RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 SCN7AQ01118 1682 aa2.34□□□□□ -2.04
RFC4-205ENST00000418288 RGPD8O14715 1765 aaPredicted RBP2.33□□□□□ -2.04
RFC4-205ENST00000418288 RGPD5Q99666 1765 aa2.33□□□□□ -2.04
RFC4-205ENST00000418288 A0A1W2PNN7 141 aa2.33□□□□□ -2.04
RFC4-205ENST00000418288 A0A1W2PNU3 283 aaPredicted RBP2.33□□□□□ -2.04
RFC4-205ENST00000418288 J3QLW9 94 aa2.33□□□□□ -2.04
RFC4-205ENST00000418288 EDF1O60869 148 aaKnown RBP2.33□□□□□ -2.04
RFC4-205ENST00000418288 MIR22HGQ0VDD5 57 aa2.33□□□□□ -2.04
RFC4-205ENST00000418288 COL5A1-AS1Q5SY13 56 aa2.33□□□□□ -2.04
RFC4-205ENST00000418288 OR2T2Q6IF00 324 aa2.33□□□□□ -2.04
RFC4-205ENST00000418288 SLC25A26Q70HW3 274 aa2.33□□□□□ -2.04
RFC4-205ENST00000418288 BCORQ6W2J9 1755 aa2.33□□□□□ -2.04
RFC4-205ENST00000418288 SDK2Q58EX2 2172 aa2.33□□□□□ -2.04
RFC4-205ENST00000418288 CEP162Q5TB80 1403 aa2.33□□□□□ -2.04
RFC4-205ENST00000418288 MCM3APO60318 1980 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 EML5Q05BV3 1969 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 SHROOM3Q8TF72 1996 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 FREM3P0C091 2139 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 RYR1P21817 5038 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 RP1P56715 2156 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 ERC2-IT1O76042 136 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 RPL26P61254 145 aaKnown RBP2.32□□□□□ -2.04
RFC4-205ENST00000418288 PDE6HQ13956 83 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 ZNF833PQ6ZTB9 187 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 SPACA4Q8TDM5 124 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 SMIM7Q9BQ49 75 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 RYR3Q15413 4870 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 PDZD2O15018 2839 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 PLXNA4Q9HCM2 1894 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 KTN1Q86UP2 1357 aaKnown RBP2.32□□□□□ -2.04
RFC4-205ENST00000418288 CSMD1Q96PZ7 3565 aa2.32□□□□□ -2.04
RFC4-205ENST00000418288 ZSWIM8A7E2V4 1837 aa2.31□□□□□ -2.04
RFC4-205ENST00000418288 COL11A1P12107 1806 aaPredicted RBP2.31□□□□□ -2.04
RFC4-205ENST00000418288 PLXNA1Q9UIW2 1896 aa2.31□□□□□ -2.04
RFC4-205ENST00000418288 CXCL8P10145 99 aa2.31□□□□□ -2.04
RFC4-205ENST00000418288 KRTAP10-12P60413 245 aa2.31□□□□□ -2.04
RFC4-205ENST00000418288 CNBPP62633 177 aaKnown RBP2.31□□□□□ -2.04
RFC4-205ENST00000418288 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
RFC4-205ENST00000418288 CASC2Q6XLA1 102 aa2.31□□□□□ -2.04
RFC4-205ENST00000418288 C10orf105Q8TEF2 133 aa2.31□□□□□ -2.04
RFC4-205ENST00000418288 IFT172Q9UG01 1749 aa2.31□□□□□ -2.04
RFC4-205ENST00000418288 HIVEP3Q5T1R4 2406 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 TRAV14DV4A0A0A6YYC5 116 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 A0A1W2PRS3 328 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 NDUFB6O95139 128 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 ADCYAP1P18509 176 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 Q1T7F1 81 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 PRR9Q5T870 116 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 CLECL1Q8IZS7 167 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 SVBPQ8N300 66 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 C9orf62Q8N4C0 152 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 DSCR8Q96T75 97 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 TMEM242Q9NWH2 141 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 CHD7Q9P2D1 2997 aa2.3□□□□□ -2.04
RFC4-205ENST00000418288 SPENQ96T58 3664 aaKnown RBP2.29□□□□□ -2.04
RFC4-205ENST00000418288 CRYBG3Q68DQ2 2970 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 CHD9Q3L8U1 2897 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 ANKHD1Q8IWZ3 2542 aaKnown RBP2.29□□□□□ -2.04
RFC4-205ENST00000418288 DDX60LQ5H9U9 1706 aaKnown RBP2.29□□□□□ -2.04
RFC4-205ENST00000418288 ANKARQ7Z5J8 1434 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 IL5P05113 134 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 GYPBP06028 91 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 PIRTP0C851 137 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 C1orf137Q5JT78 98 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 Q8N8P6 123 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 DYNLRB2Q8TF09 96 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 SPTSSAQ969W0 71 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 CYYR1Q96J86 154 aa2.29□□□□□ -2.04
RFC4-205ENST00000418288 USP9YO00507 2555 aaPredicted RBP2.29□□□□□ -2.04
RFC4-205ENST00000418288 ITPR2Q14571 2701 aa2.28□□□□□ -2.04
RFC4-205ENST00000418288 MED13LQ71F56 2210 aa2.28□□□□□ -2.04
RFC4-205ENST00000418288 CELSR1Q9NYQ6 3014 aa2.28□□□□□ -2.04
RFC4-205ENST00000418288 TMEM262E9PQX1 116 aa2.28□□□□□ -2.04
RFC4-205ENST00000418288 IGLV6-57P01721 117 aa2.28□□□□□ -2.04
RFC4-205ENST00000418288 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.28□□□□□ -2.04
RFC4-205ENST00000418288 NDUFA12Q9UI09 145 aa2.28□□□□□ -2.04
RFC4-205ENST00000418288 PRRC2AP48634 2157 aaKnown RBP2.27□□□□□ -2.05
RFC4-205ENST00000418288 KIAA1549LQ6ZVL6 1849 aa2.27□□□□□ -2.05
RFC4-205ENST00000418288 TCRBV3S1A0A5B6 114 aa2.27□□□□□ -2.05
RFC4-205ENST00000418288 KRTAP5-9P26371 169 aa2.27□□□□□ -2.05
RFC4-205ENST00000418288 C2orf82Q6UX34 121 aa2.27□□□□□ -2.05
RFC4-205ENST00000418288 SH2D6Q7Z4S9 175 aa2.27□□□□□ -2.05
RFC4-205ENST00000418288 AQP10Q96PS8 301 aa2.27□□□□□ -2.05
RFC4-205ENST00000418288 RTTNQ86VV8 2226 aa2.27□□□□□ -2.05
RFC4-205ENST00000418288 COL4A2P08572 1712 aa2.27□□□□□ -2.05
RFC4-205ENST00000418288 ZNF831Q5JPB2 1677 aa2.27□□□□□ -2.05
RFC4-205ENST00000418288 IQGAP3Q86VI3 1631 aa2.27□□□□□ -2.05
RFC4-205ENST00000418288 COL6A6A6NMZ7 2263 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 PHIPQ8WWQ0 1821 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 DOT1LQ8TEK3 1739 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 MPDZO75970 2070 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 NINQ8N4C6 2090 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 NIPBLQ6KC79 2804 aaeCLIP2.26□□□□□ -2.05
RFC4-205ENST00000418288 TRAV2A0A0B4J234 112 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 SDHAF1A6NFY7 115 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 NPC2P61916 151 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 INSL4Q14641 139 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 ELOBQ15370 118 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 IGFL1Q6UW32 110 aa2.26□□□□□ -2.05
RFC4-205ENST00000418288 C4orf33Q8N1A6 199 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms