RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 UBE2L3P68036 154 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 RPL18Q07020 188 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 RSPO1Q2MKA7 263 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 SP6Q3SY56 376 aa4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 C9orf47Q6ZRZ4 202 aa4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 Q8N7P7 452 aa4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 UBE2WQ96B02 151 aa4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 UPK3BQ9BT76 320 aa4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 CTSZQ9UBR2 303 aa4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 DYNC1H1Q14204 4646 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 AGRNO00468 2067 aa4.04□□□□□ -1.76
ECHDC1-206ENST00000417628 IGKV1D-8A0A087WSZ0 117 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 TRBV7-6A0A0J9YX20 115 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 H7C1H1 209 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 CHEK1O14757 476 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 BCE1O60756 84 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 IGLV3-1P01715 115 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 ARL14EPLP0DKL9 152 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 KRTAP27-1Q3LI81 207 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 GDF5OSQ5U4N7 250 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 HMGN2P46Q86SG4 172 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 PRR15Q8IV56 129 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 PCP2Q8IVA1 136 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 EXOC3-AS1Q8N2X6 119 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 SERP2Q8N6R1 65 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 FGFBP3Q8TAT2 258 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 CHCHD5Q9BSY4 110 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 RNF7Q9UBF6 113 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 PKIGQ9Y2B9 76 aa4.03□□□□□ -1.76
ECHDC1-206ENST00000417628 HMCN2Q8NDA2 5059 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 A0A096LNJ9 63 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 TRBV10-2A0A0K0K1G8 114 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 PGPA6NDG6 321 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 A6NDX4 124 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 GATA1P15976 413 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 CA6P23280 308 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 Q5VSD8 79 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 KLF14Q8TD94 323 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 NABP1Q96AH0 204 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 FAM19A4Q96LR4 140 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 CALYQ9NYX4 217 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 GNG12Q9UBI6 72 aa4.02□□□□□ -1.77
ECHDC1-206ENST00000417628 RNF213Q63HN8 5207 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 TRBV6-6A0A0A6YYG2 114 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 SRRM4A7MD48 611 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 H3BSH0 61 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 TCL1BO95988 128 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 IGF1P05019 195 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 P0C879 139 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 CACNG7P62955 275 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 RPL18AQ02543 176 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 LINC00527Q9UJ94 153 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 HHLA3Q9XRX5 114 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 F11RQ9Y624 299 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 SELENOKQ9Y6D0 94 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 FAT2Q9NYQ8 4349 aa4.01□□□□□ -1.77
ECHDC1-206ENST00000417628 IGKV1D-42A0A075B6H8 117 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 TRBV19A0A075B6N1 114 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 TRAV26-2A0A0B4J265 109 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 TRBV6-1A0A0K0K1D8 114 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 HIGD1CA8MV81 97 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 C12orf77C9JDV5 145 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 H3BP45 60 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 PATE4P0C8F1 98 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 PLNP26678 52 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 PSMB2P49721 201 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 FXYD4P59646 89 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 ATXN8Q156A1 80 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 MRGPRG-AS1Q2M3A8 158 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 DEFB136Q30KP8 78 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 FAM104BQ5XKR9 115 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 Q6ZR03 302 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 LINC00311Q8N616 119 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 CYYR1Q96J86 154 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 C17orf77Q96MU5 243 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 HIST1H4GQ99525 98 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
ECHDC1-206ENST00000417628 RPP21Q9H633 154 aaKnown RBP4□□□□□ -1.77
ECHDC1-206ENST00000417628 SRRM2Q9UQ35 2752 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 IGHV4OR15-8A0A075B7B6 117 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 A0A0B4J2C4 111 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 NCBP2LA6PVI3 153 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 LTAP01374 205 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 APOHP02749 345 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 KISS1Q15726 138 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 SPANXN5Q5MJ07 72 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 DAND5Q8N907 189 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 THAP8Q8NA92 274 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 LY6G5BQ8NDX9 201 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 METTL26Q96S19 204 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 DPH3P1Q9H4G8 78 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 NXT2Q9NPJ8 142 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 AMMECR1Q9Y4X0 333 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 MYCBP2O75592 4640 aa3.99□□□□□ -1.77
ECHDC1-206ENST00000417628 TRAV12-1A0A0B4J245 112 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 A0A0G2JRQ6 117 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 hADV29S1A0JD25 119 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 LINC01549A6NIU2 74 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms