RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 DNAJC30Q96LL9 226 aa12.89□□□□□ -0.35
RTN4R-202ENST00000416372 SIVA1O15304 175 aa12.89□□□□□ -0.35
RTN4R-202ENST00000416372 ANKRD39Q53RE8 183 aa12.89□□□□□ -0.35
RTN4R-202ENST00000416372 BOD1L2Q8IYS8 172 aa12.89□□□□□ -0.35
RTN4R-202ENST00000416372 TOMM6Q96B49 74 aa12.89□□□□□ -0.35
RTN4R-202ENST00000416372 Q9UF83 564 aa12.89□□□□□ -0.35
RTN4R-202ENST00000416372 PKD1L1Q8TDX9 2849 aa12.88□□□□□ -0.35
RTN4R-202ENST00000416372 CIDEAO60543 219 aa12.88□□□□□ -0.35
RTN4R-202ENST00000416372 SEC11AP67812 179 aa12.88□□□□□ -0.35
RTN4R-202ENST00000416372 C2orf66Q6UXQ4 117 aa12.88□□□□□ -0.35
RTN4R-202ENST00000416372 RNF183Q96D59 192 aa12.88□□□□□ -0.35
RTN4R-202ENST00000416372 TSHBP01222 138 aa12.87□□□□□ -0.35
RTN4R-202ENST00000416372 SAMD5Q5TGI4 173 aa12.87□□□□□ -0.35
RTN4R-202ENST00000416372 SCGB3A1Q96QR1 104 aa12.87□□□□□ -0.35
RTN4R-202ENST00000416372 A8MZ25 164 aa12.86□□□□□ -0.35
RTN4R-202ENST00000416372 K7EQD1 137 aa12.86□□□□□ -0.35
RTN4R-202ENST00000416372 PRSS1P07477 247 aa12.86□□□□□ -0.35
RTN4R-202ENST00000416372 DEFB130BP0DP73 79 aa12.86□□□□□ -0.35
RTN4R-202ENST00000416372 DEFB130AP0DP74 79 aa12.86□□□□□ -0.35
RTN4R-202ENST00000416372 RHOHQ15669 191 aa12.86□□□□□ -0.35
RTN4R-202ENST00000416372 Q6ZVH6 145 aa12.86□□□□□ -0.35
RTN4R-202ENST00000416372 CYSLTR1Q9Y271 337 aa12.86□□□□□ -0.35
RTN4R-202ENST00000416372 IGHV4-28A0A0C4DH34 117 aa12.86□□□□□ -0.35
RTN4R-202ENST00000416372 TRGV4A0A0C4DH28 118 aa12.85□□□□□ -0.35
RTN4R-202ENST00000416372 LINC01549A6NIU2 74 aa12.85□□□□□ -0.35
RTN4R-202ENST00000416372 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.85□□□□□ -0.35
RTN4R-202ENST00000416372 MIFP14174 115 aa12.85□□□□□ -0.35
RTN4R-202ENST00000416372 TMEM97Q5BJF2 176 aa12.85□□□□□ -0.35
RTN4R-202ENST00000416372 LINC00612Q8N6U2 182 aa12.85□□□□□ -0.35
RTN4R-202ENST00000416372 ZMAT4Q9H898 229 aa12.85□□□□□ -0.35
RTN4R-202ENST00000416372 TRBV10-1A0A0K0K1A3 114 aa12.84□□□□□ -0.35
RTN4R-202ENST00000416372 SLC25A29Q8N8R3 303 aa12.84□□□□□ -0.35
RTN4R-202ENST00000416372 TP53TG1Q9Y2A0 90 aa12.84□□□□□ -0.35
RTN4R-202ENST00000416372 NBEAL2Q6ZNJ1 2754 aa12.84□□□□□ -0.35
RTN4R-202ENST00000416372 LYRM9A8MSI8 78 aa12.84□□□□□ -0.35
RTN4R-202ENST00000416372 DEFB4AO15263 64 aa12.84□□□□□ -0.35
RTN4R-202ENST00000416372 VAMP3Q15836 100 aa12.84□□□□□ -0.35
RTN4R-202ENST00000416372 FAM222AQ5U5X8 452 aa12.84□□□□□ -0.35
RTN4R-202ENST00000416372 ZNRF2Q8NHG8 242 aa12.84□□□□□ -0.35
RTN4R-202ENST00000416372 RPL36AP83881 106 aaKnown RBP12.83□□□□□ -0.36
RTN4R-202ENST00000416372 HSD52Q0P140 79 aa12.83□□□□□ -0.36
RTN4R-202ENST00000416372 ERASQ7Z444 233 aa12.83□□□□□ -0.36
RTN4R-202ENST00000416372 Q8NAQ8 132 aa12.83□□□□□ -0.36
RTN4R-202ENST00000416372 RPL36ALQ969Q0 106 aaKnown RBP12.83□□□□□ -0.36
RTN4R-202ENST00000416372 TRBV7-3A0A075B6L6 115 aa12.82□□□□□ -0.36
RTN4R-202ENST00000416372 K7EP13 123 aa12.82□□□□□ -0.36
RTN4R-202ENST00000416372 RPL39P62891 51 aaKnown RBP12.82□□□□□ -0.36
RTN4R-202ENST00000416372 ODF1Q14990 250 aa12.82□□□□□ -0.36
RTN4R-202ENST00000416372 PHLDA1Q8WV24 401 aaPredicted RBP12.82□□□□□ -0.36
RTN4R-202ENST00000416372 TRBV6-4A0A1B0GX49 114 aa12.81□□□□□ -0.36
RTN4R-202ENST00000416372 FHL2Q14192 279 aa12.81□□□□□ -0.36
RTN4R-202ENST00000416372 DKK2Q9UBU2 259 aa12.81□□□□□ -0.36
RTN4R-202ENST00000416372 IGHV3-38A0A0C4DH36 116 aa12.81□□□□□ -0.36
RTN4R-202ENST00000416372 C20orf203Q8NBC4 194 aa12.81□□□□□ -0.36
RTN4R-202ENST00000416372 A6NDN8 102 aa12.8□□□□□ -0.36
RTN4R-202ENST00000416372 GAGE12JA6NER3 117 aa12.8□□□□□ -0.36
RTN4R-202ENST00000416372 GAGE4Q13068 117 aa12.8□□□□□ -0.36
RTN4R-202ENST00000416372 GAGE5Q13069 117 aa12.8□□□□□ -0.36
RTN4R-202ENST00000416372 COTL1Q14019 142 aa12.8□□□□□ -0.36
RTN4R-202ENST00000416372 GAGE13Q4V321 117 aa12.8□□□□□ -0.36
RTN4R-202ENST00000416372 CBY1Q9Y3M2 126 aa12.79□□□□□ -0.36
RTN4R-202ENST00000416372 TRAV12-1A0A0B4J245 112 aa12.79□□□□□ -0.36
RTN4R-202ENST00000416372 IGIPA6NJ69 53 aa12.79□□□□□ -0.36
RTN4R-202ENST00000416372 IGKCP01834 107 aa12.79□□□□□ -0.36
RTN4R-202ENST00000416372 TMEM141Q96I45 108 aa12.79□□□□□ -0.36
RTN4R-202ENST00000416372 PRADC1Q9BSG0 188 aa12.79□□□□□ -0.36
RTN4R-202ENST00000416372 H3BRM9 83 aa12.78□□□□□ -0.36
RTN4R-202ENST00000416372 HIGD1BQ9P298 99 aa12.78□□□□□ -0.36
RTN4R-202ENST00000416372 A0A087WX48 190 aa12.77□□□□□ -0.36
RTN4R-202ENST00000416372 DPM2O94777 84 aa12.77□□□□□ -0.36
RTN4R-202ENST00000416372 NMUP48645 174 aa12.77□□□□□ -0.36
RTN4R-202ENST00000416372 UBE2D3P61077 147 aa12.77□□□□□ -0.36
RTN4R-202ENST00000416372 DAD1P61803 113 aa12.77□□□□□ -0.36
RTN4R-202ENST00000416372 UBE2D2P62837 147 aa12.77□□□□□ -0.36
RTN4R-202ENST00000416372 DAZ4Q86SG3 579 aaKnown RBP12.77□□□□□ -0.36
RTN4R-202ENST00000416372 BAALCQ8WXS3 180 aa12.77□□□□□ -0.36
RTN4R-202ENST00000416372 TIMM17AQ99595 171 aa12.77□□□□□ -0.36
RTN4R-202ENST00000416372 RETNQ9HD89 108 aa12.77□□□□□ -0.36
RTN4R-202ENST00000416372 DAZ3Q9NR90 486 aaKnown RBP12.77□□□□□ -0.36
RTN4R-202ENST00000416372 HHLA3Q9XRX5 114 aa12.77□□□□□ -0.36
RTN4R-202ENST00000416372 LOC100131303A0A0U1RQF7 123 aa12.76□□□□□ -0.37
RTN4R-202ENST00000416372 SPART-AS1P0CW21 52 aa12.76□□□□□ -0.37
RTN4R-202ENST00000416372 CMYA5Q8N3K9 4069 aa12.76□□□□□ -0.37
RTN4R-202ENST00000416372 CHCHD7Q9BUK0 85 aa12.76□□□□□ -0.37
RTN4R-202ENST00000416372 CELA1Q9UNI1 258 aa12.76□□□□□ -0.37
RTN4R-202ENST00000416372 PRB2P02812 416 aaPredicted RBP12.75□□□□□ -0.37
RTN4R-202ENST00000416372 PCP2Q8IVA1 136 aa12.75□□□□□ -0.37
RTN4R-202ENST00000416372 MRPL35Q9NZE8 188 aaKnown RBP12.75□□□□□ -0.37
RTN4R-202ENST00000416372 AMMECR1LQ6DCA0 310 aa12.74□□□□□ -0.37
RTN4R-202ENST00000416372 C9orf118A6NHY6 69 aa12.74□□□□□ -0.37
RTN4R-202ENST00000416372 CHTOPQ9Y3Y2 248 aaKnown RBP12.74□□□□□ -0.37
RTN4R-202ENST00000416372 ANK2Q01484 3957 aa12.73□□□□□ -0.37
RTN4R-202ENST00000416372 PRSS29PA6NIE9 313 aa12.73□□□□□ -0.37
RTN4R-202ENST00000416372 PRO0255Q9UI72 69 aa12.73□□□□□ -0.37
RTN4R-202ENST00000416372 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.72□□□□□ -0.37
RTN4R-202ENST00000416372 TRAV8-6A0A0B4J262 113 aa12.72□□□□□ -0.37
RTN4R-202ENST00000416372 IGKV2-29A2NJV5 120 aaPredicted RBP12.72□□□□□ -0.37
RTN4R-202ENST00000416372 PLNP26678 52 aa12.72□□□□□ -0.37
RTN4R-202ENST00000416372 CRYBA4P53673 196 aa12.72□□□□□ -0.37
RTN4R-202ENST00000416372 PMVKQ15126 192 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms