RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 TRBV6-4A0A1B0GX49 114 aa11.98□□□□□ -0.49
SSBP3-205ENST00000417664 CRYBA4P53673 196 aa11.98□□□□□ -0.49
SSBP3-205ENST00000417664 ANKRD39Q53RE8 183 aa11.98□□□□□ -0.49
SSBP3-205ENST00000417664 DLEU1O43261 78 aa11.97□□□□□ -0.49
SSBP3-205ENST00000417664 CTAG1AP78358 180 aa11.97□□□□□ -0.49
SSBP3-205ENST00000417664 DAZ4Q86SG3 579 aaKnown RBP11.97□□□□□ -0.49
SSBP3-205ENST00000417664 DAZ3Q9NR90 486 aaKnown RBP11.97□□□□□ -0.49
SSBP3-205ENST00000417664 ZC2HC1BQ5TFG8 222 aa11.97□□□□□ -0.49
SSBP3-205ENST00000417664 SLC25A29Q8N8R3 303 aa11.97□□□□□ -0.49
SSBP3-205ENST00000417664 ZNRF2Q8NHG8 242 aa11.97□□□□□ -0.49
SSBP3-205ENST00000417664 Q9UF83 564 aa11.97□□□□□ -0.49
SSBP3-205ENST00000417664 LYRM9A8MSI8 78 aa11.96□□□□□ -0.5
SSBP3-205ENST00000417664 DEFB104AQ8WTQ1 72 aa11.96□□□□□ -0.5
SSBP3-205ENST00000417664 SNHG12Q9BXW3 62 aa11.96□□□□□ -0.5
SSBP3-205ENST00000417664 CST9LQ9H4G1 147 aa11.96□□□□□ -0.5
SSBP3-205ENST00000417664 IGHV4-30-4P0DP06 118 aa11.95□□□□□ -0.5
SSBP3-205ENST00000417664 EGFEM1PQ0D2K5 195 aa11.95□□□□□ -0.5
SSBP3-205ENST00000417664 BOD1L2Q8IYS8 172 aa11.95□□□□□ -0.5
SSBP3-205ENST00000417664 C2orf88Q9BSF0 95 aa11.95□□□□□ -0.5
SSBP3-205ENST00000417664 SPANXA1Q9NS26 97 aa11.95□□□□□ -0.5
SSBP3-205ENST00000417664 TRGV4A0A0C4DH28 118 aa11.94□□□□□ -0.5
SSBP3-205ENST00000417664 CHCHD7Q9BUK0 85 aa11.94□□□□□ -0.5
SSBP3-205ENST00000417664 A8MZ25 164 aa11.94□□□□□ -0.5
SSBP3-205ENST00000417664 SIVA1O15304 175 aa11.94□□□□□ -0.5
SSBP3-205ENST00000417664 MIFP14174 115 aa11.94□□□□□ -0.5
SSBP3-205ENST00000417664 EMP1P54849 157 aa11.94□□□□□ -0.5
SSBP3-205ENST00000417664 UBE2D3P61077 147 aa11.94□□□□□ -0.5
SSBP3-205ENST00000417664 UBE2D2P62837 147 aa11.94□□□□□ -0.5
SSBP3-205ENST00000417664 DEFB135Q30KP9 77 aa11.94□□□□□ -0.5
SSBP3-205ENST00000417664 PRADC1Q9BSG0 188 aa11.94□□□□□ -0.5
SSBP3-205ENST00000417664 FGF6P10767 208 aa11.93□□□□□ -0.5
SSBP3-205ENST00000417664 IGLV4-3A0A075B6K6 122 aa11.92□□□□□ -0.5
SSBP3-205ENST00000417664 NMUP48645 174 aa11.92□□□□□ -0.5
SSBP3-205ENST00000417664 FHL2Q14192 279 aa11.92□□□□□ -0.5
SSBP3-205ENST00000417664 OXLD1Q5BKU9 147 aa11.92□□□□□ -0.5
SSBP3-205ENST00000417664 OR11H2Q8NH07 326 aa11.92□□□□□ -0.5
SSBP3-205ENST00000417664 PHLDA1Q8WV24 401 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-205ENST00000417664 TIMM21Q9BVV7 248 aa11.92□□□□□ -0.5
SSBP3-205ENST00000417664 VCX2Q9H322 139 aa11.92□□□□□ -0.5
SSBP3-205ENST00000417664 EREGO14944 169 aa11.91□□□□□ -0.5
SSBP3-205ENST00000417664 SMAGPQ0VAQ4 97 aa11.91□□□□□ -0.5
SSBP3-205ENST00000417664 RNF183Q96D59 192 aa11.91□□□□□ -0.5
SSBP3-205ENST00000417664 GTSF1LQ9H1H1 148 aa11.91□□□□□ -0.5
SSBP3-205ENST00000417664 IGLV4-69A0A075B6H9 119 aa11.91□□□□□ -0.5
SSBP3-205ENST00000417664 IGHV3-38A0A0C4DH36 116 aa11.91□□□□□ -0.5
SSBP3-205ENST00000417664 UBE2D4Q9Y2X8 147 aa11.91□□□□□ -0.5
SSBP3-205ENST00000417664 DEFB130BP0DP73 79 aa11.9□□□□□ -0.5
SSBP3-205ENST00000417664 DEFB130AP0DP74 79 aa11.9□□□□□ -0.5
SSBP3-205ENST00000417664 NFE4Q86UQ8 179 aa11.9□□□□□ -0.5
SSBP3-205ENST00000417664 AMELXQ99217 191 aa11.9□□□□□ -0.5
SSBP3-205ENST00000417664 TRRAPQ9Y4A5 3859 aa11.89□□□□□ -0.51
SSBP3-205ENST00000417664 GAGE12JA6NER3 117 aa11.89□□□□□ -0.51
SSBP3-205ENST00000417664 GAGE1Q13065 139 aa11.89□□□□□ -0.51
SSBP3-205ENST00000417664 GAGE4Q13068 117 aa11.89□□□□□ -0.51
SSBP3-205ENST00000417664 GAGE5Q13069 117 aa11.89□□□□□ -0.51
SSBP3-205ENST00000417664 GAGE13Q4V321 117 aa11.89□□□□□ -0.51
SSBP3-205ENST00000417664 FBN1P35555 2871 aaKnown RBP11.88□□□□□ -0.51
SSBP3-205ENST00000417664 HERVK_113P61574 105 aa11.88□□□□□ -0.51
SSBP3-205ENST00000417664 MRPS36P82909 103 aaKnown RBP11.88□□□□□ -0.51
SSBP3-205ENST00000417664 TMEM97Q5BJF2 176 aa11.88□□□□□ -0.51
SSBP3-205ENST00000417664 FAM222AQ5U5X8 452 aa11.88□□□□□ -0.51
SSBP3-205ENST00000417664 IGKV2D-26A0A0A0MRZ7 120 aa11.87□□□□□ -0.51
SSBP3-205ENST00000417664 IGHV4-28A0A0C4DH34 117 aa11.87□□□□□ -0.51
SSBP3-205ENST00000417664 C11orf86A6NJI1 115 aa11.87□□□□□ -0.51
SSBP3-205ENST00000417664 E9PLD3 99 aa11.87□□□□□ -0.51
SSBP3-205ENST00000417664 KRTAP10-11P60412 298 aa11.87□□□□□ -0.51
SSBP3-205ENST00000417664 C2orf91Q6ZV80 131 aa11.87□□□□□ -0.51
SSBP3-205ENST00000417664 PCP2Q8IVA1 136 aa11.87□□□□□ -0.51
SSBP3-205ENST00000417664 Q8NAQ8 132 aa11.87□□□□□ -0.51
SSBP3-205ENST00000417664 CSDC2Q9Y534 153 aaKnown RBP11.87□□□□□ -0.51
SSBP3-205ENST00000417664 OPRPNQ99935 248 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-205ENST00000417664 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-205ENST00000417664 IGKV2-29A2NJV5 120 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-205ENST00000417664 H7C423 109 aa11.86□□□□□ -0.51
SSBP3-205ENST00000417664 COL5A1-AS1Q5SY13 56 aa11.86□□□□□ -0.51
SSBP3-205ENST00000417664 HIGD1BQ9P298 99 aa11.86□□□□□ -0.51
SSBP3-205ENST00000417664 PRO0255Q9UI72 69 aa11.86□□□□□ -0.51
SSBP3-205ENST00000417664 TEX48A0A1B0GUV7 120 aa11.85□□□□□ -0.51
SSBP3-205ENST00000417664 LINC00694P0DN24 101 aa11.85□□□□□ -0.51
SSBP3-205ENST00000417664 TCTAP57738 103 aa11.85□□□□□ -0.51
SSBP3-205ENST00000417664 FAM104AQ969W3 186 aa11.85□□□□□ -0.51
SSBP3-205ENST00000417664 TP73-AS1Q9UF72 201 aa11.85□□□□□ -0.51
SSBP3-205ENST00000417664 DGAT2L7PQ6IED9 249 aa11.84□□□□□ -0.51
SSBP3-205ENST00000417664 NTM-AS1Q6ZSK4 140 aa11.84□□□□□ -0.51
SSBP3-205ENST00000417664 SPART-AS1P0CW21 52 aa11.84□□□□□ -0.51
SSBP3-205ENST00000417664 HINT1P49773 126 aaPredicted RBP11.84□□□□□ -0.51
SSBP3-205ENST00000417664 BATFQ16520 125 aa11.84□□□□□ -0.51
SSBP3-205ENST00000417664 SBSPONQ8IVN8 264 aa11.84□□□□□ -0.51
SSBP3-205ENST00000417664 TMEM243Q9BU79 118 aa11.84□□□□□ -0.51
SSBP3-205ENST00000417664 CHAC1Q9BUX1 264 aa11.84□□□□□ -0.51
SSBP3-205ENST00000417664 TRBV25-1A0A075B6N4 114 aa11.83□□□□□ -0.52
SSBP3-205ENST00000417664 DAD1P61803 113 aa11.83□□□□□ -0.52
SSBP3-205ENST00000417664 MPV17L2Q567V2 206 aa11.83□□□□□ -0.52
SSBP3-205ENST00000417664 TMEM170BQ5T4T1 132 aa11.83□□□□□ -0.52
SSBP3-205ENST00000417664 TRAV8-6A0A0B4J262 113 aa11.82□□□□□ -0.52
SSBP3-205ENST00000417664 LOC100131303A0A0U1RQF7 123 aa11.82□□□□□ -0.52
SSBP3-205ENST00000417664 CEMP1Q6PRD7 247 aaPredicted RBP11.82□□□□□ -0.52
SSBP3-205ENST00000417664 STAB1Q9NY15 2570 aa11.82□□□□□ -0.52
SSBP3-205ENST00000417664 HSD52Q0P140 79 aa11.81□□□□□ -0.52
SSBP3-205ENST00000417664 TINCRA0A1B0GVN0 87 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms