RNA–Protein interactions for RNA: ENST00000423035.5

PGAP1-206, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 1 (best)

Gene PGAP1, Length 8,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-206ENST00000423035 E9PQ18 207 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 HMGA2P52926 109 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 C9orf139Q6ZV77 190 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 C2orf91Q6ZV80 131 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 CDC42SE1Q9NRR8 79 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 USF3Q68DE3 2245 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 PRAC2D3DTV9 90 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 CDIP1Q9H305 208 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 SPTY2D1-AS1A0A0U1RR47 76 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 C17orf100A8MU93 164 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 SPINK2P20155 84 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 TOMM7Q9P0U1 55 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 TLN1Q9Y490 2541 aaKnown RBP3.32□□□□□ -1.88
PGAP1-206ENST00000423035 IGLV3-32A0A0A0MS00 114 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 CTSGP08311 255 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 ELSPBP1Q96BH3 223 aa3.32□□□□□ -1.88
PGAP1-206ENST00000423035 XCL1P47992 114 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 CMC4P56277 68 aaPredicted RBP3.31□□□□□ -1.88
PGAP1-206ENST00000423035 NF1P21359 2839 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 TRBV10-1A0A0K0K1A3 114 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 COL8A2P25067 703 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 BBC3Q96PG8 261 aaPredicted RBP3.31□□□□□ -1.88
PGAP1-206ENST00000423035 USP9YO00507 2555 aaPredicted RBP3.31□□□□□ -1.88
PGAP1-206ENST00000423035 RPS11P62280 158 aaKnown RBP eCLIP3.31□□□□□ -1.88
PGAP1-206ENST00000423035 CEMP1Q6PRD7 247 aaPredicted RBP3.31□□□□□ -1.88
PGAP1-206ENST00000423035 C20orf203Q8NBC4 194 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 RNF7Q9UBF6 113 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 U3KQK5 164 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 IGKV4-1P06312 121 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 DEFB134Q4QY38 66 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 C17orf77Q96MU5 243 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 SPRY4Q9C004 299 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 IGLV1-44P01699 117 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 COL4A3Q01955 1670 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 Q6ZQY7 126 aa3.31□□□□□ -1.88
PGAP1-206ENST00000423035 FRYLO94915 3013 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 IGHV3-66A0A0C4DH42 116 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 DSCR9P59020 149 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 ELOF1P60002 83 aaKnown RBP3.3□□□□□ -1.88
PGAP1-206ENST00000423035 SSBP3-AS1Q7Z2R9 100 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 DCANP1Q8TF63 244 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 ARRDC1-AS1Q9H2J1 176 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 CENPEQ02224 2701 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 PATE3B3GLJ2 98 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 UBE2D2P62837 147 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 ENHOQ6UWT2 76 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 GPHB5Q86YW7 130 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 MIR7-3HGQ8N6C7 128 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 PRR3P79522 188 aaKnown RBP3.3□□□□□ -1.88
PGAP1-206ENST00000423035 PDE6HQ13956 83 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 FAM27BQ5VT28 67 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 USP34Q70CQ2 3546 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 CFAP126Q5VTH2 177 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 NUP210LQ5VU65 1888 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 A0A1B0GXF2 115 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 Q6P435 159 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 NDUFA11Q86Y39 141 aa3.3□□□□□ -1.88
PGAP1-206ENST00000423035 IGKV1D-42A0A075B6H8 117 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 TRBV5-4A0A0C4DH59 114 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 DMXL1Q9Y485 3027 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 IGKV2D-30A0A075B6S6 120 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 TRBV7-7A0A0K0K1E9 115 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 SMIM27A0A1W2PRY6 76 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 BUB1B-PAK6H3BSN5 160 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 RPL36A-HNRNPH2H7BZ11 118 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 H7C423 109 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 BPY2O14599 106 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 FOXS1O43638 330 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 TDRG1Q3Y452 100 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 Q6ZQT7 251 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 IGHV3-53P01767 116 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 FAM223AQ8IWN6 122 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 FBXL19-AS1Q494R0 122 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 C5orf56Q8N8D9 126 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 DIRC1Q969H9 104 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 C6orf223Q8N319 242 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 CFAP47Q6ZTR5 3102 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 COL4A4P53420 1690 aaPredicted RBP3.29□□□□□ -1.88
PGAP1-206ENST00000423035 FOXF1Q12946 379 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 SSC4DQ8WTU2 575 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 CCL26Q9Y258 94 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 LINC01548A6NM66 108 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 IGKV1D-33P01593 117 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 IGKV1-33P01594 117 aa3.29□□□□□ -1.88
PGAP1-206ENST00000423035 ZNF80P51504 273 aaPredicted RBP3.29□□□□□ -1.88
PGAP1-206ENST00000423035 M0R378 163 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 ROS1P08922 2347 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 TRBV25-1A0A075B6N4 114 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 A0A1B0GU69 56 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 GNRH2O43555 120 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 DEFB116Q30KQ4 102 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 ALKAL1Q6UXT8 129 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 IGHV3-33P01772 117 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 LYPD5Q6UWN5 251 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 C1orf134Q5TEV5 83 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 A0A087WVE0 104 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 TRAV40A0A0B4J280 105 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 IGKV1-5P01602 117 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 WDFY4Q6ZS81 3184 aa3.28□□□□□ -1.88
PGAP1-206ENST00000423035 STAB1Q9NY15 2570 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms