RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 HIST1H2BDP58876 126 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 SUMO2P61956 95 aaKnown RBP6.6□□□□□ -1.35
HERC3-204ENST00000422770 HIST1H2BCP62807 126 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 HIST2H2BEQ16778 126 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.6□□□□□ -1.35
HERC3-204ENST00000422770 C18orf32Q8TCD1 76 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 HIST1H2BHQ93079 126 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 HIST1H2BNQ99877 126 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 HIST1H2BMQ99879 126 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 SMIM2Q9BVW6 85 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 Q9UF83 564 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 LAMTOR2Q9Y2Q5 125 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 TNFRSF18Q9Y5U5 241 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 FRAS1Q86XX4 4008 aa6.6□□□□□ -1.35
HERC3-204ENST00000422770 DNAH6Q9C0G6 4158 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 TRBV10-1A0A0K0K1A3 114 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 SDHAF1A6NFY7 115 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 PPP1R17O96001 155 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 PMCHP20382 165 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 TIRAPP58753 221 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 TNP2Q05952 138 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 LELP1Q5T871 98 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 FA2HQ7L5A8 372 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 BAGE3Q86Y29 109 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 DEFB104AQ8WTQ1 72 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 NIT2Q9NQR4 276 aa6.59□□□□□ -1.35
HERC3-204ENST00000422770 C10orf126Q8N4M7 172 aa6.58□□□□□ -1.36
HERC3-204ENST00000422770 DNAJC30Q96LL9 226 aa6.58□□□□□ -1.36
HERC3-204ENST00000422770 TMEM70Q9BUB7 260 aa6.58□□□□□ -1.36
HERC3-204ENST00000422770 Q9HAA7 133 aa6.58□□□□□ -1.36
HERC3-204ENST00000422770 TRBV7-3A0A075B6L6 115 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 TRBV6-5A0A0K0K1A5 114 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 PSCAO43653 123 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 SERF1AO75920 110 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 DNAH10OSP0CZ25 163 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 LINC00694P0DN24 101 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 FCER1GP30273 86 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 NDUFA6P56556 154 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 UBE2D3P61077 147 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 UBE2D2P62837 147 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 PRSS3P2Q8NHM4 247 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 C20orf78Q9BR46 151 aa6.57□□□□□ -1.36
HERC3-204ENST00000422770 NXT2Q9NPJ8 142 aaKnown RBP6.57□□□□□ -1.36
HERC3-204ENST00000422770 TCAPO15273 167 aa6.56□□□□□ -1.36
HERC3-204ENST00000422770 IFI27P40305 119 aaPredicted RBP6.56□□□□□ -1.36
HERC3-204ENST00000422770 COTL1Q14019 142 aa6.56□□□□□ -1.36
HERC3-204ENST00000422770 LINC01556Q5JQF7 62 aa6.56□□□□□ -1.36
HERC3-204ENST00000422770 NFE4Q86UQ8 179 aa6.56□□□□□ -1.36
HERC3-204ENST00000422770 Q8N3U1 123 aa6.56□□□□□ -1.36
HERC3-204ENST00000422770 Q8N8P6 123 aa6.56□□□□□ -1.36
HERC3-204ENST00000422770 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
HERC3-204ENST00000422770 TMEM262E9PQX1 116 aa6.55□□□□□ -1.36
HERC3-204ENST00000422770 EREGO14944 169 aa6.55□□□□□ -1.36
HERC3-204ENST00000422770 HSBP1O75506 76 aa6.55□□□□□ -1.36
HERC3-204ENST00000422770 TSHBP01222 138 aa6.55□□□□□ -1.36
HERC3-204ENST00000422770 S100A6P06703 90 aa6.55□□□□□ -1.36
HERC3-204ENST00000422770 AMTP48728 403 aa6.55□□□□□ -1.36
HERC3-204ENST00000422770 PDZD11Q5EBL8 140 aa6.55□□□□□ -1.36
HERC3-204ENST00000422770 KIR2DL4Q99706 377 aa6.55□□□□□ -1.36
HERC3-204ENST00000422770 CHCHD5Q9BSY4 110 aa6.55□□□□□ -1.36
HERC3-204ENST00000422770 A0A087WX48 190 aa6.54□□□□□ -1.36
HERC3-204ENST00000422770 I3L3M4 83 aa6.54□□□□□ -1.36
HERC3-204ENST00000422770 K7EP13 123 aa6.54□□□□□ -1.36
HERC3-204ENST00000422770 VCYO14598 125 aa6.54□□□□□ -1.36
HERC3-204ENST00000422770 POLR2KP53803 58 aaKnown RBP6.54□□□□□ -1.36
HERC3-204ENST00000422770 LINC00310P59036 64 aa6.54□□□□□ -1.36
HERC3-204ENST00000422770 RPL32P62910 135 aaKnown RBP6.54□□□□□ -1.36
HERC3-204ENST00000422770 Q0VG73 95 aa6.54□□□□□ -1.36
HERC3-204ENST00000422770 PMCHL1Q16048 86 aa6.54□□□□□ -1.36
HERC3-204ENST00000422770 DAZ4Q86SG3 579 aaKnown RBP6.54□□□□□ -1.36
HERC3-204ENST00000422770 URB1-AS1Q96HZ7 61 aa6.54□□□□□ -1.36
HERC3-204ENST00000422770 DAZ3Q9NR90 486 aaKnown RBP6.54□□□□□ -1.36
HERC3-204ENST00000422770 AP5S1Q9NUS5 200 aa6.54□□□□□ -1.36
HERC3-204ENST00000422770 TRBV27A0A0K0K1C4 114 aa6.53□□□□□ -1.36
HERC3-204ENST00000422770 C16orf90A8MZG2 172 aa6.53□□□□□ -1.36
HERC3-204ENST00000422770 BTF3P20290 206 aaKnown RBP6.53□□□□□ -1.36
HERC3-204ENST00000422770 SPATA12Q7Z6I5 190 aa6.53□□□□□ -1.36
HERC3-204ENST00000422770 NIT1Q86X76 327 aa6.53□□□□□ -1.36
HERC3-204ENST00000422770 DNAH10Q8IVF4 4471 aa6.52□□□□□ -1.36
HERC3-204ENST00000422770 HERC2O95714 4834 aa6.52□□□□□ -1.37
HERC3-204ENST00000422770 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.52□□□□□ -1.37
HERC3-204ENST00000422770 TRBV6-8A0A0A6YYG3 113 aa6.52□□□□□ -1.37
HERC3-204ENST00000422770 IGHV1-24A0A0C4DH33 117 aa6.52□□□□□ -1.37
HERC3-204ENST00000422770 IGKV2-29A2NJV5 120 aaPredicted RBP6.52□□□□□ -1.37
HERC3-204ENST00000422770 IBA57-AS1B1ANH7 110 aa6.52□□□□□ -1.37
HERC3-204ENST00000422770 LAGE3Q14657 143 aa6.52□□□□□ -1.37
HERC3-204ENST00000422770 ORMDL2Q53FV1 153 aa6.52□□□□□ -1.37
HERC3-204ENST00000422770 CHCHD1Q96BP2 118 aaKnown RBP6.52□□□□□ -1.37
HERC3-204ENST00000422770 TMEM243Q9BU79 118 aa6.52□□□□□ -1.37
HERC3-204ENST00000422770 KLK12Q9UKR0 248 aa6.52□□□□□ -1.37
HERC3-204ENST00000422770 HECTD4Q9Y4D8 3996 aa6.52□□□□□ -1.37
HERC3-204ENST00000422770 TRBV25-1A0A075B6N4 114 aa6.51□□□□□ -1.37
HERC3-204ENST00000422770 PRSS47A8MTI9 375 aa6.51□□□□□ -1.37
HERC3-204ENST00000422770 UBE2L6O14933 153 aa6.51□□□□□ -1.37
HERC3-204ENST00000422770 HBDP02042 147 aa6.51□□□□□ -1.37
HERC3-204ENST00000422770 CRPP02741 224 aa6.51□□□□□ -1.37
HERC3-204ENST00000422770 LINC00614P0C842 121 aa6.51□□□□□ -1.37
HERC3-204ENST00000422770 GAGE6Q13070 117 aa6.51□□□□□ -1.37
HERC3-204ENST00000422770 TMEM97Q5BJF2 176 aa6.51□□□□□ -1.37
HERC3-204ENST00000422770 Q6ZRN7 208 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms