RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 K7EQG2 157 aa11.19□□□□□ -0.62
SEMA3B-203ENST00000419007 XGP55808 180 aa11.19□□□□□ -0.62
SEMA3B-203ENST00000419007 MAPK1IP1LQ8NDC0 245 aa11.19□□□□□ -0.62
SEMA3B-203ENST00000419007 ANKRD17O75179 2603 aaKnown RBP11.19□□□□□ -0.62
SEMA3B-203ENST00000419007 TRAV8-3A0A0A6YYJ7 113 aa11.19□□□□□ -0.62
SEMA3B-203ENST00000419007 SLC25A20O43772 301 aa11.19□□□□□ -0.62
SEMA3B-203ENST00000419007 NPC2P61916 151 aa11.19□□□□□ -0.62
SEMA3B-203ENST00000419007 Q6ZUT4 128 aa11.18□□□□□ -0.62
SEMA3B-203ENST00000419007 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
SEMA3B-203ENST00000419007 B4DSR2 109 aa11.17□□□□□ -0.62
SEMA3B-203ENST00000419007 IGHV3-33P01772 117 aa11.17□□□□□ -0.62
SEMA3B-203ENST00000419007 WNK1Q9H4A3 2382 aa11.17□□□□□ -0.62
SEMA3B-203ENST00000419007 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
SEMA3B-203ENST00000419007 CRYBA4P53673 196 aa11.17□□□□□ -0.62
SEMA3B-203ENST00000419007 TIMM21Q9BVV7 248 aa11.17□□□□□ -0.62
SEMA3B-203ENST00000419007 IGHV3-30-3P0DP02 117 aa11.16□□□□□ -0.62
SEMA3B-203ENST00000419007 GEMIN7Q9H840 131 aaKnown RBP11.16□□□□□ -0.62
SEMA3B-203ENST00000419007 GCN1Q92616 2671 aaKnown RBP11.16□□□□□ -0.62
SEMA3B-203ENST00000419007 MXRA5Q9NR99 2828 aa11.16□□□□□ -0.62
SEMA3B-203ENST00000419007 SHISA2Q6UWI4 295 aa11.16□□□□□ -0.62
SEMA3B-203ENST00000419007 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
SEMA3B-203ENST00000419007 ODF3Q96PU9 254 aa11.16□□□□□ -0.62
SEMA3B-203ENST00000419007 Q9UF83 564 aa11.16□□□□□ -0.62
SEMA3B-203ENST00000419007 TNFRSF18Q9Y5U5 241 aa11.16□□□□□ -0.62
SEMA3B-203ENST00000419007 SETD2Q9BYW2 2564 aaPredicted RBP11.16□□□□□ -0.62
SEMA3B-203ENST00000419007 TRGV11A0A075B6L2 103 aa11.15□□□□□ -0.62
SEMA3B-203ENST00000419007 A0A0J9YXY3 114 aa11.15□□□□□ -0.62
SEMA3B-203ENST00000419007 A8MZ25 164 aa11.15□□□□□ -0.62
SEMA3B-203ENST00000419007 HOXD3P31249 432 aaPredicted RBP11.15□□□□□ -0.62
SEMA3B-203ENST00000419007 ELANEP08246 267 aa11.15□□□□□ -0.63
SEMA3B-203ENST00000419007 RBMY1A1P0DJD3 496 aaKnown RBP11.15□□□□□ -0.63
SEMA3B-203ENST00000419007 RBMY1CP0DJD4 496 aa11.15□□□□□ -0.63
SEMA3B-203ENST00000419007 DEFB131AP59861 70 aa11.15□□□□□ -0.63
SEMA3B-203ENST00000419007 RBMY1FQ15415 496 aaKnown RBP11.15□□□□□ -0.63
SEMA3B-203ENST00000419007 DEFB136Q30KP8 78 aa11.15□□□□□ -0.63
SEMA3B-203ENST00000419007 TCTEX1D4Q5JR98 221 aa11.14□□□□□ -0.63
SEMA3B-203ENST00000419007 DUX3Q96PT4 197 aa11.14□□□□□ -0.63
SEMA3B-203ENST00000419007 IGHV3-38A0A0C4DH36 116 aa11.13□□□□□ -0.63
SEMA3B-203ENST00000419007 CITED1Q99966 193 aa11.13□□□□□ -0.63
SEMA3B-203ENST00000419007 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.13□□□□□ -0.63
SEMA3B-203ENST00000419007 NTN5Q8WTR8 489 aaPredicted RBP11.13□□□□□ -0.63
SEMA3B-203ENST00000419007 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.12□□□□□ -0.63
SEMA3B-203ENST00000419007 IGKV2-29A2NJV5 120 aaPredicted RBP11.12□□□□□ -0.63
SEMA3B-203ENST00000419007 FBN2P35556 2912 aa11.12□□□□□ -0.63
SEMA3B-203ENST00000419007 TRAV26-1A0A087WT03 109 aa11.12□□□□□ -0.63
SEMA3B-203ENST00000419007 A0A0B4J2C4 111 aa11.11□□□□□ -0.63
SEMA3B-203ENST00000419007 NDUFA12Q9UI09 145 aa11.11□□□□□ -0.63
SEMA3B-203ENST00000419007 M0R2P5 195 aa11.11□□□□□ -0.63
SEMA3B-203ENST00000419007 SBSPONQ8IVN8 264 aa11.11□□□□□ -0.63
SEMA3B-203ENST00000419007 SONP18583 2426 aaKnown RBP11.11□□□□□ -0.63
SEMA3B-203ENST00000419007 SLURP1P55000 103 aa11.11□□□□□ -0.63
SEMA3B-203ENST00000419007 KHDC1LQ5JSQ8 128 aa11.11□□□□□ -0.63
SEMA3B-203ENST00000419007 Q6ZSV7 163 aa11.11□□□□□ -0.63
SEMA3B-203ENST00000419007 HIST2H2BCQ6DN03 193 aa11.1□□□□□ -0.63
SEMA3B-203ENST00000419007 ATXN8Q156A1 80 aa11.1□□□□□ -0.63
SEMA3B-203ENST00000419007 ADAMTSL4-AS1Q5T5F5 129 aa11.1□□□□□ -0.63
SEMA3B-203ENST00000419007 HIST2H2BDQ6DRA6 164 aa11.1□□□□□ -0.63
SEMA3B-203ENST00000419007 TRIAP1O43715 76 aa11.1□□□□□ -0.63
SEMA3B-203ENST00000419007 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
SEMA3B-203ENST00000419007 Q6ZSN1 163 aa11.1□□□□□ -0.63
SEMA3B-203ENST00000419007 C18orf65Q6ZTR6 163 aa11.1□□□□□ -0.63
SEMA3B-203ENST00000419007 FLNBO75369 2602 aaKnown RBP11.09□□□□□ -0.63
SEMA3B-203ENST00000419007 DAND5Q8N907 189 aa11.09□□□□□ -0.63
SEMA3B-203ENST00000419007 TEX49A0A1B0GTD5 131 aa11.08□□□□□ -0.64
SEMA3B-203ENST00000419007 TMEM262E9PQX1 116 aa11.08□□□□□ -0.64
SEMA3B-203ENST00000419007 ITPR2Q14571 2701 aa11.08□□□□□ -0.64
SEMA3B-203ENST00000419007 MRPS36P82909 103 aaKnown RBP11.08□□□□□ -0.64
SEMA3B-203ENST00000419007 LINC01587Q99440 93 aa11.08□□□□□ -0.64
SEMA3B-203ENST00000419007 TEX15Q9BXT5 2789 aa11.07□□□□□ -0.64
SEMA3B-203ENST00000419007 IGHV1-58A0A0C4DH39 117 aa11.07□□□□□ -0.64
SEMA3B-203ENST00000419007 FAM104AQ969W3 186 aa11.07□□□□□ -0.64
SEMA3B-203ENST00000419007 A0A0U1RRA0 63 aa11.07□□□□□ -0.64
SEMA3B-203ENST00000419007 PYGO1Q9Y3Y4 419 aa11.07□□□□□ -0.64
SEMA3B-203ENST00000419007 DGAT2L7PQ6IED9 249 aa11.06□□□□□ -0.64
SEMA3B-203ENST00000419007 TEX29Q8N6K0 151 aa11.06□□□□□ -0.64
SEMA3B-203ENST00000419007 LINC01356Q8N9X3 169 aa11.06□□□□□ -0.64
SEMA3B-203ENST00000419007 JMJD1CQ15652 2540 aa11.06□□□□□ -0.64
SEMA3B-203ENST00000419007 IGHV3OR16-12A0A075B7B8 117 aa11.06□□□□□ -0.64
SEMA3B-203ENST00000419007 NBPF19A0A087WUL8 3843 aa11.06□□□□□ -0.64
SEMA3B-203ENST00000419007 ZFAND6Q6FIF0 208 aa11.06□□□□□ -0.64
SEMA3B-203ENST00000419007 LITAFQ99732 161 aa11.06□□□□□ -0.64
SEMA3B-203ENST00000419007 LINC00467Q9BRT7 94 aa11.06□□□□□ -0.64
SEMA3B-203ENST00000419007 RBMY1BA6NDE4 496 aaKnown RBP11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 RBMY1EA6NEQ0 496 aaKnown RBP11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 H3BMM0 161 aa11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 RBMY1DP0C7P1 496 aaKnown RBP11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 RNF183Q96D59 192 aa11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 VSIG2Q96IQ7 327 aa11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 ANAPC13Q9BS18 74 aa11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 APCP25054 2843 aa11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 GATA3P23771 443 aa11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 TMEM61Q8N0U2 210 aa11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 CLEC2BQ92478 149 aa11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 ZNF625Q96I27 306 aaPredicted RBP11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 VPREB3Q9UKI3 123 aa11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 ICOSQ9Y6W8 199 aa11.05□□□□□ -0.64
SEMA3B-203ENST00000419007 ZNF415Q09FC8 603 aa11.04□□□□□ -0.64
SEMA3B-203ENST00000419007 C2orf82Q6UX34 121 aa11.04□□□□□ -0.64
SEMA3B-203ENST00000419007 UBE2E2Q96LR5 201 aa11.04□□□□□ -0.64
SEMA3B-203ENST00000419007 COX6CP09669 75 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms