RNA–Protein interactions for RNA: ENST00000420666.1

ITSN1-215, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-215ENST00000420666 TRGC1P0CF51 173 aa9.32□□□□□ -0.92
ITSN1-215ENST00000420666 WDR73Q6P4I2 378 aa9.32□□□□□ -0.92
ITSN1-215ENST00000420666 CFAP161Q6P656 301 aa9.32□□□□□ -0.92
ITSN1-215ENST00000420666 SMIM12Q96EX1 92 aa9.32□□□□□ -0.92
ITSN1-215ENST00000420666 DPH3P1Q9H4G8 78 aa9.32□□□□□ -0.92
ITSN1-215ENST00000420666 PLAC8Q9NZF1 115 aa9.32□□□□□ -0.92
ITSN1-215ENST00000420666 TRAV1-1A0A0B4J248 108 aa9.31□□□□□ -0.92
ITSN1-215ENST00000420666 UBE2L6O14933 153 aa9.31□□□□□ -0.92
ITSN1-215ENST00000420666 SULT1A2P50226 295 aa9.31□□□□□ -0.92
ITSN1-215ENST00000420666 COTL1Q14019 142 aa9.31□□□□□ -0.92
ITSN1-215ENST00000420666 LYZL1Q6UWQ5 148 aa9.31□□□□□ -0.92
ITSN1-215ENST00000420666 RAB19A4D1S5 217 aa9.3□□□□□ -0.92
ITSN1-215ENST00000420666 IFNA1P01562 189 aa9.3□□□□□ -0.92
ITSN1-215ENST00000420666 NTF3P20783 257 aa9.3□□□□□ -0.92
ITSN1-215ENST00000420666 AMTP48728 403 aa9.3□□□□□ -0.92
ITSN1-215ENST00000420666 TNXBP22105 4242 aa9.29□□□□□ -0.92
ITSN1-215ENST00000420666 GAGE12HA6NDE8 117 aa9.29□□□□□ -0.92
ITSN1-215ENST00000420666 RPS10P46783 165 aaKnown RBP9.29□□□□□ -0.92
ITSN1-215ENST00000420666 GNG4P50150 75 aa9.29□□□□□ -0.92
ITSN1-215ENST00000420666 C9orf62Q8N4C0 152 aa9.29□□□□□ -0.92
ITSN1-215ENST00000420666 C15orf56Q8N910 161 aa9.29□□□□□ -0.92
ITSN1-215ENST00000420666 C7orf33Q8WU49 177 aa9.29□□□□□ -0.92
ITSN1-215ENST00000420666 BIN3Q9NQY0 253 aa9.29□□□□□ -0.92
ITSN1-215ENST00000420666 PHOX2AO14813 284 aa9.28□□□□□ -0.92
ITSN1-215ENST00000420666 COX6A2Q02221 97 aa9.28□□□□□ -0.92
ITSN1-215ENST00000420666 TEX46H3BTG2 121 aa9.27□□□□□ -0.93
ITSN1-215ENST00000420666 NDUFS6O75380 124 aaKnown RBP9.27□□□□□ -0.93
ITSN1-215ENST00000420666 PDE6DO43924 150 aa9.26□□□□□ -0.93
ITSN1-215ENST00000420666 CTRLP40313 264 aa9.26□□□□□ -0.93
ITSN1-215ENST00000420666 MEF2BQ02080 365 aaPredicted RBP9.26□□□□□ -0.93
ITSN1-215ENST00000420666 PRSS3P2Q8NHM4 247 aa9.26□□□□□ -0.93
ITSN1-215ENST00000420666 CNFNQ9BYD5 112 aa9.26□□□□□ -0.93
ITSN1-215ENST00000420666 MED9Q9NWA0 146 aa9.26□□□□□ -0.93
ITSN1-215ENST00000420666 TRBV20OR9-2A0A075B6H5 130 aa9.25□□□□□ -0.93
ITSN1-215ENST00000420666 IGKV3OR2-268A0A0C4DH90 116 aa9.25□□□□□ -0.93
ITSN1-215ENST00000420666 TWIST1Q15672 202 aa9.25□□□□□ -0.93
ITSN1-215ENST00000420666 MAJINQ3KP22 176 aa9.25□□□□□ -0.93
ITSN1-215ENST00000420666 HIGD2BQ4VC39 106 aa9.25□□□□□ -0.93
ITSN1-215ENST00000420666 GATD1Q8NB37 220 aa9.25□□□□□ -0.93
ITSN1-215ENST00000420666 NUDT10Q8NFP7 164 aa9.25□□□□□ -0.93
ITSN1-215ENST00000420666 CHCHD10Q8WYQ3 142 aaPredicted RBP9.25□□□□□ -0.93
ITSN1-215ENST00000420666 NUDT11Q96G61 164 aa9.25□□□□□ -0.93
ITSN1-215ENST00000420666 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
ITSN1-215ENST00000420666 H7C423 109 aa9.24□□□□□ -0.93
ITSN1-215ENST00000420666 NCR2O95944 276 aa9.24□□□□□ -0.93
ITSN1-215ENST00000420666 LRP2P98164 4655 aa9.24□□□□□ -0.93
ITSN1-215ENST00000420666 AMMECR1LQ6DCA0 310 aa9.24□□□□□ -0.93
ITSN1-215ENST00000420666 EIF5AL1Q6IS14 154 aaKnown RBP9.24□□□□□ -0.93
ITSN1-215ENST00000420666 GTSF1Q8WW33 167 aa9.24□□□□□ -0.93
ITSN1-215ENST00000420666 LINC01600Q96MT4 127 aa9.24□□□□□ -0.93
ITSN1-215ENST00000420666 IGKV2-24A0A0C4DH68 120 aa9.23□□□□□ -0.93
ITSN1-215ENST00000420666 Q6ZNX1 250 aa9.23□□□□□ -0.93
ITSN1-215ENST00000420666 TRAV26-2A0A0B4J265 109 aa9.22□□□□□ -0.93
ITSN1-215ENST00000420666 PRR3P79522 188 aaKnown RBP9.22□□□□□ -0.93
ITSN1-215ENST00000420666 RNASEKQ6P5S7 137 aaKnown RBP9.22□□□□□ -0.93
ITSN1-215ENST00000420666 STPG4Q8N801 248 aa9.22□□□□□ -0.93
ITSN1-215ENST00000420666 RPP21Q9H633 154 aaKnown RBP9.22□□□□□ -0.93
ITSN1-215ENST00000420666 RNF213Q63HN8 5207 aa9.21□□□□□ -0.93
ITSN1-215ENST00000420666 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.21□□□□□ -0.94
ITSN1-215ENST00000420666 IGKV2-29A2NJV5 120 aaPredicted RBP9.21□□□□□ -0.94
ITSN1-215ENST00000420666 APCSP02743 223 aa9.21□□□□□ -0.94
ITSN1-215ENST00000420666 BCL2P10415 239 aa9.21□□□□□ -0.94
ITSN1-215ENST00000420666 FGF6P10767 208 aa9.21□□□□□ -0.94
ITSN1-215ENST00000420666 FOXI1Q12951 378 aa9.21□□□□□ -0.94
ITSN1-215ENST00000420666 TEX261Q6UWH6 196 aa9.21□□□□□ -0.94
ITSN1-215ENST00000420666 RPL39LQ96EH5 51 aaKnown RBP9.21□□□□□ -0.94
ITSN1-215ENST00000420666 SMIM15Q7Z3B0 74 aa9.2□□□□□ -0.94
ITSN1-215ENST00000420666 LYPD6BQ8NI32 183 aa9.2□□□□□ -0.94
ITSN1-215ENST00000420666 RNASE7Q9H1E1 156 aaKnown RBP9.2□□□□□ -0.94
ITSN1-215ENST00000420666 LINC00474Q9P2X8 69 aa9.2□□□□□ -0.94
ITSN1-215ENST00000420666 A0A096LNI7 61 aa9.19□□□□□ -0.94
ITSN1-215ENST00000420666 SDHAF1A6NFY7 115 aa9.19□□□□□ -0.94
ITSN1-215ENST00000420666 ZNF25P17030 456 aaPredicted RBP9.19□□□□□ -0.94
ITSN1-215ENST00000420666 TAGLN2P37802 199 aaKnown RBP9.19□□□□□ -0.94
ITSN1-215ENST00000420666 OR5A1Q8NGJ0 315 aa9.19□□□□□ -0.94
ITSN1-215ENST00000420666 OCC1Q8TAD7 63 aa9.19□□□□□ -0.94
ITSN1-215ENST00000420666 PKIGQ9Y2B9 76 aa9.19□□□□□ -0.94
ITSN1-215ENST00000420666 A0A0J9YXV3 536 aa9.18□□□□□ -0.94
ITSN1-215ENST00000420666 FAM231BA6NCW3 169 aa9.18□□□□□ -0.94
ITSN1-215ENST00000420666 K7EN84 100 aa9.18□□□□□ -0.94
ITSN1-215ENST00000420666 FOXA3P55318 350 aaPredicted RBP9.18□□□□□ -0.94
ITSN1-215ENST00000420666 SPINK6Q6UWN8 80 aa9.18□□□□□ -0.94
ITSN1-215ENST00000420666 BTF3L4Q96K17 158 aa9.18□□□□□ -0.94
ITSN1-215ENST00000420666 IGHV1-58A0A0C4DH39 117 aa9.17□□□□□ -0.94
ITSN1-215ENST00000420666 LINC00959A0A1B0GUT2 108 aa9.17□□□□□ -0.94
ITSN1-215ENST00000420666 I3L3M4 83 aa9.17□□□□□ -0.94
ITSN1-215ENST00000420666 PMCHP20382 165 aa9.17□□□□□ -0.94
ITSN1-215ENST00000420666 XCL1P47992 114 aa9.17□□□□□ -0.94
ITSN1-215ENST00000420666 KRTAP10-8P60410 259 aa9.17□□□□□ -0.94
ITSN1-215ENST00000420666 TMEM101Q96IK0 257 aa9.17□□□□□ -0.94
ITSN1-215ENST00000420666 TRBV6-5A0A0K0K1A5 114 aa9.16□□□□□ -0.94
ITSN1-215ENST00000420666 CCL25O15444 150 aa9.16□□□□□ -0.94
ITSN1-215ENST00000420666 ESDP10768 282 aa9.16□□□□□ -0.94
ITSN1-215ENST00000420666 REG3GQ6UW15 175 aa9.16□□□□□ -0.94
ITSN1-215ENST00000420666 FAM210AQ96ND0 272 aa9.16□□□□□ -0.94
ITSN1-215ENST00000420666 SRSF9Q13242 221 aaKnown RBP eCLIP9.15□□□□□ -0.94
ITSN1-215ENST00000420666 CARD19Q96LW7 228 aa9.15□□□□□ -0.94
ITSN1-215ENST00000420666 GATCO43716 136 aaKnown RBP9.14□□□□□ -0.95
ITSN1-215ENST00000420666 SS18Q15532 418 aa9.14□□□□□ -0.95
ITSN1-215ENST00000420666 Q6ZRP5 223 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms