RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DAZ4Q86SG3 579 aaKnown RBP11.97□□□□□ -0.49
VCP-202ENST00000417448 DNAJC30Q96LL9 226 aa11.97□□□□□ -0.49
VCP-202ENST00000417448 DAZ3Q9NR90 486 aaKnown RBP11.97□□□□□ -0.49
VCP-202ENST00000417448 A0A087WWC5 75 aa11.96□□□□□ -0.49
VCP-202ENST00000417448 TRBV6-8A0A0A6YYG3 113 aa11.96□□□□□ -0.49
VCP-202ENST00000417448 PPP1R2P9O14990 202 aa11.96□□□□□ -0.49
VCP-202ENST00000417448 LINC01556Q5JQF7 62 aa11.96□□□□□ -0.49
VCP-202ENST00000417448 SEC11CQ9BY50 192 aa11.96□□□□□ -0.49
VCP-202ENST00000417448 TRAV9-2A0A087WT02 112 aa11.95□□□□□ -0.5
VCP-202ENST00000417448 IGLV5-52A0A0A0MRZ9 124 aa11.95□□□□□ -0.5
VCP-202ENST00000417448 PLA2G1BP04054 148 aaKnown RBP11.95□□□□□ -0.5
VCP-202ENST00000417448 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
VCP-202ENST00000417448 ANAPC16Q96DE5 110 aa11.95□□□□□ -0.5
VCP-202ENST00000417448 Q9HAA7 133 aa11.95□□□□□ -0.5
VCP-202ENST00000417448 TMEM262E9PQX1 116 aa11.94□□□□□ -0.5
VCP-202ENST00000417448 MRPL51Q4U2R6 128 aaKnown RBP11.94□□□□□ -0.5
VCP-202ENST00000417448 NIT1Q86X76 327 aa11.94□□□□□ -0.5
VCP-202ENST00000417448 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
VCP-202ENST00000417448 A0A1B0GXF2 115 aa11.93□□□□□ -0.5
VCP-202ENST00000417448 GAGE6Q13070 117 aa11.93□□□□□ -0.5
VCP-202ENST00000417448 LINC00528Q8N1L1 170 aa11.93□□□□□ -0.5
VCP-202ENST00000417448 C10orf91Q5T1B1 145 aa11.92□□□□□ -0.5
VCP-202ENST00000417448 FAM104BQ5XKR9 115 aa11.92□□□□□ -0.5
VCP-202ENST00000417448 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.92□□□□□ -0.5
VCP-202ENST00000417448 HBBP68871 147 aa11.91□□□□□ -0.5
VCP-202ENST00000417448 KLK12Q9UKR0 248 aa11.91□□□□□ -0.5
VCP-202ENST00000417448 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
VCP-202ENST00000417448 IBA57-AS1B1ANH7 110 aa11.9□□□□□ -0.5
VCP-202ENST00000417448 MPV17L2Q567V2 206 aa11.9□□□□□ -0.5
VCP-202ENST00000417448 Q8N976 141 aa11.9□□□□□ -0.5
VCP-202ENST00000417448 URGCP-MRPS24S4R325 110 aa11.9□□□□□ -0.5
VCP-202ENST00000417448 RNF213Q63HN8 5207 aa11.89□□□□□ -0.51
VCP-202ENST00000417448 A0A087WX48 190 aa11.89□□□□□ -0.51
VCP-202ENST00000417448 IGHV1-24A0A0C4DH33 117 aa11.89□□□□□ -0.51
VCP-202ENST00000417448 C7orf77A4D0Y5 90 aa11.89□□□□□ -0.51
VCP-202ENST00000417448 LRCOL1A6NCL2 159 aa11.89□□□□□ -0.51
VCP-202ENST00000417448 ATRAIDQ6UW56 229 aa11.89□□□□□ -0.51
VCP-202ENST00000417448 SLC7A5P1Q8MH63 180 aa11.89□□□□□ -0.51
VCP-202ENST00000417448 NRACQ8N912 160 aa11.89□□□□□ -0.51
VCP-202ENST00000417448 NTN5Q8WTR8 489 aaPredicted RBP11.89□□□□□ -0.51
VCP-202ENST00000417448 MRAP2Q96G30 205 aa11.89□□□□□ -0.51
VCP-202ENST00000417448 CARHSP1Q9Y2V2 147 aaKnown RBP11.89□□□□□ -0.51
VCP-202ENST00000417448 TRBV25-1A0A075B6N4 114 aa11.88□□□□□ -0.51
VCP-202ENST00000417448 A0A1B0GW15 77 aa11.88□□□□□ -0.51
VCP-202ENST00000417448 COTL1Q14019 142 aa11.88□□□□□ -0.51
VCP-202ENST00000417448 C10orf126Q8N4M7 172 aa11.88□□□□□ -0.51
VCP-202ENST00000417448 CLRN3Q8NCR9 226 aa11.88□□□□□ -0.51
VCP-202ENST00000417448 ST20Q9HBF5 79 aa11.88□□□□□ -0.51
VCP-202ENST00000417448 APOC3P02656 99 aa11.87□□□□□ -0.51
VCP-202ENST00000417448 PMCHP20382 165 aa11.87□□□□□ -0.51
VCP-202ENST00000417448 AMTP48728 403 aa11.87□□□□□ -0.51
VCP-202ENST00000417448 KRTAP10-4P60372 401 aaPredicted RBP11.87□□□□□ -0.51
VCP-202ENST00000417448 IQCJQ1A5X6 159 aa11.87□□□□□ -0.51
VCP-202ENST00000417448 TMEM97Q5BJF2 176 aa11.87□□□□□ -0.51
VCP-202ENST00000417448 KCNIP4Q6PIL6 250 aa11.87□□□□□ -0.51
VCP-202ENST00000417448 RPS10P5Q9NQ39 176 aa11.87□□□□□ -0.51
VCP-202ENST00000417448 TRBV6-5A0A0K0K1A5 114 aa11.86□□□□□ -0.51
VCP-202ENST00000417448 D6R8Y8 96 aa11.86□□□□□ -0.51
VCP-202ENST00000417448 CKS2P33552 79 aa11.86□□□□□ -0.51
VCP-202ENST00000417448 RBX1P62877 108 aa11.86□□□□□ -0.51
VCP-202ENST00000417448 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
VCP-202ENST00000417448 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
VCP-202ENST00000417448 CTDSP1Q9GZU7 261 aa11.86□□□□□ -0.51
VCP-202ENST00000417448 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
VCP-202ENST00000417448 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.85□□□□□ -0.51
VCP-202ENST00000417448 IGKV2-29A2NJV5 120 aaPredicted RBP11.85□□□□□ -0.51
VCP-202ENST00000417448 OXTP01178 125 aa11.85□□□□□ -0.51
VCP-202ENST00000417448 TSHBP01222 138 aa11.85□□□□□ -0.51
VCP-202ENST00000417448 ANGP03950 147 aaKnown RBP11.85□□□□□ -0.51
VCP-202ENST00000417448 S100A8P05109 93 aa11.85□□□□□ -0.51
VCP-202ENST00000417448 POLR2KP53803 58 aaKnown RBP11.85□□□□□ -0.51
VCP-202ENST00000417448 CLPSL2Q6UWE3 100 aa11.85□□□□□ -0.51
VCP-202ENST00000417448 Q6ZSA8 131 aa11.85□□□□□ -0.51
VCP-202ENST00000417448 ATP5L2Q7Z4Y8 100 aa11.85□□□□□ -0.51
VCP-202ENST00000417448 BTF3L4Q96K17 158 aa11.85□□□□□ -0.51
VCP-202ENST00000417448 PKHD1L1Q86WI1 4243 aa11.84□□□□□ -0.51
VCP-202ENST00000417448 I3L3M4 83 aa11.84□□□□□ -0.51
VCP-202ENST00000417448 K7EP13 123 aa11.84□□□□□ -0.51
VCP-202ENST00000417448 Q8N814 137 aa11.84□□□□□ -0.51
VCP-202ENST00000417448 IGLV4-60A0A075B6I1 120 aa11.83□□□□□ -0.52
VCP-202ENST00000417448 NPYP01303 97 aa11.83□□□□□ -0.52
VCP-202ENST00000417448 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
VCP-202ENST00000417448 TNFRSF6BO95407 300 aa11.82□□□□□ -0.52
VCP-202ENST00000417448 APCSP02743 223 aa11.82□□□□□ -0.52
VCP-202ENST00000417448 SUMO2P61956 95 aaKnown RBP11.82□□□□□ -0.52
VCP-202ENST00000417448 IMMP2LQ96T52 175 aa11.82□□□□□ -0.52
VCP-202ENST00000417448 CHCHD7Q9BUK0 85 aa11.82□□□□□ -0.52
VCP-202ENST00000417448 UBE2L6O14933 153 aa11.81□□□□□ -0.52
VCP-202ENST00000417448 PSCAO43653 123 aa11.81□□□□□ -0.52
VCP-202ENST00000417448 TMEM136Q6ZRR5 245 aa11.81□□□□□ -0.52
VCP-202ENST00000417448 LINC00269Q8N2A0 174 aa11.81□□□□□ -0.52
VCP-202ENST00000417448 LRP2P98164 4655 aa11.81□□□□□ -0.52
VCP-202ENST00000417448 IGKV2D-24A0A075B6R9 120 aa11.8□□□□□ -0.52
VCP-202ENST00000417448 LAGE3Q14657 143 aa11.8□□□□□ -0.52
VCP-202ENST00000417448 RHEBQ15382 184 aa11.8□□□□□ -0.52
VCP-202ENST00000417448 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
VCP-202ENST00000417448 C20orf203Q8NBC4 194 aa11.8□□□□□ -0.52
VCP-202ENST00000417448 TRAV8-3A0A0A6YYJ7 113 aa11.79□□□□□ -0.52
VCP-202ENST00000417448 TRBV27A0A0K0K1C4 114 aa11.79□□□□□ -0.52
VCP-202ENST00000417448 VCYO14598 125 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms