -1.8
LINC00458-201ENST00000423442 A0A087WX48 190 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 TRAV8-3A0A0A6YYJ7 113 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 TRBV10-1A0A0K0K1A3 114 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 RBFOX3A6NFN3 312 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 TMEM262E9PQX1 116 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 H7C1H1 209 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 IGHV3-30P01768 117 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 IGHV3-33P01772 117 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 OR5AL1P0C617 328 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 IGHV3-30-3P0DP02 117 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 IGHV3-30-5P0DP03 117 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 CACNG7P62955 275 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 WFDC10BQ8IUB3 73 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 OR2D3Q8NGH3 330 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 RMI2Q96E14 147 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 SMIM12Q96EX1 92 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 SAMD10Q9BYL1 202 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 EIF5A2Q9GZV4 153 aaKnown RBP3.79□□□□□ -1.8
LINC00458-201ENST00000423442 JPT2Q9H910 190 aa3.79□□□□□ -1.8
LINC00458-201ENST00000423442 SRRM2Q9UQ35 2752 aaKnown RBP3.78□□□□□ -1.8
LINC00458-201ENST00000423442 TRBV7-3A0A075B6L6 115 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 RAB19A4D1S5 217 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 IBA57-AS1B1ANH7 110 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 CXCL1P09341 107 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 BCL2P10415 239 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 CEBPGP53567 150 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 PKIAP61925 76 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 TMEM97Q5BJF2 176 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 CENPWQ5EE01 88 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 LINC01556Q5JQF7 62 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 ALKAL2Q6UX46 152 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 SMIM15Q7Z3B0 74 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 C14orf178Q8N769 122 aaPredicted RBP3.78□□□□□ -1.8
LINC00458-201ENST00000423442 FER1L6-AS1Q8NA97 138 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 VCX2Q9H322 139 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 Q9HAA7 133 aa3.78□□□□□ -1.8
LINC00458-201ENST00000423442 MUC21A0A0G2JKD1 596 aa3.77□□□□□ -1.81
LINC00458-201ENST00000423442 MUC21A0A140T8X8 626 aa3.77□□□□□ -1.81
LINC00458-201ENST00000423442 TRGC1P0CF51 173 aa3.77□□□□□ -1.81
LINC00458-201ENST00000423442 RPL19P84098 196 aaKnown RBP3.77□□□□□ -1.81
LINC00458-201ENST00000423442 DAZ4Q86SG3 579 aaKnown RBP3.77□□□□□ -1.81
LINC00458-201ENST00000423442 C11orf52Q96A22 123 aa3.77□□□□□ -1.81
LINC00458-201ENST00000423442 BORCS7Q96B45 105 aa3.77□□□□□ -1.81
LINC00458-201ENST00000423442 AP1S3Q96PC3 154 aa3.77□□□□□ -1.81
LINC00458-201ENST00000423442 DERL1Q9BUN8 251 aa3.77□□□□□ -1.81
LINC00458-201ENST00000423442 DAZ3Q9NR90 486 aaKnown RBP3.77□□□□□ -1.81
LINC00458-201ENST00000423442 A8MWL6 223 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 TMEM250H0YL14 139 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 SNAI2O43623 268 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 MGPP08493 103 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 NTF3P20783 257 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 Q0VG73 95 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 LAGE3Q14657 143 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 UFSP1Q6NVU6 142 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 LYZL1Q6UWQ5 148 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 C9orf62Q8N4C0 152 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 OR10AG1Q8NH19 301 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 LITAFQ99732 161 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 CHCHD5Q9BSY4 110 aa3.76□□□□□ -1.81
LINC00458-201ENST00000423442 TRBV25-1A0A075B6N4 114 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 A0A087WTM6 91 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 TRBV6-8A0A0A6YYG3 113 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 C19orf71A6NCJ1 209 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 GATCO43716 136 aaKnown RBP3.75□□□□□ -1.81
LINC00458-201ENST00000423442 ANGP03950 147 aaKnown RBP3.75□□□□□ -1.81
LINC00458-201ENST00000423442 GZMBP10144 247 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 TEX261Q6UWH6 196 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 C15orf54Q8N8G6 183 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 Q8N976 141 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 DNAJC30Q96LL9 226 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 CHCHD7Q9BUK0 85 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 RPP21Q9H633 154 aaKnown RBP3.75□□□□□ -1.81
LINC00458-201ENST00000423442 KLK12Q9UKR0 248 aa3.75□□□□□ -1.81
LINC00458-201ENST00000423442 FLG2Q5D862 2391 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms