RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 FAM222AQ5U5X8 452 aa4.1□□□□□ -1.75
NIFKP3-201ENST00000417799 RASL11AQ6T310 242 aa4.1□□□□□ -1.75
NIFKP3-201ENST00000417799 LINC00612Q8N6U2 182 aa4.1□□□□□ -1.75
NIFKP3-201ENST00000417799 FAM210BQ96KR6 192 aa4.1□□□□□ -1.75
NIFKP3-201ENST00000417799 C11orf68Q9H3H3 251 aaKnown RBP4.1□□□□□ -1.75
NIFKP3-201ENST00000417799 MRPL16Q9NX20 251 aaKnown RBP4.1□□□□□ -1.75
NIFKP3-201ENST00000417799 MUC4Q99102 2169 aa4.1□□□□□ -1.75
NIFKP3-201ENST00000417799 TRGV2A0A075B6R0 118 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 RPL37AP8A6NKH3 93 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 A8MWV9 139 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 RS1O15537 224 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 CRYGDP07320 174 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 DEFB130BP0DP73 79 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 DEFB130AP0DP74 79 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 EVI2AP22794 236 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 RAB4BP61018 213 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 COX19Q49B96 90 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 CFAP126Q5VTH2 177 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 SMIM15Q7Z3B0 74 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 C14orf178Q8N769 122 aaPredicted RBP4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 OR4C5Q8NGB2 326 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 AP1S3Q96PC3 154 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 TMEM191AQ9H0A3 160 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 CELA1Q9UNI1 258 aa4.09□□□□□ -1.75
NIFKP3-201ENST00000417799 TRAV4A0A0B4J268 109 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 SMIM17P0DL12 118 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 LINC00315P59091 139 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 DAD1P61803 113 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 FAM104BQ5XKR9 115 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 UFSP1Q6NVU6 142 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 ZFP2Q6ZN57 461 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 TMEM136Q6ZRR5 245 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 MEGF8Q7Z7M0 2845 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 POM121L12Q8N7R1 296 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 GATD1Q8NB37 220 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 C18orf15Q96N68 181 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 GNB1LQ9BYB4 327 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 SAMD10Q9BYL1 202 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 DPH3P1Q9H4G8 78 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 KIF25-AS1Q9Y6Z4 181 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 TENM3Q9P273 2699 aa4.08□□□□□ -1.76
NIFKP3-201ENST00000417799 IGHV3-73A0A0B4J1V6 119 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 IGHV3-53P01767 116 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 HLA-DQA1P01909 254 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 APCSP02743 223 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 MT-ND6P03923 174 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 MGPP08493 103 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 RAB4AP20338 218 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 RAB5AP20339 215 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 RPS10P46783 165 aaKnown RBP4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 C12orf74Q32Q52 190 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 FAM74A4Q5TZK3 123 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 AMN1Q8IY45 258 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 RNF185Q96GF1 192 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 TRAPPC1Q9Y5R8 145 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 U3KQK5 164 aa4.07□□□□□ -1.76
NIFKP3-201ENST00000417799 ATP5G1P05496 136 aa4.06□□□□□ -1.76
NIFKP3-201ENST00000417799 FABP9Q0Z7S8 132 aa4.06□□□□□ -1.76
NIFKP3-201ENST00000417799 SLAQ13239 276 aa4.06□□□□□ -1.76
NIFKP3-201ENST00000417799 MRPL51Q4U2R6 128 aaKnown RBP4.06□□□□□ -1.76
NIFKP3-201ENST00000417799 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.06□□□□□ -1.76
NIFKP3-201ENST00000417799 FRZBQ92765 325 aa4.06□□□□□ -1.76
NIFKP3-201ENST00000417799 TRAV26-2A0A0B4J265 109 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 TRGV4A0A0C4DH28 118 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 F5H768 121 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 H7C1H1 209 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 M0QY20 66 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 PPBPP02775 128 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 GATA1P15976 413 aaPredicted RBP4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 CKS2P33552 79 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 ZNF56Q15929 161 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 SLC25A29Q8N8R3 303 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 MRAP2Q96G30 205 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 EDA2RQ9HAV5 297 aa4.05□□□□□ -1.76
NIFKP3-201ENST00000417799 FBN3Q75N90 2809 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 STAB2Q8WWQ8 2551 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 TRBV6-4A0A1B0GX49 114 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 D6R8Y8 96 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 SMKR1H3BMG3 65 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 PHOX2AO14813 284 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 NCR2O95944 276 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 PPP1R17O96001 155 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 TRGC2P03986 189 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 HTN3P15516 51 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 ORMDL3Q8N138 153 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 PRELID3AQ96N28 172 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 PRO0255Q9UI72 69 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 HHLA3Q9XRX5 114 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 NACAE9PAV3 2078 aa4.04□□□□□ -1.76
NIFKP3-201ENST00000417799 DNAH9Q9NYC9 4486 aa4.03□□□□□ -1.76
NIFKP3-201ENST00000417799 HUWE1Q7Z6Z7 4374 aaKnown RBP4.03□□□□□ -1.76
NIFKP3-201ENST00000417799 TRAV26-1A0A087WT03 109 aa4.03□□□□□ -1.76
NIFKP3-201ENST00000417799 DEFB131BA0A096LNP1 70 aa4.03□□□□□ -1.76
NIFKP3-201ENST00000417799 TRAV10A0A0B4J240 114 aa4.03□□□□□ -1.76
NIFKP3-201ENST00000417799 TRBV10-1A0A0K0K1A3 114 aa4.03□□□□□ -1.76
NIFKP3-201ENST00000417799 P0DMU3 169 aa4.03□□□□□ -1.76
NIFKP3-201ENST00000417799 FAM231AP0DMU4 169 aa4.03□□□□□ -1.76
NIFKP3-201ENST00000417799 FAM231CP0DMU5 169 aa4.03□□□□□ -1.76
NIFKP3-201ENST00000417799 SRIP30626 198 aa4.03□□□□□ -1.76
NIFKP3-201ENST00000417799 CRYBA4P53673 196 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms