RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 NDUFS6O75380 124 aaKnown RBP10.6□□□□□ -0.71
UPF3AP3-201ENST00000420996 H2AFB1P0C5Y9 115 aa10.6□□□□□ -0.71
UPF3AP3-201ENST00000420996 TRGC1P0CF51 173 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 AMTP48728 403 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 LRP2P98164 4655 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 COTL1Q14019 142 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 ZNF345Q14585 488 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 MAJINQ3KP22 176 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 PRSS3P2Q8NHM4 247 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 GTSF1Q8WW33 167 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 C11orf52Q96A22 123 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 C19orf71A6NCJ1 209 aa10.58□□□□□ -0.72
UPF3AP3-201ENST00000420996 PRR3P79522 188 aaKnown RBP10.58□□□□□ -0.72
UPF3AP3-201ENST00000420996 CENPWQ5EE01 88 aa10.58□□□□□ -0.72
UPF3AP3-201ENST00000420996 RNF213Q63HN8 5207 aa10.58□□□□□ -0.72
UPF3AP3-201ENST00000420996 IGKV2-24A0A0C4DH68 120 aa10.57□□□□□ -0.72
UPF3AP3-201ENST00000420996 XKRY2A2RUG3 117 aa10.57□□□□□ -0.72
UPF3AP3-201ENST00000420996 HIGD2BQ4VC39 106 aa10.57□□□□□ -0.72
UPF3AP3-201ENST00000420996 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
UPF3AP3-201ENST00000420996 NTF3P20783 257 aa10.56□□□□□ -0.72
UPF3AP3-201ENST00000420996 LYZL1Q6UWQ5 148 aa10.56□□□□□ -0.72
UPF3AP3-201ENST00000420996 STPG4Q8N801 248 aa10.56□□□□□ -0.72
UPF3AP3-201ENST00000420996 SMIM12Q96EX1 92 aa10.56□□□□□ -0.72
UPF3AP3-201ENST00000420996 IGKV3OR2-268A0A0C4DH90 116 aa10.55□□□□□ -0.72
UPF3AP3-201ENST00000420996 IFNA1P01562 189 aa10.55□□□□□ -0.72
UPF3AP3-201ENST00000420996 CHCHD10Q8WYQ3 142 aaPredicted RBP10.55□□□□□ -0.72
UPF3AP3-201ENST00000420996 GNG13Q9P2W3 67 aa10.55□□□□□ -0.72
UPF3AP3-201ENST00000420996 GVQW2A0A096LPI5 108 aaPredicted RBP10.54□□□□□ -0.72
UPF3AP3-201ENST00000420996 A0A0J9YXV3 536 aa10.54□□□□□ -0.72
UPF3AP3-201ENST00000420996 HMSDA8MTL9 139 aa10.54□□□□□ -0.72
UPF3AP3-201ENST00000420996 CCL20P78556 96 aa10.54□□□□□ -0.72
UPF3AP3-201ENST00000420996 LYPD6BQ8NI32 183 aa10.54□□□□□ -0.72
UPF3AP3-201ENST00000420996 RAB19A4D1S5 217 aa10.53□□□□□ -0.72
UPF3AP3-201ENST00000420996 GNG4P50150 75 aa10.53□□□□□ -0.72
UPF3AP3-201ENST00000420996 KRTAP10-8P60410 259 aa10.53□□□□□ -0.72
UPF3AP3-201ENST00000420996 ODF1Q14990 250 aa10.53□□□□□ -0.72
UPF3AP3-201ENST00000420996 C9orf62Q8N4C0 152 aa10.53□□□□□ -0.72
UPF3AP3-201ENST00000420996 A0A096LNI7 61 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 TRAV1-1A0A0B4J248 108 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 KANTRA0A1W2PQU2 76 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 BCL2L11O43521 198 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 EIF5AP63241 154 aaKnown RBP10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 AMMECR1LQ6DCA0 310 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 REG3GQ6UW15 175 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 GATD1Q8NB37 220 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 BIN3Q9NQY0 253 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 H7C423 109 aa10.51□□□□□ -0.73
UPF3AP3-201ENST00000420996 NCR2O95944 276 aa10.51□□□□□ -0.73
UPF3AP3-201ENST00000420996 CTRLP40313 264 aa10.51□□□□□ -0.73
UPF3AP3-201ENST00000420996 Q6ZNX1 250 aa10.51□□□□□ -0.73
UPF3AP3-201ENST00000420996 FOXI1Q12951 378 aa10.5□□□□□ -0.73
UPF3AP3-201ENST00000420996 TWIST1Q15672 202 aa10.5□□□□□ -0.73
UPF3AP3-201ENST00000420996 RNASEKQ6P5S7 137 aaKnown RBP10.5□□□□□ -0.73
UPF3AP3-201ENST00000420996 CNFNQ9BYD5 112 aa10.5□□□□□ -0.73
UPF3AP3-201ENST00000420996 PKIGQ9Y2B9 76 aa10.5□□□□□ -0.73
UPF3AP3-201ENST00000420996 TRBV20OR9-2A0A075B6H5 130 aa10.49□□□□□ -0.73
UPF3AP3-201ENST00000420996 TRAV26-2A0A0B4J265 109 aa10.49□□□□□ -0.73
UPF3AP3-201ENST00000420996 SRSF9Q13242 221 aaKnown RBP eCLIP10.49□□□□□ -0.73
UPF3AP3-201ENST00000420996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 PDE6DO43924 150 aa10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 FGF6P10767 208 aa10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 MEF2BQ02080 365 aaPredicted RBP10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 TEX46H3BTG2 121 aa10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 APCSP02743 223 aa10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 Q6ZRP5 223 aa10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 OR5A1Q8NGJ0 315 aa10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 RPL39LQ96EH5 51 aaKnown RBP10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 MED9Q9NWA0 146 aa10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.73
UPF3AP3-201ENST00000420996 ZNF25P17030 456 aaPredicted RBP10.46□□□□□ -0.73
UPF3AP3-201ENST00000420996 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
UPF3AP3-201ENST00000420996 TCTE3Q8IZS6 198 aa10.46□□□□□ -0.73
UPF3AP3-201ENST00000420996 hCG_2014768A0A024R1R8 64 aa10.45□□□□□ -0.74
UPF3AP3-201ENST00000420996 XCL1P47992 114 aa10.45□□□□□ -0.74
UPF3AP3-201ENST00000420996 TEX261Q6UWH6 196 aa10.45□□□□□ -0.74
UPF3AP3-201ENST00000420996 CARD19Q96LW7 228 aa10.45□□□□□ -0.74
UPF3AP3-201ENST00000420996 LINC00959A0A1B0GUT2 108 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 SDHAF1A6NFY7 115 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 CCL25O15444 150 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 SMIM15Q7Z3B0 74 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 LINC00526Q96FQ7 95 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 BTF3L4Q96K17 158 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 RPP21Q9H633 154 aaKnown RBP10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 FAM231BA6NCW3 169 aa10.43□□□□□ -0.74
UPF3AP3-201ENST00000420996 TMEM101Q96IK0 257 aa10.43□□□□□ -0.74
UPF3AP3-201ENST00000420996 I3L3M4 83 aa10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 PMCHP20382 165 aa10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 FOXA3P55318 350 aaPredicted RBP10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 SYCNQ0VAF6 134 aa10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 EIF5AL1Q6IS14 154 aaKnown RBP10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 RNASE7Q9H1E1 156 aaKnown RBP10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 A0A1B0GVG6 124 aa10.41□□□□□ -0.74
UPF3AP3-201ENST00000420996 ZNF561-AS1K7EIQ3 104 aa10.41□□□□□ -0.74
UPF3AP3-201ENST00000420996 BCL2P10415 239 aa10.41□□□□□ -0.74
UPF3AP3-201ENST00000420996 ESDP10768 282 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms