RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 SETXQ7Z333 2677 aaKnown RBP5.41□□□□□ -1.54
BDNF-209ENST00000420794 PDZD2O15018 2839 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 TRBV20-1A0A075B6N2 111 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 RBMY1BA6NDE4 496 aaKnown RBP5.41□□□□□ -1.54
BDNF-209ENST00000420794 RBMY1EA6NEQ0 496 aaKnown RBP5.41□□□□□ -1.54
BDNF-209ENST00000420794 LYRM9A8MSI8 78 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 RS1O15537 224 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 ATP5G1P05496 136 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 RBMY1DP0C7P1 496 aaKnown RBP5.41□□□□□ -1.54
BDNF-209ENST00000420794 IFITM1P13164 125 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 PIK3CD-AS1Q5SR53 167 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 STPG4Q8N801 248 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 ASH1LQ9NR48 2969 aaKnown RBP5.41□□□□□ -1.54
BDNF-209ENST00000420794 CYSRT1A8MQ03 144 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 I3L3M4 83 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 CRXO43186 299 aaPredicted RBP5.41□□□□□ -1.54
BDNF-209ENST00000420794 GAGE13Q4V321 117 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 SUMO4Q6EEV6 95 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 C1orf158Q8N1D5 194 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 ANKRD29Q8N6D5 301 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 ZNRF2Q8NHG8 242 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 EDA2RQ9HAV5 297 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 TRAV4A0A0B4J268 109 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 DNAJC30Q96LL9 226 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 PMCHL2Q9BQD1 86 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 SPATA25Q9BR10 227 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 LINC00467Q9BRT7 94 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 JPT2Q9H910 190 aa5.41□□□□□ -1.54
BDNF-209ENST00000420794 CSDC2Q9Y534 153 aaKnown RBP5.41□□□□□ -1.54
BDNF-209ENST00000420794 K7EMI3 77 aa5.4□□□□□ -1.54
BDNF-209ENST00000420794 GAGE2AQ6NT46 116 aa5.4□□□□□ -1.54
BDNF-209ENST00000420794 Q6ZTI0 123 aa5.4□□□□□ -1.54
BDNF-209ENST00000420794 SPANXCQ9NY87 97 aa5.4□□□□□ -1.54
BDNF-209ENST00000420794 PAX4O43316 350 aa5.4□□□□□ -1.55
BDNF-209ENST00000420794 TMEM97Q5BJF2 176 aa5.4□□□□□ -1.55
BDNF-209ENST00000420794 PHLDA1Q8WV24 401 aaPredicted RBP5.4□□□□□ -1.55
BDNF-209ENST00000420794 AGRNO00468 2067 aa5.4□□□□□ -1.55
BDNF-209ENST00000420794 G3V4G9 280 aa5.4□□□□□ -1.55
BDNF-209ENST00000420794 DEFB4AO15263 64 aa5.4□□□□□ -1.55
BDNF-209ENST00000420794 DAZ2Q13117 558 aaKnown RBP5.4□□□□□ -1.55
BDNF-209ENST00000420794 ZFP2Q6ZN57 461 aa5.4□□□□□ -1.55
BDNF-209ENST00000420794 Q6ZVH6 145 aa5.4□□□□□ -1.55
BDNF-209ENST00000420794 GATA1P15976 413 aaPredicted RBP5.39□□□□□ -1.55
BDNF-209ENST00000420794 GCSHP23434 173 aa5.39□□□□□ -1.55
BDNF-209ENST00000420794 COA6Q5JTJ3 125 aaKnown RBP5.39□□□□□ -1.55
BDNF-209ENST00000420794 FAM222AQ5U5X8 452 aa5.39□□□□□ -1.55
BDNF-209ENST00000420794 CHCHD5Q9BSY4 110 aa5.39□□□□□ -1.55
BDNF-209ENST00000420794 K7EQD1 137 aa5.39□□□□□ -1.55
BDNF-209ENST00000420794 HERVK_113P61574 105 aa5.39□□□□□ -1.55
BDNF-209ENST00000420794 IFI27L1Q96BM0 104 aa5.39□□□□□ -1.55
BDNF-209ENST00000420794 SCRT2Q9NQ03 307 aa5.39□□□□□ -1.55
BDNF-209ENST00000420794 A8MTW9 85 aa5.39□□□□□ -1.55
BDNF-209ENST00000420794 TRBV10-1A0A0K0K1A3 114 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 RASL10AQ92737 203 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 RPL39LQ96EH5 51 aaKnown RBP5.38□□□□□ -1.55
BDNF-209ENST00000420794 C9JAW5 83 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 PRM2P04554 102 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 GATD1Q8NB37 220 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 IGHV4-28A0A0C4DH34 117 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 SMIM13P0DJ93 91 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 CFAP126Q5VTH2 177 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 SPANXB1Q9NS25 103 aaPredicted RBP5.38□□□□□ -1.55
BDNF-209ENST00000420794 PRO0255Q9UI72 69 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 HHLA3Q9XRX5 114 aa5.38□□□□□ -1.55
BDNF-209ENST00000420794 TAL2Q16559 108 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 C2orf66Q6UXQ4 117 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 DEFB104AQ8WTQ1 72 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 COPS9Q8WXC6 57 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 COL6A5A8TX70 2615 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 TRBV7-3A0A075B6L6 115 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 TRBV25-1A0A075B6N4 114 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 PRB2P02812 416 aaPredicted RBP5.37□□□□□ -1.55
BDNF-209ENST00000420794 ERG28Q9UKR5 140 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 A0A087WX48 190 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 LOC107984156A0A0G2JMH3 177 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 MPV17L2Q567V2 206 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 NEGR1Q7Z3B1 354 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 SH2D6Q7Z4S9 175 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 DAZ4Q86SG3 579 aaKnown RBP5.37□□□□□ -1.55
BDNF-209ENST00000420794 ARL17AQ8IVW1 177 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 BAALCQ8WXS3 180 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 DAZ3Q9NR90 486 aaKnown RBP5.37□□□□□ -1.55
BDNF-209ENST00000420794 IGHV3-38A0A0C4DH36 116 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 RNF185Q96GF1 192 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 PPDPFQ9H3Y8 114 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 C19orf73Q9NVV2 129 aa5.37□□□□□ -1.55
BDNF-209ENST00000420794 IGHV1-24A0A0C4DH33 117 aa5.36□□□□□ -1.55
BDNF-209ENST00000420794 CRYGDP07320 174 aa5.36□□□□□ -1.55
BDNF-209ENST00000420794 RBMY1A1P0DJD3 496 aaKnown RBP5.36□□□□□ -1.55
BDNF-209ENST00000420794 RBMY1CP0DJD4 496 aa5.36□□□□□ -1.55
BDNF-209ENST00000420794 RBMY1FQ15415 496 aaKnown RBP5.36□□□□□ -1.55
BDNF-209ENST00000420794 TP53TG1Q9Y2A0 90 aa5.36□□□□□ -1.55
BDNF-209ENST00000420794 A0A0J9YY99 117 aa5.36□□□□□ -1.55
BDNF-209ENST00000420794 NXPH4O95158 308 aa5.36□□□□□ -1.55
BDNF-209ENST00000420794 GYPEP15421 78 aa5.36□□□□□ -1.55
BDNF-209ENST00000420794 SEC11AP67812 179 aa5.36□□□□□ -1.55
BDNF-209ENST00000420794 C11orf45Q8TAV5 145 aa5.36□□□□□ -1.55
BDNF-209ENST00000420794 TMEM243Q9BU79 118 aa5.36□□□□□ -1.55
BDNF-209ENST00000420794 NACAE9PAV3 2078 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms